RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 KIFC3Q9BVG8 833 aa14.35□□□□□ -0.11
HMGN1-216ENST00000486741 CAP2P40123 477 aa14.35□□□□□ -0.11
HMGN1-216ENST00000486741 NPY5RQ15761 445 aa14.35□□□□□ -0.11
HMGN1-216ENST00000486741 CPLX4Q7Z7G2 160 aa14.35□□□□□ -0.11
HMGN1-216ENST00000486741 MAGOHBQ96A72 148 aaKnown RBP14.35□□□□□ -0.11
HMGN1-216ENST00000486741 NRBP2Q9NSY0 501 aa14.35□□□□□ -0.11
HMGN1-216ENST00000486741 PCDHB4Q9Y5E5 795 aa14.35□□□□□ -0.11
HMGN1-216ENST00000486741 RGL2O15211 777 aa14.35□□□□□ -0.11
HMGN1-216ENST00000486741 UCHL3P15374 230 aa14.35□□□□□ -0.11
HMGN1-216ENST00000486741 CENPPQ6IPU0 288 aa14.35□□□□□ -0.11
HMGN1-216ENST00000486741 TRIM65Q6PJ69 517 aa14.35□□□□□ -0.11
HMGN1-216ENST00000486741 CAPN12Q6ZSI9 719 aa14.35□□□□□ -0.11
HMGN1-216ENST00000486741 LRRC45Q96CN5 670 aa14.35□□□□□ -0.11
HMGN1-216ENST00000486741 NLRP4Q96MN2 994 aa14.35□□□□□ -0.11
HMGN1-216ENST00000486741 GLIS2Q9BZE0 524 aaPredicted RBP14.35□□□□□ -0.11
HMGN1-216ENST00000486741 NXF1Q9UBU9 619 aaKnown RBP14.35□□□□□ -0.11
HMGN1-216ENST00000486741 ARFGEF2Q9Y6D5 1785 aa14.34□□□□□ -0.11
HMGN1-216ENST00000486741 RNF40O75150 1001 aa14.34□□□□□ -0.11
HMGN1-216ENST00000486741 PSAPP07602 524 aa14.34□□□□□ -0.11
HMGN1-216ENST00000486741 ZSCAN26Q16670 478 aa14.34□□□□□ -0.11
HMGN1-216ENST00000486741 NSUN6Q8TEA1 469 aaKnown RBP14.34□□□□□ -0.11
HMGN1-216ENST00000486741 GPRC5CQ9NQ84 441 aa14.34□□□□□ -0.11
HMGN1-216ENST00000486741 TBC1D22BQ9NU19 505 aa14.34□□□□□ -0.11
HMGN1-216ENST00000486741 PDXKO00764 312 aa14.34□□□□□ -0.11
HMGN1-216ENST00000486741 ATF7P17544 494 aaPredicted RBP14.34□□□□□ -0.11
HMGN1-216ENST00000486741 YWHABP31946 246 aaKnown RBP14.34□□□□□ -0.11
HMGN1-216ENST00000486741 PTK2Q05397 1052 aa14.34□□□□□ -0.11
HMGN1-216ENST00000486741 RINT1Q6NUQ1 792 aa14.34□□□□□ -0.11
HMGN1-216ENST00000486741 MIS18BP1Q6P0N0 1132 aa14.34□□□□□ -0.11
HMGN1-216ENST00000486741 SHISA4Q96DD7 197 aa14.34□□□□□ -0.11
HMGN1-216ENST00000486741 COL1A1P02452 1464 aaPredicted RBP14.34□□□□□ -0.11
HMGN1-216ENST00000486741 IVLP07476 585 aa14.34□□□□□ -0.11
HMGN1-216ENST00000486741 NSFP46459 744 aaKnown RBP14.34□□□□□ -0.11
HMGN1-216ENST00000486741 SCFD1Q8WVM8 642 aa14.34□□□□□ -0.11
HMGN1-216ENST00000486741 EHD4Q9H223 541 aa14.34□□□□□ -0.11
HMGN1-216ENST00000486741 L2HGDHQ9H9P8 463 aa14.34□□□□□ -0.11
HMGN1-216ENST00000486741 PPANQ9NQ55 473 aaKnown RBP14.34□□□□□ -0.11
HMGN1-216ENST00000486741 RNF225M0QZC1 329 aaPredicted RBP14.33□□□□□ -0.11
HMGN1-216ENST00000486741 PGRMC1O00264 195 aaKnown RBP14.33□□□□□ -0.11
HMGN1-216ENST00000486741 FGGP02679 453 aa14.33□□□□□ -0.11
HMGN1-216ENST00000486741 TMEM191BP0C7N4 346 aa14.33□□□□□ -0.11
HMGN1-216ENST00000486741 CALRP27797 417 aaKnown RBP14.33□□□□□ -0.11
HMGN1-216ENST00000486741 TBX2Q13207 712 aaPredicted RBP14.33□□□□□ -0.11
HMGN1-216ENST00000486741 SCARA5Q6ZMJ2 495 aa14.33□□□□□ -0.11
HMGN1-216ENST00000486741 PASD1Q8IV76 773 aa14.33□□□□□ -0.11
HMGN1-216ENST00000486741 ZBTB8OSQ8IWT0 167 aa14.33□□□□□ -0.11
HMGN1-216ENST00000486741 THNSL1Q8IYQ7 743 aa14.33□□□□□ -0.11
HMGN1-216ENST00000486741 VAMP7P51809 220 aa14.33□□□□□ -0.12
HMGN1-216ENST00000486741 PPFIA1Q13136 1202 aa14.33□□□□□ -0.12
HMGN1-216ENST00000486741 C15orf52Q6ZUT6 534 aaKnown RBP14.33□□□□□ -0.12
HMGN1-216ENST00000486741 HAS1Q92839 578 aa14.33□□□□□ -0.12
HMGN1-216ENST00000486741 TRIM6Q9C030 488 aaPredicted RBP14.33□□□□□ -0.12
HMGN1-216ENST00000486741 DDX47Q9H0S4 455 aaKnown RBP14.33□□□□□ -0.12
HMGN1-216ENST00000486741 GGA3Q9NZ52 723 aa14.33□□□□□ -0.12
HMGN1-216ENST00000486741 TMEM150BA6NC51 233 aa14.33□□□□□ -0.12
HMGN1-216ENST00000486741 ABL1P00519 1130 aa14.33□□□□□ -0.12
HMGN1-216ENST00000486741 PLTPP55058 493 aa14.33□□□□□ -0.12
HMGN1-216ENST00000486741 NBPF12Q5TAG4 269 aaPredicted RBP14.33□□□□□ -0.12
HMGN1-216ENST00000486741 INTS8Q75QN2 995 aaKnown RBP14.33□□□□□ -0.12
HMGN1-216ENST00000486741 C4orf32Q8N8J7 132 aa14.33□□□□□ -0.12
HMGN1-216ENST00000486741 SYT2Q8N9I0 419 aaPredicted RBP14.33□□□□□ -0.12
HMGN1-216ENST00000486741 ERGIC2Q96RQ1 377 aa14.33□□□□□ -0.12
HMGN1-216ENST00000486741 LRRC1Q9BTT6 524 aa14.33□□□□□ -0.12
HMGN1-216ENST00000486741 INTS2Q9H0H0 1204 aaKnown RBP14.33□□□□□ -0.12
HMGN1-216ENST00000486741 UNC45AQ9H3U1 944 aa14.33□□□□□ -0.12
HMGN1-216ENST00000486741 HACL1Q9UJ83 578 aa14.33□□□□□ -0.12
HMGN1-216ENST00000486741 MYO1FO00160 1098 aa14.32□□□□□ -0.12
HMGN1-216ENST00000486741 TBX3O15119 743 aa14.32□□□□□ -0.12
HMGN1-216ENST00000486741 KLRC4O43908 158 aa14.32□□□□□ -0.12
HMGN1-216ENST00000486741 GNGT1P63211 74 aa14.32□□□□□ -0.12
HMGN1-216ENST00000486741 MKRN4PQ13434 485 aaPredicted RBP14.32□□□□□ -0.12
HMGN1-216ENST00000486741 DGKZQ13574 1117 aa14.32□□□□□ -0.12
HMGN1-216ENST00000486741 GIT2Q14161 759 aa14.32□□□□□ -0.12
HMGN1-216ENST00000486741 EML1O00423 815 aa14.32□□□□□ -0.12
HMGN1-216ENST00000486741 PPP1R11O60927 126 aaPredicted RBP14.32□□□□□ -0.12
HMGN1-216ENST00000486741 NEBLO76041 1014 aa14.32□□□□□ -0.12
HMGN1-216ENST00000486741 NR3C2P08235 984 aa14.32□□□□□ -0.12
HMGN1-216ENST00000486741 KLRC1P26715 233 aa14.32□□□□□ -0.12
HMGN1-216ENST00000486741 PSMC5P62195 406 aa14.32□□□□□ -0.12
HMGN1-216ENST00000486741 COG1Q8WTW3 980 aa14.32□□□□□ -0.12
HMGN1-216ENST00000486741 MTMR9Q96QG7 549 aa14.32□□□□□ -0.12
HMGN1-216ENST00000486741 TMX2Q9Y320 296 aa14.32□□□□□ -0.12
HMGN1-216ENST00000486741 SREBF1P36956 1147 aa14.32□□□□□ -0.12
HMGN1-216ENST00000486741 DMTNQ08495 405 aa14.32□□□□□ -0.12
HMGN1-216ENST00000486741 KCNA1Q09470 495 aa14.32□□□□□ -0.12
HMGN1-216ENST00000486741 TRIP13Q15645 432 aaPredicted RBP14.32□□□□□ -0.12
HMGN1-216ENST00000486741 ARFGAP2Q8N6H7 521 aa14.32□□□□□ -0.12
HMGN1-216ENST00000486741 SPATA4Q8NEY3 305 aa14.32□□□□□ -0.12
HMGN1-216ENST00000486741 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.32□□□□□ -0.12
HMGN1-216ENST00000486741 ZNF526Q8TF50 670 aaPredicted RBP14.32□□□□□ -0.12
HMGN1-216ENST00000486741 MXRA8Q9BRK3 442 aa14.32□□□□□ -0.12
HMGN1-216ENST00000486741 MMTAG2Q9BU76 263 aaKnown RBP14.32□□□□□ -0.12
HMGN1-216ENST00000486741 APOL6Q9BWW8 343 aa14.32□□□□□ -0.12
HMGN1-216ENST00000486741 ATP8A1Q9Y2Q0 1164 aa14.32□□□□□ -0.12
HMGN1-216ENST00000486741 CAPN6Q9Y6Q1 641 aa14.32□□□□□ -0.12
HMGN1-216ENST00000486741 A0A087X0T9 212 aa14.32□□□□□ -0.12
HMGN1-216ENST00000486741 FAM228BP0C875 321 aa14.32□□□□□ -0.12
HMGN1-216ENST00000486741 UAP1Q16222 522 aaPredicted RBP14.32□□□□□ -0.12
HMGN1-216ENST00000486741 FRMD5Q7Z6J6 570 aa14.32□□□□□ -0.12
HMGN1-216ENST00000486741 MICALL1Q8N3F8 863 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms