RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 OATP04181 439 aa9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 PTMAP06454 111 aaKnown RBP9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 MYBP10242 640 aa9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 TXNP10599 105 aaKnown RBP9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 HOXD13P35453 343 aa9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 COPB1P53618 953 aaKnown RBP9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 NPEPPSP55786 919 aa9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 SP4Q02446 784 aa9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 MAP2K5Q13163 448 aa9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 KCNJ12Q14500 433 aa9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 KRT31Q15323 416 aa9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 PKN2Q16513 984 aaKnown RBP9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 EDRF1Q3B7T1 1238 aa9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 HSP90AA4PQ58FG1 418 aa9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 UTP14CQ5TAP6 766 aaKnown RBP9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 FAM160B1Q5W0V3 765 aa9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 PPP4R3CPQ6ZMV5 832 aa9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 LRRC55Q6ZSA7 311 aa9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 DPP9Q86TI2 863 aa9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 VSTM4Q8IW00 320 aa9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 FAM114A1Q8IWE2 563 aa9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 DRC7Q8IY82 874 aa9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 MYCT1Q8N699 235 aa9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 SPC24Q8NBT2 197 aa9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 NPLOC4Q8TAT6 608 aa9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 EMID1Q96A84 441 aaPredicted RBP9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 SNX27Q96L92 541 aa9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 CCDC43Q96MW1 224 aaKnown RBP9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 GPR20Q99678 358 aa9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 NIFKQ9BYG3 293 aaKnown RBP9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 ST6GALNAC4Q9H4F1 302 aa9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 MRPL44Q9H9J2 332 aaKnown RBP9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 MLXIPQ9HAP2 919 aa9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 RTN4Q9NQC3 1192 aaKnown RBP9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 PDLIM7Q9NR12 457 aa9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 PDGFCQ9NRA1 345 aa9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 SLC5A4Q9NY91 659 aa9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 TRAF3IP3Q9Y228 551 aa9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 PPME1Q9Y570 386 aa9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 EMSYQ7Z589 1322 aa9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 SFI1A8K8P3 1242 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 PDXKO00764 312 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 DGAT1O75907 488 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 GCNT3O95395 438 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 IGHA2P01877 340 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 PLS3P13797 630 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 EN2P19622 333 aaPredicted RBP9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 TCF7P36402 384 aaPredicted RBP9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 PBX1P40424 430 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 RTP1P59025 263 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 ARHGAP1Q07960 439 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 CRHR2Q13324 411 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 ALCAMQ13740 583 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 LAMC2Q13753 1193 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 TARBP2Q15633 366 aaKnown RBP9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 NFIL3Q16649 462 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 KNOP1Q1ED39 458 aaKnown RBP9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 CCDC144BQ3MJ40 725 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 FILIP1LQ4L180 1135 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 STXBP4Q6ZWJ1 553 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 PLPPR4Q7Z2D5 763 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 ZNF720Q7Z2F6 126 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 FAM178BQ8IXR5 827 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 DHX37Q8IY37 1157 aaKnown RBP9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 REM2Q8IYK8 340 aaPredicted RBP9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 MCPH1Q8NEM0 835 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 ANKRD20A12PQ8NF67 263 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 SOCS4Q8WXH5 440 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 COPS5Q92905 334 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 LRCH3Q96II8 777 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 FAM167AQ96KS9 214 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 CEP170P1Q96L14 293 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 CNOT6LQ96LI5 555 aaKnown RBP9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 DRC1Q96MC2 740 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 CEP63Q96MT8 703 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 CEP89Q96ST8 783 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 TINF2Q9BSI4 451 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 ABHD16BQ9H3Z7 469 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 C17orf75Q9HAS0 396 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 POLD4Q9HCU8 107 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 CYP26B1Q9NR63 512 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 LARSQ9P2J5 1176 aaKnown RBP9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 MAGEC2Q9UBF1 373 aaPredicted RBP9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 SEPT9Q9UHD8 586 aaPredicted RBP9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 NRBP1Q9UHY1 535 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 MCM3APO60318 1980 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 KIAA0100Q14667 2235 aaKnown RBP9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 ZSWIM8A7E2V4 1837 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 ZMYM2Q9UBW7 1377 aa9.49□□□□□ -0.89
NUDCD3-209ENST00000487118 HTTP42858 3142 aa9.48□□□□□ -0.89
NUDCD3-209ENST00000487118 PRPF6O94906 941 aaKnown RBP9.48□□□□□ -0.89
NUDCD3-209ENST00000487118 ALDH1A1P00352 501 aa9.48□□□□□ -0.89
NUDCD3-209ENST00000487118 GH1P01241 217 aa9.48□□□□□ -0.89
NUDCD3-209ENST00000487118 PTGS1P23219 599 aa9.48□□□□□ -0.89
NUDCD3-209ENST00000487118 NMT1P30419 496 aaKnown RBP9.48□□□□□ -0.89
NUDCD3-209ENST00000487118 RFC5P40937 340 aa9.48□□□□□ -0.89
NUDCD3-209ENST00000487118 STAT5BP51692 787 aa9.48□□□□□ -0.89
NUDCD3-209ENST00000487118 NCKAP1LP55160 1127 aa9.48□□□□□ -0.89
NUDCD3-209ENST00000487118 MARSP56192 900 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms