RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 JADE3Q92613 823 aa6.54□□□□□ -1.36
PRPF38A-203ENST00000487160 TEKT5Q96M29 485 aa6.54□□□□□ -1.36
PRPF38A-203ENST00000487160 DIRC2Q96SL1 478 aa6.54□□□□□ -1.36
PRPF38A-203ENST00000487160 PRDM12Q9H4Q4 367 aa6.54□□□□□ -1.36
PRPF38A-203ENST00000487160 CNTD2Q9H8S5 307 aa6.54□□□□□ -1.36
PRPF38A-203ENST00000487160 KCNK12Q9HB15 430 aa6.54□□□□□ -1.36
PRPF38A-203ENST00000487160 GEMIN8Q9NWZ8 242 aaKnown RBP6.54□□□□□ -1.36
PRPF38A-203ENST00000487160 INVSQ9Y283 1065 aa6.54□□□□□ -1.36
PRPF38A-203ENST00000487160 ANKRD6Q9Y2G4 727 aa6.54□□□□□ -1.36
PRPF38A-203ENST00000487160 CARMIL2Q6F5E8 1435 aa6.53□□□□□ -1.36
PRPF38A-203ENST00000487160 MYOCOSA0A1B0GUC4 107 aa6.53□□□□□ -1.36
PRPF38A-203ENST00000487160 OSMP13725 252 aa6.53□□□□□ -1.36
PRPF38A-203ENST00000487160 ITGB5P18084 799 aa6.53□□□□□ -1.36
PRPF38A-203ENST00000487160 ATF3P18847 181 aa6.53□□□□□ -1.36
PRPF38A-203ENST00000487160 AGXTP21549 392 aa6.53□□□□□ -1.36
PRPF38A-203ENST00000487160 ECE1P42892 770 aa6.53□□□□□ -1.36
PRPF38A-203ENST00000487160 MTNR1BP49286 362 aa6.53□□□□□ -1.36
PRPF38A-203ENST00000487160 TCIRG1Q13488 830 aa6.53□□□□□ -1.36
PRPF38A-203ENST00000487160 MLC1Q15049 377 aa6.53□□□□□ -1.36
PRPF38A-203ENST00000487160 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.53□□□□□ -1.36
PRPF38A-203ENST00000487160 SKIDA1Q1XH10 827 aa6.53□□□□□ -1.36
PRPF38A-203ENST00000487160 PHF19Q5T6S3 580 aa6.53□□□□□ -1.36
PRPF38A-203ENST00000487160 KIAA1841Q6NSI8 718 aa6.53□□□□□ -1.36
PRPF38A-203ENST00000487160 PRR23BQ6ZRT6 265 aa6.53□□□□□ -1.36
PRPF38A-203ENST00000487160 KCNK18Q7Z418 384 aa6.53□□□□□ -1.36
PRPF38A-203ENST00000487160 STK32CQ86UX6 486 aa6.53□□□□□ -1.36
PRPF38A-203ENST00000487160 TCEAL8Q8IYN2 117 aa6.53□□□□□ -1.36
PRPF38A-203ENST00000487160 TTC8Q8TAM2 541 aa6.53□□□□□ -1.36
PRPF38A-203ENST00000487160 CCDC136Q96JN2 1154 aa6.53□□□□□ -1.36
PRPF38A-203ENST00000487160 SLC2A13Q96QE2 648 aa6.53□□□□□ -1.36
PRPF38A-203ENST00000487160 RNF38Q9H0F5 515 aa6.53□□□□□ -1.36
PRPF38A-203ENST00000487160 NSUN3Q9H649 340 aaKnown RBP6.53□□□□□ -1.36
PRPF38A-203ENST00000487160 TMPRSS11EQ9UL52 423 aa6.53□□□□□ -1.36
PRPF38A-203ENST00000487160 GIT1Q9Y2X7 761 aa6.53□□□□□ -1.36
PRPF38A-203ENST00000487160 PCDHA5Q9Y5H7 936 aa6.53□□□□□ -1.36
PRPF38A-203ENST00000487160 GPR45Q9Y5Y3 372 aa6.53□□□□□ -1.36
PRPF38A-203ENST00000487160 ST20-MTHFSA0A0A6YYL1 179 aa6.52□□□□□ -1.37
PRPF38A-203ENST00000487160 CYP2C8P10632 490 aa6.52□□□□□ -1.37
PRPF38A-203ENST00000487160 GLRBP48167 497 aa6.52□□□□□ -1.37
PRPF38A-203ENST00000487160 CDR1P51861 262 aa6.52□□□□□ -1.37
PRPF38A-203ENST00000487160 LGALS4P56470 323 aa6.52□□□□□ -1.37
PRPF38A-203ENST00000487160 TARBP2Q15633 366 aaKnown RBP6.52□□□□□ -1.37
PRPF38A-203ENST00000487160 NXNQ6DKJ4 435 aa6.52□□□□□ -1.37
PRPF38A-203ENST00000487160 MAGEB6Q8N7X4 407 aa6.52□□□□□ -1.37
PRPF38A-203ENST00000487160 DTX3Q8N9I9 347 aa6.52□□□□□ -1.37
PRPF38A-203ENST00000487160 SMARCC2Q8TAQ2 1214 aa6.52□□□□□ -1.37
PRPF38A-203ENST00000487160 HSPBAP1Q96EW2 488 aa6.52□□□□□ -1.37
PRPF38A-203ENST00000487160 RAX2Q96IS3 184 aa6.52□□□□□ -1.37
PRPF38A-203ENST00000487160 WNT8AQ9H1J5 351 aa6.52□□□□□ -1.37
PRPF38A-203ENST00000487160 KCTD10Q9H3F6 313 aa6.52□□□□□ -1.37
PRPF38A-203ENST00000487160 DCP1AQ9NPI6 582 aaPredicted RBP6.52□□□□□ -1.37
PRPF38A-203ENST00000487160 DLL4Q9NR61 685 aa6.52□□□□□ -1.37
PRPF38A-203ENST00000487160 ZNF277Q9NRM2 450 aaPredicted RBP6.52□□□□□ -1.37
PRPF38A-203ENST00000487160 ARHGAP20Q9P2F6 1191 aa6.52□□□□□ -1.37
PRPF38A-203ENST00000487160 GABBR1Q9UBS5 961 aa6.52□□□□□ -1.37
PRPF38A-203ENST00000487160 MBD1Q9UIS9 605 aaPredicted RBP6.52□□□□□ -1.37
PRPF38A-203ENST00000487160 PNMA8BQ9ULN7 279 aaPredicted RBP6.52□□□□□ -1.37
PRPF38A-203ENST00000487160 NUMBLQ9Y6R0 609 aa6.52□□□□□ -1.37
PRPF38A-203ENST00000487160 MYPNQ86TC9 1320 aa6.51□□□□□ -1.37
PRPF38A-203ENST00000487160 PEX10O60683 326 aa6.51□□□□□ -1.37
PRPF38A-203ENST00000487160 PCDH8O95206 1070 aa6.51□□□□□ -1.37
PRPF38A-203ENST00000487160 ZRANB2O95218 330 aaKnown RBP eCLIP6.51□□□□□ -1.37
PRPF38A-203ENST00000487160 IL33O95760 270 aa6.51□□□□□ -1.37
PRPF38A-203ENST00000487160 PFKMP08237 780 aa6.51□□□□□ -1.37
PRPF38A-203ENST00000487160 TBX4P57082 545 aa6.51□□□□□ -1.37
PRPF38A-203ENST00000487160 MRPS9P82933 396 aaKnown RBP6.51□□□□□ -1.37
PRPF38A-203ENST00000487160 TRIM25Q14258 630 aaKnown RBP6.51□□□□□ -1.37
PRPF38A-203ENST00000487160 TMEM132EQ6IEE7 984 aa6.51□□□□□ -1.37
PRPF38A-203ENST00000487160 B3GNT8Q7Z7M8 397 aa6.51□□□□□ -1.37
PRPF38A-203ENST00000487160 NBPF11Q86T75 865 aa6.51□□□□□ -1.37
PRPF38A-203ENST00000487160 LYSMD2Q8IV50 215 aa6.51□□□□□ -1.37
PRPF38A-203ENST00000487160 RPGRQ92834 1020 aaKnown RBP6.51□□□□□ -1.37
PRPF38A-203ENST00000487160 BTBD2Q9BX70 525 aa6.51□□□□□ -1.37
PRPF38A-203ENST00000487160 SGPP1Q9BX95 441 aa6.51□□□□□ -1.37
PRPF38A-203ENST00000487160 MCOLN1Q9GZU1 580 aa6.51□□□□□ -1.37
PRPF38A-203ENST00000487160 EPB41L4BQ9H329 900 aa6.51□□□□□ -1.37
PRPF38A-203ENST00000487160 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.51□□□□□ -1.37
PRPF38A-203ENST00000487160 DPP7Q9UHL4 492 aa6.51□□□□□ -1.37
PRPF38A-203ENST00000487160 ZBTB21Q9ULJ3 1066 aa6.51□□□□□ -1.37
PRPF38A-203ENST00000487160 KIF3BO15066 747 aa6.5□□□□□ -1.37
PRPF38A-203ENST00000487160 PRC1O43663 620 aa6.5□□□□□ -1.37
PRPF38A-203ENST00000487160 IL18BPO95998 194 aa6.5□□□□□ -1.37
PRPF38A-203ENST00000487160 MTHFD2P13995 350 aa6.5□□□□□ -1.37
PRPF38A-203ENST00000487160 JUNBP17275 347 aaPredicted RBP6.5□□□□□ -1.37
PRPF38A-203ENST00000487160 C5AR1P21730 350 aa6.5□□□□□ -1.37
PRPF38A-203ENST00000487160 APEX1P27695 318 aaKnown RBP6.5□□□□□ -1.37
PRPF38A-203ENST00000487160 BCAR1P56945 870 aa6.5□□□□□ -1.37
PRPF38A-203ENST00000487160 CXorf57Q6NSI4 855 aaKnown RBP6.5□□□□□ -1.37
PRPF38A-203ENST00000487160 PPM1NQ8N819 430 aa6.5□□□□□ -1.37
PRPF38A-203ENST00000487160 WDR48Q8TAF3 677 aa6.5□□□□□ -1.37
PRPF38A-203ENST00000487160 MZB1Q8WU39 189 aa6.5□□□□□ -1.37
PRPF38A-203ENST00000487160 AUTS2Q8WXX7 1259 aa6.5□□□□□ -1.37
PRPF38A-203ENST00000487160 TMEM209Q96SK2 561 aa6.5□□□□□ -1.37
PRPF38A-203ENST00000487160 GORASP1Q9BQQ3 440 aa6.5□□□□□ -1.37
PRPF38A-203ENST00000487160 TACO1Q9BSH4 297 aaKnown RBP6.5□□□□□ -1.37
PRPF38A-203ENST00000487160 OR10A5Q9H207 317 aa6.5□□□□□ -1.37
PRPF38A-203ENST00000487160 MTG2Q9H4K7 406 aa6.5□□□□□ -1.37
PRPF38A-203ENST00000487160 PRSS50Q9UI38 385 aa6.5□□□□□ -1.37
PRPF38A-203ENST00000487160 ZFP69BQ9UJL9 534 aa6.5□□□□□ -1.37
PRPF38A-203ENST00000487160 DENND2AQ9ULE3 1009 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms