RNA–Protein interactions for RNA: ENST00000486420.1

C9orf16-202, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 5

Gene C9orf16, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-202ENST00000486420 SEPT8Q92599 483 aa13.81□□□□□ -0.2
C9orf16-202ENST00000486420 CELF4Q9BZC1 486 aaKnown RBP13.81□□□□□ -0.2
C9orf16-202ENST00000486420 FTOQ9C0B1 505 aaKnown RBP eCLIP13.81□□□□□ -0.2
C9orf16-202ENST00000486420 LRRC27Q9C0I9 530 aa13.81□□□□□ -0.2
C9orf16-202ENST00000486420 DHX33Q9H6R0 707 aaKnown RBP13.81□□□□□ -0.2
C9orf16-202ENST00000486420 ATP6V0A4Q9HBG4 840 aa13.81□□□□□ -0.2
C9orf16-202ENST00000486420 RGL1Q9NZL6 768 aa13.81□□□□□ -0.2
C9orf16-202ENST00000486420 TELO2Q9Y4R8 837 aa13.81□□□□□ -0.2
C9orf16-202ENST00000486420 TRPV2Q9Y5S1 764 aa13.81□□□□□ -0.2
C9orf16-202ENST00000486420 IGKV6-21A0A0C4DH24 114 aa13.8□□□□□ -0.2
C9orf16-202ENST00000486420 ZBTB42B2RXF5 422 aa13.8□□□□□ -0.2
C9orf16-202ENST00000486420 GPR182O15218 404 aa13.8□□□□□ -0.2
C9orf16-202ENST00000486420 CUTAO60888 179 aa13.8□□□□□ -0.2
C9orf16-202ENST00000486420 SPATA31C1P0DKV0 1188 aa13.8□□□□□ -0.2
C9orf16-202ENST00000486420 CCL23P55773 120 aa13.8□□□□□ -0.2
C9orf16-202ENST00000486420 NCBP1Q09161 790 aaKnown RBP13.8□□□□□ -0.2
C9orf16-202ENST00000486420 PPP2R5AQ15172 486 aa13.8□□□□□ -0.2
C9orf16-202ENST00000486420 PTPAQ15257 358 aa13.8□□□□□ -0.2
C9orf16-202ENST00000486420 ZNF618Q5T7W0 954 aa13.8□□□□□ -0.2
C9orf16-202ENST00000486420 TSHZ1Q6ZSZ6 1077 aa13.8□□□□□ -0.2
C9orf16-202ENST00000486420 CABP7Q86V35 215 aa13.8□□□□□ -0.2
C9orf16-202ENST00000486420 LINC00301Q8NCQ3 95 aa13.8□□□□□ -0.2
C9orf16-202ENST00000486420 DNAJB3Q8WWF6 145 aa13.8□□□□□ -0.2
C9orf16-202ENST00000486420 RSPH1Q8WYR4 309 aa13.8□□□□□ -0.2
C9orf16-202ENST00000486420 DHX38Q92620 1227 aaKnown RBP13.8□□□□□ -0.2
C9orf16-202ENST00000486420 CCDC34Q96HJ3 373 aa13.8□□□□□ -0.2
C9orf16-202ENST00000486420 LRCH3Q96II8 777 aa13.8□□□□□ -0.2
C9orf16-202ENST00000486420 CTAGE1Q96RT6 745 aa13.8□□□□□ -0.2
C9orf16-202ENST00000486420 MTRQ99707 1265 aa13.8□□□□□ -0.2
C9orf16-202ENST00000486420 CCSER1Q9C0I3 900 aa13.8□□□□□ -0.2
C9orf16-202ENST00000486420 WNT8AQ9H1J5 351 aa13.8□□□□□ -0.2
C9orf16-202ENST00000486420 C17orf75Q9HAS0 396 aa13.8□□□□□ -0.2
C9orf16-202ENST00000486420 AKT3Q9Y243 479 aa13.8□□□□□ -0.2
C9orf16-202ENST00000486420 STBD1O95210 358 aa13.79□□□□□ -0.2
C9orf16-202ENST00000486420 EYA4O95677 639 aa13.79□□□□□ -0.2
C9orf16-202ENST00000486420 CSF2RAP15509 400 aa13.79□□□□□ -0.2
C9orf16-202ENST00000486420 RARRES1P49788 294 aa13.79□□□□□ -0.2
C9orf16-202ENST00000486420 ZNF200P98182 395 aaPredicted RBP13.79□□□□□ -0.2
C9orf16-202ENST00000486420 CCDC73Q6ZRK6 1079 aa13.79□□□□□ -0.2
C9orf16-202ENST00000486420 KIAA0319LQ8IZA0 1049 aa13.79□□□□□ -0.2
C9orf16-202ENST00000486420 PHOSPHO2Q8TCD6 241 aa13.79□□□□□ -0.2
C9orf16-202ENST00000486420 KIFAP3Q92845 792 aa13.79□□□□□ -0.2
C9orf16-202ENST00000486420 SCLT1Q96NL6 688 aa13.79□□□□□ -0.2
C9orf16-202ENST00000486420 USP28Q96RU2 1077 aa13.79□□□□□ -0.2
C9orf16-202ENST00000486420 GCOM2Q9BZD3 368 aaPredicted RBP13.79□□□□□ -0.2
C9orf16-202ENST00000486420 FAM49AQ9H0Q0 323 aaPredicted RBP13.79□□□□□ -0.2
C9orf16-202ENST00000486420 CUEDC2Q9H467 287 aa13.79□□□□□ -0.2
C9orf16-202ENST00000486420 SUGCTQ9HAC7 445 aa13.79□□□□□ -0.2
C9orf16-202ENST00000486420 DDX19AQ9NUU7 478 aaKnown RBP13.79□□□□□ -0.2
C9orf16-202ENST00000486420 STK17AQ9UEE5 414 aa13.79□□□□□ -0.2
C9orf16-202ENST00000486420 KIAA1024Q9UPX6 916 aa13.79□□□□□ -0.2
C9orf16-202ENST00000486420 CLIC4Q9Y696 253 aa13.79□□□□□ -0.2
C9orf16-202ENST00000486420 LOXHD1Q8IVV2 1947 aa13.79□□□□□ -0.2
C9orf16-202ENST00000486420 LAMA2P24043 3122 aaKnown RBP13.78□□□□□ -0.2
C9orf16-202ENST00000486420 H0YCG3 227 aa13.78□□□□□ -0.2
C9orf16-202ENST00000486420 MED24O75448 989 aa13.78□□□□□ -0.2
C9orf16-202ENST00000486420 SFPQP23246 707 aaKnown RBP eCLIP13.78□□□□□ -0.2
C9orf16-202ENST00000486420 KCNJ6P48051 423 aa13.78□□□□□ -0.2
C9orf16-202ENST00000486420 EMC2Q15006 297 aa13.78□□□□□ -0.2
C9orf16-202ENST00000486420 TRMT1LQ7Z2T5 733 aaKnown RBP13.78□□□□□ -0.2
C9orf16-202ENST00000486420 LINC01465Q8N7H1 131 aa13.78□□□□□ -0.2
C9orf16-202ENST00000486420 HERVK_113Q902F9 699 aa13.78□□□□□ -0.2
C9orf16-202ENST00000486420 DRC1Q96MC2 740 aa13.78□□□□□ -0.2
C9orf16-202ENST00000486420 IFIH1Q9BYX4 1025 aaKnown RBP13.78□□□□□ -0.2
C9orf16-202ENST00000486420 MAGEF1Q9HAY2 307 aa13.78□□□□□ -0.2
C9orf16-202ENST00000486420 BMP2KQ9NSY1 1161 aaPredicted RBP13.78□□□□□ -0.2
C9orf16-202ENST00000486420 FAM13BQ9NYF5 915 aa13.78□□□□□ -0.2
C9orf16-202ENST00000486420 SUCLA2Q9P2R7 463 aaPredicted RBP13.78□□□□□ -0.2
C9orf16-202ENST00000486420 CDY2AQ9Y6F7 541 aa13.78□□□□□ -0.2
C9orf16-202ENST00000486420 TANC1Q9C0D5 1861 aa13.78□□□□□ -0.2
C9orf16-202ENST00000486420 CYP11B2P19099 503 aa13.77□□□□□ -0.21
C9orf16-202ENST00000486420 EIF4BP23588 611 aaKnown RBP13.77□□□□□ -0.21
C9orf16-202ENST00000486420 PHKA2P46019 1235 aa13.77□□□□□ -0.21
C9orf16-202ENST00000486420 ME1P48163 572 aa13.77□□□□□ -0.21
C9orf16-202ENST00000486420 MGAT3Q09327 533 aa13.77□□□□□ -0.21
C9orf16-202ENST00000486420 PAK2Q13177 524 aa13.77□□□□□ -0.21
C9orf16-202ENST00000486420 PLEKHG4Q58EX7 1191 aa13.77□□□□□ -0.21
C9orf16-202ENST00000486420 POTEGQ6S5H5 508 aa13.77□□□□□ -0.21
C9orf16-202ENST00000486420 RUFY4Q6ZNE9 571 aa13.77□□□□□ -0.21
C9orf16-202ENST00000486420 SRGAP1Q7Z6B7 1085 aa13.77□□□□□ -0.21
C9orf16-202ENST00000486420 SLC17A8Q8NDX2 589 aa13.77□□□□□ -0.21
C9orf16-202ENST00000486420 TRAPPC12Q8WVT3 735 aa13.77□□□□□ -0.21
C9orf16-202ENST00000486420 NLRP7Q8WX94 980 aa13.77□□□□□ -0.21
C9orf16-202ENST00000486420 IFT74Q96LB3 600 aa13.77□□□□□ -0.21
C9orf16-202ENST00000486420 SPATA32Q96LK8 384 aa13.77□□□□□ -0.21
C9orf16-202ENST00000486420 RNPC3Q96LT9 517 aaKnown RBP13.77□□□□□ -0.21
C9orf16-202ENST00000486420 SLC9A7Q96T83 725 aa13.77□□□□□ -0.21
C9orf16-202ENST00000486420 NFKBIZQ9BYH8 718 aa13.77□□□□□ -0.21
C9orf16-202ENST00000486420 C2orf40Q9H1Z8 148 aa13.77□□□□□ -0.21
C9orf16-202ENST00000486420 FBXO2Q9UK22 296 aaPredicted RBP13.77□□□□□ -0.21
C9orf16-202ENST00000486420 RCOR1Q9UKL0 485 aa13.77□□□□□ -0.21
C9orf16-202ENST00000486420 COL4A3BPQ9Y5P4 624 aa13.77□□□□□ -0.21
C9orf16-202ENST00000486420 RPS6KA5O75582 802 aa13.76□□□□□ -0.21
C9orf16-202ENST00000486420 CHRNA1P02708 482 aa13.76□□□□□ -0.21
C9orf16-202ENST00000486420 AMHP03971 560 aa13.76□□□□□ -0.21
C9orf16-202ENST00000486420 SKIP12755 728 aa13.76□□□□□ -0.21
C9orf16-202ENST00000486420 NCLP19338 710 aaKnown RBP13.76□□□□□ -0.21
C9orf16-202ENST00000486420 ITGB8P26012 769 aa13.76□□□□□ -0.21
C9orf16-202ENST00000486420 EFNA5P52803 228 aa13.76□□□□□ -0.21
C9orf16-202ENST00000486420 AMPD3Q01432 767 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms