RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 PPP1R15BQ5SWA1 713 aa11.53□□□□□ -0.56
CCDC171-208ENST00000486641 GALNT17Q6IS24 598 aa11.53□□□□□ -0.56
CCDC171-208ENST00000486641 DPY19L2P1Q6NXN4 242 aa11.53□□□□□ -0.56
CCDC171-208ENST00000486641 GALNT15Q8N3T1 639 aa11.53□□□□□ -0.56
CCDC171-208ENST00000486641 FGFBP2Q9BYJ0 223 aa11.53□□□□□ -0.56
CCDC171-208ENST00000486641 ETNK1Q9HBU6 452 aa11.53□□□□□ -0.56
CCDC171-208ENST00000486641 BARHL2Q9NY43 387 aa11.53□□□□□ -0.56
CCDC171-208ENST00000486641 AMFRQ9UKV5 643 aa11.53□□□□□ -0.56
CCDC171-208ENST00000486641 ASB3Q9Y575 518 aa11.53□□□□□ -0.56
CCDC171-208ENST00000486641 TSPY2A6NKD2 308 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 O00370 1275 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 NPTXRO95502 500 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 CYP2D6P10635 497 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 FGFR4P22455 802 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 CALB2P22676 271 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 RAD23BP54727 409 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 RNASELQ05823 741 aaKnown RBP11.52□□□□□ -0.57
CCDC171-208ENST00000486641 ADAM9Q13443 819 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 PDCD2Q16342 344 aaPredicted RBP11.52□□□□□ -0.57
CCDC171-208ENST00000486641 TBC1D25Q3MII6 688 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 SOGA3Q5TF21 947 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 FOXR2Q6PJQ5 311 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 MTHFD1LQ6UB35 978 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 BARGINQ6ZT62 677 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 TAOK1Q7L7X3 1001 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 KCNK18Q7Z418 384 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 JAMLQ86YT9 394 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 DNAJC10Q8IXB1 793 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 SYCE1Q8N0S2 351 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 ANKLE1Q8NAG6 615 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 DRAXINQ8NBI3 349 aaPredicted RBP11.52□□□□□ -0.57
CCDC171-208ENST00000486641 RBM46Q8TBY0 533 aaKnown RBP11.52□□□□□ -0.57
CCDC171-208ENST00000486641 CABLES1Q8TDN4 633 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 RAD54LQ92698 747 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 NUDT12Q9BQG2 462 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 TMEM109Q9BVC6 243 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 ZCWPW1Q9H0M4 648 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 RNPEPL1Q9HAU8 725 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 MLXIPLQ9NP71 852 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 GRHL1Q9NZI5 618 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 TBC1D7Q9P0N9 293 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 STK17AQ9UEE5 414 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 MAD2L2Q9UI95 211 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 PPP1R9AQ9ULJ8 1098 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 SH3BP1Q9Y3L3 701 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 C2CD2Q9Y426 696 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 DDX3YO15523 660 aaKnown RBP11.52□□□□□ -0.57
CCDC171-208ENST00000486641 H2AFZP0C0S5 128 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 ATP6V1C1P21283 382 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 MRPS35P82673 323 aaKnown RBP11.52□□□□□ -0.57
CCDC171-208ENST00000486641 KCNH2Q12809 1159 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 LBRQ14739 615 aaKnown RBP11.52□□□□□ -0.57
CCDC171-208ENST00000486641 NONOQ15233 471 aaKnown RBP eCLIP11.52□□□□□ -0.57
CCDC171-208ENST00000486641 ARMC3Q5W041 872 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 BTNL9Q6UXG8 535 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 H2AFVQ71UI9 128 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 OTUD6AQ7L8S5 288 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 NELFCDQ8IXH7 590 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 LMNTD2Q8IXW0 634 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 ZCRB1Q8TBF4 217 aaKnown RBP11.52□□□□□ -0.57
CCDC171-208ENST00000486641 CDK5RAP3Q96JB5 506 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 TRIM7Q9C029 511 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 OSGEPQ9NPF4 335 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 NENFQ9UMX5 172 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 MTMR7Q9Y216 660 aa11.52□□□□□ -0.57
CCDC171-208ENST00000486641 BZW2Q9Y6E2 419 aaKnown RBP11.52□□□□□ -0.57
CCDC171-208ENST00000486641 ATAD5Q96QE3 1844 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 A0A0A6YYK5 440 aaPredicted RBP11.51□□□□□ -0.57
CCDC171-208ENST00000486641 TMEM120BA0PK00 339 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 FAM187AA6NFU0 413 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 RIPK2O43353 540 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 PEX11AO75192 247 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 UNC5CO95185 931 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 TPBGLP0DKB5 382 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 UCHL3P15374 230 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 CNGA1P29973 690 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 EPS15P42566 896 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 PEX5P50542 639 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 DRG2P55039 364 aaKnown RBP11.51□□□□□ -0.57
CCDC171-208ENST00000486641 MARSP56192 900 aaKnown RBP11.51□□□□□ -0.57
CCDC171-208ENST00000486641 COASYQ13057 564 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 ZNF211Q13398 564 aaPredicted RBP11.51□□□□□ -0.57
CCDC171-208ENST00000486641 CGB2Q6NT52 195 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 TMEM154Q6P9G4 183 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 NEK8Q86SG6 692 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 CROCCP2Q86T23 111 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 PNMA1Q8ND90 353 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 FBF1Q8TES7 1133 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 ZNF384Q8TF68 577 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 ZFAND2BQ8WV99 257 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 CEP63Q96MT8 703 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 RAB3IPQ96QF0 476 aaPredicted RBP11.51□□□□□ -0.57
CCDC171-208ENST00000486641 CRAMP1Q96RY5 1269 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 STMN4Q9H169 189 aaPredicted RBP11.51□□□□□ -0.57
CCDC171-208ENST00000486641 WDR35Q9P2L0 1181 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 COL18A1P39060 1754 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 CICQ96RK0 1608 aaPredicted RBP11.51□□□□□ -0.57
CCDC171-208ENST00000486641 C1orf167Q5SNV9 1468 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 A0A1B0GVG6 124 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 FOXO6A8MYZ6 492 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms