RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 ZNF654Q8IZM8 581 aa13.96□□□□□ -0.17
SSR4-210ENST00000485612 CMTR1Q8N1G2 835 aaKnown RBP13.96□□□□□ -0.17
SSR4-210ENST00000485612 GIMAP8Q8ND71 665 aaPredicted RBP13.96□□□□□ -0.17
SSR4-210ENST00000485612 RUFY2Q8WXA3 655 aa13.96□□□□□ -0.17
SSR4-210ENST00000485612 GLG1Q92896 1179 aa13.96□□□□□ -0.17
SSR4-210ENST00000485612 CHAMP1Q96JM3 812 aa13.96□□□□□ -0.17
SSR4-210ENST00000485612 ADAM2Q99965 735 aa13.96□□□□□ -0.17
SSR4-210ENST00000485612 KCNK12Q9HB15 430 aa13.96□□□□□ -0.17
SSR4-210ENST00000485612 RGS18Q9NS28 235 aa13.96□□□□□ -0.17
SSR4-210ENST00000485612 C1orf112Q9NSG2 853 aa13.96□□□□□ -0.17
SSR4-210ENST00000485612 RBM8AQ9Y5S9 174 aaKnown RBP13.96□□□□□ -0.17
SSR4-210ENST00000485612 DENND3A2RUS2 1198 aa13.95□□□□□ -0.18
SSR4-210ENST00000485612 MEIS2O14770 477 aa13.95□□□□□ -0.18
SSR4-210ENST00000485612 INSRRP14616 1297 aa13.95□□□□□ -0.18
SSR4-210ENST00000485612 RXRAP19793 462 aa13.95□□□□□ -0.18
SSR4-210ENST00000485612 TBC1D8BQ0IIM8 1120 aa13.95□□□□□ -0.18
SSR4-210ENST00000485612 SART3Q15020 963 aaKnown RBP13.95□□□□□ -0.18
SSR4-210ENST00000485612 XRRA1Q6P2D8 792 aa13.95□□□□□ -0.18
SSR4-210ENST00000485612 KCNT2Q6UVM3 1135 aa13.95□□□□□ -0.18
SSR4-210ENST00000485612 FAM43BQ6ZT52 329 aaPredicted RBP13.95□□□□□ -0.18
SSR4-210ENST00000485612 SLC24A5Q71RS6 500 aa13.95□□□□□ -0.18
SSR4-210ENST00000485612 OTOP3Q7RTS5 596 aa13.95□□□□□ -0.18
SSR4-210ENST00000485612 RAB11FIP4Q86YS3 637 aa13.95□□□□□ -0.18
SSR4-210ENST00000485612 SUMF1Q8NBK3 374 aa13.95□□□□□ -0.18
SSR4-210ENST00000485612 SEPT1Q8WYJ6 367 aa13.95□□□□□ -0.18
SSR4-210ENST00000485612 MAP4K1Q92918 833 aa13.95□□□□□ -0.18
SSR4-210ENST00000485612 SPZ1Q9BXG8 430 aa13.95□□□□□ -0.18
SSR4-210ENST00000485612 SMARCAD1Q9H4L7 1026 aa13.95□□□□□ -0.18
SSR4-210ENST00000485612 ATP6V0A4Q9HBG4 840 aa13.95□□□□□ -0.18
SSR4-210ENST00000485612 WNT16Q9UBV4 365 aa13.95□□□□□ -0.18
SSR4-210ENST00000485612 TPRP12270 2363 aaKnown RBP13.95□□□□□ -0.18
SSR4-210ENST00000485612 GSTTP1A0A1W2PQM5 241 aa13.94□□□□□ -0.18
SSR4-210ENST00000485612 hCG_1642624A0A1W2PR95 340 aa13.94□□□□□ -0.18
SSR4-210ENST00000485612 CFHP08603 1231 aa13.94□□□□□ -0.18
SSR4-210ENST00000485612 FGFR1P11362 822 aa13.94□□□□□ -0.18
SSR4-210ENST00000485612 CA8P35219 290 aa13.94□□□□□ -0.18
SSR4-210ENST00000485612 PPM1AP35813 382 aa13.94□□□□□ -0.18
SSR4-210ENST00000485612 PBX3P40426 434 aa13.94□□□□□ -0.18
SSR4-210ENST00000485612 KRT76Q01546 638 aa13.94□□□□□ -0.18
SSR4-210ENST00000485612 TRAF1Q13077 416 aa13.94□□□□□ -0.18
SSR4-210ENST00000485612 SPECC1Q5M775 1068 aa13.94□□□□□ -0.18
SSR4-210ENST00000485612 SRBD1Q8N5C6 995 aaKnown RBP13.94□□□□□ -0.18
SSR4-210ENST00000485612 SMARCC2Q8TAQ2 1214 aa13.94□□□□□ -0.18
SSR4-210ENST00000485612 ZNF558Q96NG5 402 aa13.94□□□□□ -0.18
SSR4-210ENST00000485612 DZANK1Q9NVP4 752 aa13.94□□□□□ -0.18
SSR4-210ENST00000485612 SPG21Q9NZD8 308 aa13.94□□□□□ -0.18
SSR4-210ENST00000485612 PCDHA2Q9Y5H9 948 aa13.94□□□□□ -0.18
SSR4-210ENST00000485612 KDM3AQ9Y4C1 1321 aa13.93□□□□□ -0.18
SSR4-210ENST00000485612 DCDC2BA2VCK2 349 aa13.93□□□□□ -0.18
SSR4-210ENST00000485612 KRBA1A5PL33 1030 aa13.93□□□□□ -0.18
SSR4-210ENST00000485612 C9IYK1 514 aa13.93□□□□□ -0.18
SSR4-210ENST00000485612 PRC1O43663 620 aa13.93□□□□□ -0.18
SSR4-210ENST00000485612 NARSO43776 548 aaKnown RBP13.93□□□□□ -0.18
SSR4-210ENST00000485612 ATP9AO75110 1047 aa13.93□□□□□ -0.18
SSR4-210ENST00000485612 RPS6KA5O75582 802 aa13.93□□□□□ -0.18
SSR4-210ENST00000485612 DDAH1O94760 285 aa13.93□□□□□ -0.18
SSR4-210ENST00000485612 CXCL14O95715 111 aa13.93□□□□□ -0.18
SSR4-210ENST00000485612 COL9A2Q14055 689 aaPredicted RBP13.93□□□□□ -0.18
SSR4-210ENST00000485612 BMS1Q14692 1282 aaKnown RBP13.93□□□□□ -0.18
SSR4-210ENST00000485612 UBE2SQ16763 222 aa13.93□□□□□ -0.18
SSR4-210ENST00000485612 VARS2Q5ST30 1063 aaKnown RBP13.93□□□□□ -0.18
SSR4-210ENST00000485612 PCNX4Q63HM2 1172 aa13.93□□□□□ -0.18
SSR4-210ENST00000485612 TMC5Q6UXY8 1006 aa13.93□□□□□ -0.18
SSR4-210ENST00000485612 LRRC55Q6ZSA7 311 aa13.93□□□□□ -0.18
SSR4-210ENST00000485612 NLRX1Q86UT6 975 aa13.93□□□□□ -0.18
SSR4-210ENST00000485612 C1orf210Q8IVY1 113 aa13.93□□□□□ -0.18
SSR4-210ENST00000485612 NME8Q8N427 588 aa13.93□□□□□ -0.18
SSR4-210ENST00000485612 GPR161Q8N6U8 529 aaKnown RBP13.93□□□□□ -0.18
SSR4-210ENST00000485612 TMEM87AQ8NBN3 555 aa13.93□□□□□ -0.18
SSR4-210ENST00000485612 CTCFLQ8NI51 663 aaPredicted RBP13.93□□□□□ -0.18
SSR4-210ENST00000485612 RRP36Q96EU6 259 aaKnown RBP13.93□□□□□ -0.18
SSR4-210ENST00000485612 TMEM117Q9H0C3 514 aa13.93□□□□□ -0.18
SSR4-210ENST00000485612 TMEM161AQ9NX61 479 aa13.93□□□□□ -0.18
SSR4-210ENST00000485612 NCDNQ9UBB6 729 aa13.93□□□□□ -0.18
SSR4-210ENST00000485612 RALYQ9UKM9 306 aaKnown RBP13.93□□□□□ -0.18
SSR4-210ENST00000485612 PRR5-ARHGAP8B1AHC4 643 aa13.92□□□□□ -0.18
SSR4-210ENST00000485612 SH2B2O14492 632 aaPredicted RBP13.92□□□□□ -0.18
SSR4-210ENST00000485612 KINO60870 393 aaKnown RBP13.92□□□□□ -0.18
SSR4-210ENST00000485612 DCNP07585 359 aaKnown RBP13.92□□□□□ -0.18
SSR4-210ENST00000485612 ADRB1P08588 477 aa13.92□□□□□ -0.18
SSR4-210ENST00000485612 KCNA2P16389 499 aa13.92□□□□□ -0.18
SSR4-210ENST00000485612 EPCAMP16422 314 aa13.92□□□□□ -0.18
SSR4-210ENST00000485612 FAM189BP81408 668 aa13.92□□□□□ -0.18
SSR4-210ENST00000485612 ARHGAP8P85298 464 aa13.92□□□□□ -0.18
SSR4-210ENST00000485612 ODR4Q5SWX8 454 aa13.92□□□□□ -0.18
SSR4-210ENST00000485612 CCDC149Q6ZUS6 474 aa13.92□□□□□ -0.18
SSR4-210ENST00000485612 TNPO1Q92973 898 aaKnown RBP13.92□□□□□ -0.18
SSR4-210ENST00000485612 CASD1Q96PB1 797 aa13.92□□□□□ -0.18
SSR4-210ENST00000485612 RTKNQ9BST9 563 aa13.92□□□□□ -0.18
SSR4-210ENST00000485612 LRRC2Q9BYS8 371 aa13.92□□□□□ -0.18
SSR4-210ENST00000485612 ELAC1Q9H777 363 aaKnown RBP13.92□□□□□ -0.18
SSR4-210ENST00000485612 TBC1D17Q9HA65 648 aa13.92□□□□□ -0.18
SSR4-210ENST00000485612 PKD2L1Q9P0L9 805 aa13.92□□□□□ -0.18
SSR4-210ENST00000485612 IGSF9Q9P2J2 1179 aa13.92□□□□□ -0.18
SSR4-210ENST00000485612 CDV3Q9UKY7 258 aaKnown RBP13.92□□□□□ -0.18
SSR4-210ENST00000485612 ST3GAL5Q9UNP4 418 aa13.92□□□□□ -0.18
SSR4-210ENST00000485612 GINS2Q9Y248 185 aa13.92□□□□□ -0.18
SSR4-210ENST00000485612 NOC2LQ9Y3T9 749 aaKnown RBP13.92□□□□□ -0.18
SSR4-210ENST00000485612 ACACBO00763 2458 aa13.91□□□□□ -0.18
SSR4-210ENST00000485612 SMIM35A0A1B0GVV1 85 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms