RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 A0A0G2JMZ2 1700 aa22.34■■□□□ 1.17
HPS3-206ENST00000486530 LCTP09848 1927 aa22.33■■□□□ 1.17
HPS3-206ENST00000486530 SPDYE16A6NNV3 312 aaPredicted RBP22.33■■□□□ 1.17
HPS3-206ENST00000486530 ZNF263O14978 683 aa22.33■■□□□ 1.17
HPS3-206ENST00000486530 AKR1B10O60218 316 aa22.33■■□□□ 1.17
HPS3-206ENST00000486530 ATP9AO75110 1047 aa22.33■■□□□ 1.17
HPS3-206ENST00000486530 PPP1R37O75864 691 aa22.33■■□□□ 1.17
HPS3-206ENST00000486530 YWHABP31946 246 aaKnown RBP22.33■■□□□ 1.17
HPS3-206ENST00000486530 IREB2P48200 963 aaKnown RBP22.33■■□□□ 1.17
HPS3-206ENST00000486530 CASP4P49662 377 aa22.33■■□□□ 1.17
HPS3-206ENST00000486530 CYP27A1Q02318 531 aa22.33■■□□□ 1.17
HPS3-206ENST00000486530 KIF5AQ12840 1032 aa22.33■■□□□ 1.17
HPS3-206ENST00000486530 SLC9C1Q4G0N8 1177 aa22.33■■□□□ 1.17
HPS3-206ENST00000486530 DCAF17Q5H9S7 520 aaPredicted RBP22.33■■□□□ 1.17
HPS3-206ENST00000486530 ZNF746Q6NUN9 644 aaPredicted RBP22.33■■□□□ 1.17
HPS3-206ENST00000486530 CEP112Q8N8E3 955 aa22.33■■□□□ 1.17
HPS3-206ENST00000486530 CNKSR2Q8WXI2 1034 aa22.33■■□□□ 1.17
HPS3-206ENST00000486530 INPP4AQ96PE3 977 aaPredicted RBP22.33■■□□□ 1.17
HPS3-206ENST00000486530 GBP3Q9H0R5 595 aa22.33■■□□□ 1.17
HPS3-206ENST00000486530 TAF1DQ9H5J8 278 aaPredicted RBP22.33■■□□□ 1.17
HPS3-206ENST00000486530 CSADQ9Y600 493 aa22.33■■□□□ 1.17
HPS3-206ENST00000486530 USO1O60763 962 aaKnown RBP22.32■■□□□ 1.16
HPS3-206ENST00000486530 SERPING1P05155 500 aa22.32■■□□□ 1.16
HPS3-206ENST00000486530 HGSNATQ68CP4 663 aa22.32■■□□□ 1.16
HPS3-206ENST00000486530 FAM186BQ8IYM0 893 aa22.32■■□□□ 1.16
HPS3-206ENST00000486530 TXLNBQ8N3L3 684 aa22.32■■□□□ 1.16
HPS3-206ENST00000486530 SLC35C1Q96A29 364 aa22.32■■□□□ 1.16
HPS3-206ENST00000486530 SENP7Q9BQF6 1050 aa22.32■■□□□ 1.16
HPS3-206ENST00000486530 IFIH1Q9BYX4 1025 aaKnown RBP22.32■■□□□ 1.16
HPS3-206ENST00000486530 LACRTQ9GZZ8 138 aa22.32■■□□□ 1.16
HPS3-206ENST00000486530 CYP39A1Q9NYL5 469 aa22.32■■□□□ 1.16
HPS3-206ENST00000486530 RCCD1A6NED2 376 aa22.32■■□□□ 1.16
HPS3-206ENST00000486530 CCNE2O96020 404 aa22.32■■□□□ 1.16
HPS3-206ENST00000486530 EXOC3L4Q17RC7 722 aa22.32■■□□□ 1.16
HPS3-206ENST00000486530 FBXO38Q6PIJ6 1188 aa22.32■■□□□ 1.16
HPS3-206ENST00000486530 BORCS6Q96GS4 357 aa22.32■■□□□ 1.16
HPS3-206ENST00000486530 AGPAT3Q9NRZ7 376 aa22.32■■□□□ 1.16
HPS3-206ENST00000486530 PCDHA13Q9Y5I0 950 aa22.32■■□□□ 1.16
HPS3-206ENST00000486530 ARID2Q68CP9 1835 aa22.31■■□□□ 1.16
HPS3-206ENST00000486530 GTPBP10A4D1E9 387 aaKnown RBP22.31■■□□□ 1.16
HPS3-206ENST00000486530 K7ENM7 598 aa22.31■■□□□ 1.16
HPS3-206ENST00000486530 STAM2O75886 525 aa22.31■■□□□ 1.16
HPS3-206ENST00000486530 UGCGQ16739 394 aa22.31■■□□□ 1.16
HPS3-206ENST00000486530 WHAMMP3Q1A5X7 153 aa22.31■■□□□ 1.16
HPS3-206ENST00000486530 ASTE1Q2TB18 679 aaPredicted RBP22.31■■□□□ 1.16
HPS3-206ENST00000486530 TDRD12Q587J7 1177 aaKnown RBP22.31■■□□□ 1.16
HPS3-206ENST00000486530 TCERG1LQ5VWI1 586 aa22.31■■□□□ 1.16
HPS3-206ENST00000486530 RSRC2Q7L4I2 434 aaKnown RBP22.31■■□□□ 1.16
HPS3-206ENST00000486530 SRGAP1Q7Z6B7 1085 aa22.31■■□□□ 1.16
HPS3-206ENST00000486530 GOLGA1Q92805 767 aa22.31■■□□□ 1.16
HPS3-206ENST00000486530 CCDC94Q9BW85 323 aaPredicted RBP22.31■■□□□ 1.16
HPS3-206ENST00000486530 A1CFQ9NQ94 594 aaKnown RBP22.31■■□□□ 1.16
HPS3-206ENST00000486530 ANKEF1Q9NU02 776 aa22.31■■□□□ 1.16
HPS3-206ENST00000486530 DMAC2Q9NW81 257 aa22.31■■□□□ 1.16
HPS3-206ENST00000486530 TFR2Q9UP52 801 aa22.31■■□□□ 1.16
HPS3-206ENST00000486530 PLS3P13797 630 aa22.3■■□□□ 1.16
HPS3-206ENST00000486530 H2AFXP16104 143 aaPredicted RBP22.3■■□□□ 1.16
HPS3-206ENST00000486530 MYBPC2Q14324 1141 aa22.3■■□□□ 1.16
HPS3-206ENST00000486530 SLC9A9Q8IVB4 645 aa22.3■■□□□ 1.16
HPS3-206ENST00000486530 CDHR1Q96JP9 859 aa22.3■■□□□ 1.16
HPS3-206ENST00000486530 DRC1Q96MC2 740 aa22.3■■□□□ 1.16
HPS3-206ENST00000486530 AIPL1Q9NZN9 384 aa22.3■■□□□ 1.16
HPS3-206ENST00000486530 FRMD4BQ9Y2L6 1034 aa22.3■■□□□ 1.16
HPS3-206ENST00000486530 AMPD2Q01433 879 aa22.3■■□□□ 1.16
HPS3-206ENST00000486530 GBP6Q6ZN66 633 aa22.3■■□□□ 1.16
HPS3-206ENST00000486530 MOB2Q70IA6 237 aa22.3■■□□□ 1.16
HPS3-206ENST00000486530 KSR1Q8IVT5 923 aa22.3■■□□□ 1.16
HPS3-206ENST00000486530 SECISBP2LQ93073 1101 aaKnown RBP22.3■■□□□ 1.16
HPS3-206ENST00000486530 MOV10L1Q9BXT6 1211 aaKnown RBP22.3■■□□□ 1.16
HPS3-206ENST00000486530 TMEM206Q9H813 350 aa22.3■■□□□ 1.16
HPS3-206ENST00000486530 FBXL5Q9UKA1 691 aa22.3■■□□□ 1.16
HPS3-206ENST00000486530 MYO6Q9UM54 1294 aa22.3■■□□□ 1.16
HPS3-206ENST00000486530 DOCK5Q9H7D0 1870 aa22.3■■□□□ 1.16
HPS3-206ENST00000486530 RBAK-RBAKDNI3L0D1 243 aa22.29■■□□□ 1.16
HPS3-206ENST00000486530 TLR2O60603 784 aa22.29■■□□□ 1.16
HPS3-206ENST00000486530 PON1P27169 355 aa22.29■■□□□ 1.16
HPS3-206ENST00000486530 CHMP4BP1P59074 171 aa22.29■■□□□ 1.16
HPS3-206ENST00000486530 RAPGEF1Q13905 1077 aa22.29■■□□□ 1.16
HPS3-206ENST00000486530 PLS1Q14651 629 aa22.29■■□□□ 1.16
HPS3-206ENST00000486530 DPY19L2P1Q6NXN4 242 aa22.29■■□□□ 1.16
HPS3-206ENST00000486530 SMAP1Q8IYB5 467 aaPredicted RBP22.29■■□□□ 1.16
HPS3-206ENST00000486530 SYCP3Q8IZU3 236 aa22.29■■□□□ 1.16
HPS3-206ENST00000486530 CLMNQ96JQ2 1002 aa22.29■■□□□ 1.16
HPS3-206ENST00000486530 IKZF4Q9H2S9 585 aa22.29■■□□□ 1.16
HPS3-206ENST00000486530 ELP3Q9H9T3 547 aa22.29■■□□□ 1.16
HPS3-206ENST00000486530 PCDHA10Q9Y5I2 948 aa22.29■■□□□ 1.16
HPS3-206ENST00000486530 NFASCO94856 1347 aa22.29■■□□□ 1.16
HPS3-206ENST00000486530 IQCA1LA6NCM1 817 aa22.28■■□□□ 1.16
HPS3-206ENST00000486530 KCNA2P16389 499 aa22.28■■□□□ 1.16
HPS3-206ENST00000486530 SLC9A1P19634 815 aa22.28■■□□□ 1.16
HPS3-206ENST00000486530 NF2P35240 595 aa22.28■■□□□ 1.16
HPS3-206ENST00000486530 TUBB4BP68371 445 aa22.28■■□□□ 1.16
HPS3-206ENST00000486530 PPATQ06203 517 aa22.28■■□□□ 1.16
HPS3-206ENST00000486530 EAPPQ56P03 285 aaPredicted RBP22.28■■□□□ 1.16
HPS3-206ENST00000486530 TREML2Q5T2D2 321 aa22.28■■□□□ 1.16
HPS3-206ENST00000486530 KLHDC7AQ5VTJ3 777 aa22.28■■□□□ 1.16
HPS3-206ENST00000486530 MAEAQ7L5Y9 396 aa22.28■■□□□ 1.16
HPS3-206ENST00000486530 ANKRD13AQ8IZ07 590 aa22.28■■□□□ 1.16
HPS3-206ENST00000486530 GPR161Q8N6U8 529 aaKnown RBP22.28■■□□□ 1.16
HPS3-206ENST00000486530 SLC17A8Q8NDX2 589 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms