RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 ARHGEF35A5YM69 484 aa17.61■□□□□ 0.41
APOE-205ENST00000485628 KBTBD13C9JR72 458 aa17.61■□□□□ 0.41
APOE-205ENST00000485628 GTPBP6O43824 516 aaPredicted RBP17.61■□□□□ 0.41
APOE-205ENST00000485628 KLRC4O43908 158 aa17.61■□□□□ 0.41
APOE-205ENST00000485628 TRAK2O60296 914 aa17.61■□□□□ 0.41
APOE-205ENST00000485628 KINO60870 393 aaKnown RBP17.61■□□□□ 0.41
APOE-205ENST00000485628 TFRCP02786 760 aaKnown RBP17.61■□□□□ 0.41
APOE-205ENST00000485628 ZNF131P52739 623 aa17.61■□□□□ 0.41
APOE-205ENST00000485628 AMPD3Q01432 767 aa17.61■□□□□ 0.41
APOE-205ENST00000485628 PPFIA1Q13136 1202 aa17.61■□□□□ 0.41
APOE-205ENST00000485628 SNX17Q15036 470 aa17.61■□□□□ 0.41
APOE-205ENST00000485628 MTERF2Q49AM1 385 aa17.61■□□□□ 0.41
APOE-205ENST00000485628 MTHFD1LQ6UB35 978 aa17.61■□□□□ 0.41
APOE-205ENST00000485628 GPBP1Q86WP2 473 aa17.61■□□□□ 0.41
APOE-205ENST00000485628 EXOC8Q8IYI6 725 aa17.61■□□□□ 0.41
APOE-205ENST00000485628 TRAPPC12Q8WVT3 735 aa17.61■□□□□ 0.41
APOE-205ENST00000485628 STAMQ92783 540 aa17.61■□□□□ 0.41
APOE-205ENST00000485628 GLT1D1Q96MS3 346 aa17.61■□□□□ 0.41
APOE-205ENST00000485628 TIPINQ9BVW5 301 aa17.61■□□□□ 0.41
APOE-205ENST00000485628 SETD4Q9NVD3 440 aa17.61■□□□□ 0.41
APOE-205ENST00000485628 TMEM63CQ9P1W3 806 aa17.61■□□□□ 0.41
APOE-205ENST00000485628 TRPC6Q9Y210 931 aa17.61■□□□□ 0.41
APOE-205ENST00000485628 MAGEB2O15479 319 aa17.6■□□□□ 0.41
APOE-205ENST00000485628 GAS2O43903 313 aaKnown RBP17.6■□□□□ 0.41
APOE-205ENST00000485628 PRR29P0C7W0 189 aa17.6■□□□□ 0.41
APOE-205ENST00000485628 KLRC1P26715 233 aa17.6■□□□□ 0.41
APOE-205ENST00000485628 CUL4BQ13620 913 aa17.6■□□□□ 0.41
APOE-205ENST00000485628 POSTNQ15063 836 aa17.6■□□□□ 0.41
APOE-205ENST00000485628 GDF6Q6KF10 455 aaPredicted RBP17.6■□□□□ 0.41
APOE-205ENST00000485628 TRMT1LQ7Z2T5 733 aaKnown RBP17.6■□□□□ 0.41
APOE-205ENST00000485628 KCNN1Q92952 543 aa17.6■□□□□ 0.41
APOE-205ENST00000485628 FIZ1Q96SL8 496 aa17.6■□□□□ 0.41
APOE-205ENST00000485628 TMEM106CQ9BVX2 250 aa17.6■□□□□ 0.41
APOE-205ENST00000485628 LRRC27Q9C0I9 530 aa17.6■□□□□ 0.41
APOE-205ENST00000485628 TUBE1Q9UJT0 475 aa17.6■□□□□ 0.41
APOE-205ENST00000485628 PCDHA2Q9Y5H9 948 aa17.6■□□□□ 0.41
APOE-205ENST00000485628 NPHP3-ACAD11A0A0J9YXS1 232 aa17.59■□□□□ 0.41
APOE-205ENST00000485628 A0A0U1RQG5 324 aaPredicted RBP17.59■□□□□ 0.41
APOE-205ENST00000485628 PVALEFA0A1B0GWK0 134 aa17.59■□□□□ 0.41
APOE-205ENST00000485628 ARVCFO00192 962 aa17.59■□□□□ 0.41
APOE-205ENST00000485628 CASP1P29466 404 aa17.59■□□□□ 0.41
APOE-205ENST00000485628 ARL2P36404 184 aa17.59■□□□□ 0.41
APOE-205ENST00000485628 AFMP43652 599 aa17.59■□□□□ 0.41
APOE-205ENST00000485628 RTP1P59025 263 aa17.59■□□□□ 0.41
APOE-205ENST00000485628 EMC2Q15006 297 aa17.59■□□□□ 0.41
APOE-205ENST00000485628 RPAINQ86UA6 219 aa17.59■□□□□ 0.41
APOE-205ENST00000485628 MCPH1Q8NEM0 835 aa17.59■□□□□ 0.41
APOE-205ENST00000485628 DIS3LQ8TF46 1054 aaKnown RBP17.59■□□□□ 0.41
APOE-205ENST00000485628 REEP2Q9BRK0 252 aa17.59■□□□□ 0.41
APOE-205ENST00000485628 STARD7Q9NQZ5 370 aa17.59■□□□□ 0.41
APOE-205ENST00000485628 ODF2LQ9ULJ1 636 aa17.59■□□□□ 0.41
APOE-205ENST00000485628 MYH11P35749 1972 aa17.59■□□□□ 0.41
APOE-205ENST00000485628 C17orf102A2RUQ5 167 aa17.58■□□□□ 0.4
APOE-205ENST00000485628 TREHO43280 583 aa17.58■□□□□ 0.4
APOE-205ENST00000485628 USO1O60763 962 aaKnown RBP17.58■□□□□ 0.4
APOE-205ENST00000485628 ZNF200P98182 395 aaPredicted RBP17.58■□□□□ 0.4
APOE-205ENST00000485628 TBC1D8BQ0IIM8 1120 aa17.58■□□□□ 0.4
APOE-205ENST00000485628 DRP2Q13474 957 aa17.58■□□□□ 0.4
APOE-205ENST00000485628 PNOCQ13519 176 aa17.58■□□□□ 0.4
APOE-205ENST00000485628 DHX8Q14562 1220 aaKnown RBP17.58■□□□□ 0.4
APOE-205ENST00000485628 SERINC5Q86VE9 423 aa17.58■□□□□ 0.4
APOE-205ENST00000485628 KIAA0319LQ8IZA0 1049 aa17.58■□□□□ 0.4
APOE-205ENST00000485628 C7orf31Q8N865 590 aa17.58■□□□□ 0.4
APOE-205ENST00000485628 PPP1R13LQ8WUF5 828 aa17.58■□□□□ 0.4
APOE-205ENST00000485628 ZBTB10Q96DT7 871 aa17.58■□□□□ 0.4
APOE-205ENST00000485628 JPH2Q9BR39 696 aaPredicted RBP17.58■□□□□ 0.4
APOE-205ENST00000485628 NTPCRQ9BSD7 190 aaKnown RBP17.58■□□□□ 0.4
APOE-205ENST00000485628 ATP6V0A4Q9HBG4 840 aa17.58■□□□□ 0.4
APOE-205ENST00000485628 PCDHA5Q9Y5H7 936 aa17.58■□□□□ 0.4
APOE-205ENST00000485628 SMIM35A0A1B0GVV1 85 aa17.57■□□□□ 0.4
APOE-205ENST00000485628 RSPH10B2B2RC85 870 aa17.57■□□□□ 0.4
APOE-205ENST00000485628 CD4P01730 458 aa17.57■□□□□ 0.4
APOE-205ENST00000485628 RSPH10BP0C881 870 aa17.57■□□□□ 0.4
APOE-205ENST00000485628 GNAT1P11488 350 aa17.57■□□□□ 0.4
APOE-205ENST00000485628 KCNB1Q14721 858 aa17.57■□□□□ 0.4
APOE-205ENST00000485628 CCDC183Q5T5S1 534 aa17.57■□□□□ 0.4
APOE-205ENST00000485628 IER5Q5VY09 327 aa17.57■□□□□ 0.4
APOE-205ENST00000485628 EFCAB12Q6NXP0 572 aa17.57■□□□□ 0.4
APOE-205ENST00000485628 SLC39A5Q6ZMH5 540 aa17.57■□□□□ 0.4
APOE-205ENST00000485628 UNC13DQ70J99 1090 aa17.57■□□□□ 0.4
APOE-205ENST00000485628 ANKRD33Q7Z3H0 272 aa17.57■□□□□ 0.4
APOE-205ENST00000485628 SLC7A3Q8WY07 619 aa17.57■□□□□ 0.4
APOE-205ENST00000485628 GSDMAQ96QA5 445 aa17.57■□□□□ 0.4
APOE-205ENST00000485628 NUP62CLQ9H1M0 184 aa17.57■□□□□ 0.4
APOE-205ENST00000485628 BLZF1Q9H2G9 400 aa17.57■□□□□ 0.4
APOE-205ENST00000485628 KIAA1468Q9P260 1216 aa17.57■□□□□ 0.4
APOE-205ENST00000485628 MKI67P46013 3256 aaKnown RBP17.57■□□□□ 0.4
APOE-205ENST00000485628 HIP1RO75146 1068 aa17.56■□□□□ 0.4
APOE-205ENST00000485628 RHOBTB3O94955 611 aa17.56■□□□□ 0.4
APOE-205ENST00000485628 MYCNP04198 464 aaPredicted RBP17.56■□□□□ 0.4
APOE-205ENST00000485628 SSBP05455 408 aaKnown RBP eCLIP17.56■□□□□ 0.4
APOE-205ENST00000485628 EN2P19622 333 aaPredicted RBP17.56■□□□□ 0.4
APOE-205ENST00000485628 POLGP54098 1239 aaPredicted RBP17.56■□□□□ 0.4
APOE-205ENST00000485628 SOX10P56693 466 aa17.56■□□□□ 0.4
APOE-205ENST00000485628 CAMK4Q16566 473 aa17.56■□□□□ 0.4
APOE-205ENST00000485628 TRIM71Q2Q1W2 868 aaKnown RBP17.56■□□□□ 0.4
APOE-205ENST00000485628 RUFY4Q6ZNE9 571 aa17.56■□□□□ 0.4
APOE-205ENST00000485628 DYMQ7RTS9 669 aa17.56■□□□□ 0.4
APOE-205ENST00000485628 FAM126BQ8IXS8 530 aa17.56■□□□□ 0.4
APOE-205ENST00000485628 KIFAP3Q92845 792 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms