RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 SAMM50Q9Y512 469 aa21.79■■□□□ 1.08
COL27A1-205ENST00000485397 PCDHGC5Q9Y5F6 944 aa21.79■■□□□ 1.08
COL27A1-205ENST00000485397 CLCN3P51790 818 aa21.78■■□□□ 1.08
COL27A1-205ENST00000485397 ODR4Q5SWX8 454 aa21.78■■□□□ 1.08
COL27A1-205ENST00000485397 SPOUT1Q5T280 376 aaKnown RBP21.78■■□□□ 1.08
COL27A1-205ENST00000485397 BICD2Q8TD16 824 aa21.78■■□□□ 1.08
COL27A1-205ENST00000485397 CD207Q9UJ71 328 aa21.78■■□□□ 1.08
COL27A1-205ENST00000485397 PRR33A8MZF0 331 aa21.77■■□□□ 1.08
COL27A1-205ENST00000485397 DCXO43602 365 aa21.77■■□□□ 1.08
COL27A1-205ENST00000485397 IFNAR1P17181 557 aa21.77■■□□□ 1.08
COL27A1-205ENST00000485397 PDIA3P30101 505 aaKnown RBP21.77■■□□□ 1.08
COL27A1-205ENST00000485397 NDUFV1P49821 464 aa21.77■■□□□ 1.08
COL27A1-205ENST00000485397 SMAD4Q13485 552 aaKnown RBP21.77■■□□□ 1.08
COL27A1-205ENST00000485397 RBM23Q86U06 439 aaKnown RBP21.77■■□□□ 1.08
COL27A1-205ENST00000485397 CCDC148Q8NFR7 591 aa21.77■■□□□ 1.08
COL27A1-205ENST00000485397 PPP2R3CQ969Q6 453 aa21.77■■□□□ 1.08
COL27A1-205ENST00000485397 WDR64B1ANS9 1081 aa21.76■■□□□ 1.07
COL27A1-205ENST00000485397 MSH4O15457 936 aa21.76■■□□□ 1.07
COL27A1-205ENST00000485397 MAGEB2O15479 319 aa21.76■■□□□ 1.07
COL27A1-205ENST00000485397 ZNF862O60290 1169 aa21.76■■□□□ 1.07
COL27A1-205ENST00000485397 FGFR1P11362 822 aa21.76■■□□□ 1.07
COL27A1-205ENST00000485397 PSMA5P28066 241 aa21.76■■□□□ 1.07
COL27A1-205ENST00000485397 NRIP1P48552 1158 aa21.76■■□□□ 1.07
COL27A1-205ENST00000485397 DSC3Q14574 896 aa21.76■■□□□ 1.07
COL27A1-205ENST00000485397 EFCAB12Q6NXP0 572 aa21.76■■□□□ 1.07
COL27A1-205ENST00000485397 FAM43BQ6ZT52 329 aaPredicted RBP21.76■■□□□ 1.07
COL27A1-205ENST00000485397 LRRC71Q8N4P6 559 aa21.76■■□□□ 1.07
COL27A1-205ENST00000485397 LINC01465Q8N7H1 131 aa21.76■■□□□ 1.07
COL27A1-205ENST00000485397 GJA10Q969M2 543 aa21.76■■□□□ 1.07
COL27A1-205ENST00000485397 CCDC136Q96JN2 1154 aa21.76■■□□□ 1.07
COL27A1-205ENST00000485397 MSLNLQ96KJ4 702 aa21.76■■□□□ 1.07
COL27A1-205ENST00000485397 DISC1Q9NRI5 854 aa21.76■■□□□ 1.07
COL27A1-205ENST00000485397 TYW1Q9NV66 732 aaKnown RBP21.76■■□□□ 1.07
COL27A1-205ENST00000485397 CLEC1BQ9P126 229 aa21.76■■□□□ 1.07
COL27A1-205ENST00000485397 CEP131Q9UPN4 1083 aa21.76■■□□□ 1.07
COL27A1-205ENST00000485397 ARIH1Q9Y4X5 557 aaPredicted RBP21.76■■□□□ 1.07
COL27A1-205ENST00000485397 PCDHB12Q9Y5F1 795 aa21.76■■□□□ 1.07
COL27A1-205ENST00000485397 EVCP57679 992 aa21.75■■□□□ 1.07
COL27A1-205ENST00000485397 NLRP11P59045 1033 aaKnown RBP21.75■■□□□ 1.07
COL27A1-205ENST00000485397 FAM189BP81408 668 aa21.75■■□□□ 1.07
COL27A1-205ENST00000485397 EFHBQ8N7U6 833 aa21.75■■□□□ 1.07
COL27A1-205ENST00000485397 ZNF668Q96K58 619 aaPredicted RBP21.75■■□□□ 1.07
COL27A1-205ENST00000485397 FAM167AQ96KS9 214 aa21.75■■□□□ 1.07
COL27A1-205ENST00000485397 ATP6V0A4Q9HBG4 840 aa21.75■■□□□ 1.07
COL27A1-205ENST00000485397 TMEM161AQ9NX61 479 aa21.75■■□□□ 1.07
COL27A1-205ENST00000485397 AKT3Q9Y243 479 aa21.75■■□□□ 1.07
COL27A1-205ENST00000485397 MYH9P35579 1960 aaKnown RBP21.75■■□□□ 1.07
COL27A1-205ENST00000485397 CHMP2AO43633 222 aa21.74■■□□□ 1.07
COL27A1-205ENST00000485397 OATP04181 439 aa21.74■■□□□ 1.07
COL27A1-205ENST00000485397 NLRP5P59047 1200 aa21.74■■□□□ 1.07
COL27A1-205ENST00000485397 UGCGQ16739 394 aa21.74■■□□□ 1.07
COL27A1-205ENST00000485397 MICAL1Q8TDZ2 1067 aa21.74■■□□□ 1.07
COL27A1-205ENST00000485397 ADAMTS10Q9H324 1103 aa21.74■■□□□ 1.07
COL27A1-205ENST00000485397 CWH43Q9H720 699 aa21.74■■□□□ 1.07
COL27A1-205ENST00000485397 AAASQ9NRG9 546 aa21.74■■□□□ 1.07
COL27A1-205ENST00000485397 NRBP2Q9NSY0 501 aa21.74■■□□□ 1.07
COL27A1-205ENST00000485397 RNF216Q9NWF9 866 aaPredicted RBP21.74■■□□□ 1.07
COL27A1-205ENST00000485397 FNDC1Q4ZHG4 1894 aaPredicted RBP21.74■■□□□ 1.07
COL27A1-205ENST00000485397 PER2O15055 1255 aa21.73■■□□□ 1.07
COL27A1-205ENST00000485397 FGF18O76093 207 aa21.73■■□□□ 1.07
COL27A1-205ENST00000485397 REC8O95072 547 aa21.73■■□□□ 1.07
COL27A1-205ENST00000485397 GLP2RO95838 553 aa21.73■■□□□ 1.07
COL27A1-205ENST00000485397 USP11P51784 963 aa21.73■■□□□ 1.07
COL27A1-205ENST00000485397 PRKCEQ02156 737 aa21.73■■□□□ 1.07
COL27A1-205ENST00000485397 TOB2Q14106 344 aaPredicted RBP21.73■■□□□ 1.07
COL27A1-205ENST00000485397 COLGALT1Q8NBJ5 622 aa21.73■■□□□ 1.07
COL27A1-205ENST00000485397 SLC5A5Q92911 643 aa21.73■■□□□ 1.07
COL27A1-205ENST00000485397 MAP7D2Q96T17 732 aa21.73■■□□□ 1.07
COL27A1-205ENST00000485397 UPF3BQ9BZI7 483 aaKnown RBP21.73■■□□□ 1.07
COL27A1-205ENST00000485397 UNC45AQ9H3U1 944 aa21.73■■□□□ 1.07
COL27A1-205ENST00000485397 ELAC1Q9H777 363 aaKnown RBP21.73■■□□□ 1.07
COL27A1-205ENST00000485397 SH3GLB2Q9NR46 395 aa21.73■■□□□ 1.07
COL27A1-205ENST00000485397 RNF19AQ9NV58 838 aa21.73■■□□□ 1.07
COL27A1-205ENST00000485397 BARX2Q9UMQ3 279 aaPredicted RBP21.73■■□□□ 1.07
COL27A1-205ENST00000485397 PLXNA4Q9HCM2 1894 aa21.73■■□□□ 1.07
COL27A1-205ENST00000485397 GAS7O60861 476 aa21.72■■□□□ 1.07
COL27A1-205ENST00000485397 EYA4O95677 639 aa21.72■■□□□ 1.07
COL27A1-205ENST00000485397 TMOD1P28289 359 aa21.72■■□□□ 1.07
COL27A1-205ENST00000485397 ERVFC1P60507 584 aa21.72■■□□□ 1.07
COL27A1-205ENST00000485397 UBE3AQ05086 875 aa21.72■■□□□ 1.07
COL27A1-205ENST00000485397 CSPP1Q1MSJ5 1256 aa21.72■■□□□ 1.07
COL27A1-205ENST00000485397 LRCH2Q5VUJ6 765 aa21.72■■□□□ 1.07
COL27A1-205ENST00000485397 RUFY3Q7L099 469 aa21.72■■□□□ 1.07
COL27A1-205ENST00000485397 THNSL1Q8IYQ7 743 aa21.72■■□□□ 1.07
COL27A1-205ENST00000485397 TBCKQ8TEA7 893 aa21.72■■□□□ 1.07
COL27A1-205ENST00000485397 POP1Q99575 1024 aaKnown RBP21.72■■□□□ 1.07
COL27A1-205ENST00000485397 RIT2Q99578 217 aa21.72■■□□□ 1.07
COL27A1-205ENST00000485397 LARP6Q9BRS8 491 aaKnown RBP21.72■■□□□ 1.07
COL27A1-205ENST00000485397 TEKT3Q9BXF9 490 aa21.72■■□□□ 1.07
COL27A1-205ENST00000485397 TLE6Q9H808 572 aa21.72■■□□□ 1.07
COL27A1-205ENST00000485397 TLR9Q9NR96 1032 aa21.72■■□□□ 1.07
COL27A1-205ENST00000485397 RBM10P98175 930 aaKnown RBP21.71■■□□□ 1.07
COL27A1-205ENST00000485397 SSRP1Q08945 709 aaKnown RBP21.71■■□□□ 1.07
COL27A1-205ENST00000485397 LRRC55Q6ZSA7 311 aa21.71■■□□□ 1.07
COL27A1-205ENST00000485397 CASD1Q96PB1 797 aa21.71■■□□□ 1.07
COL27A1-205ENST00000485397 TMEM117Q9H0C3 514 aa21.71■■□□□ 1.07
COL27A1-205ENST00000485397 ZSWIM6Q9HCJ5 1215 aa21.71■■□□□ 1.07
COL27A1-205ENST00000485397 MUTYHQ9UIF7 546 aa21.71■■□□□ 1.07
COL27A1-205ENST00000485397 TDP2O95551 362 aa21.7■■□□□ 1.06
COL27A1-205ENST00000485397 ZSCAN20P17040 1043 aaPredicted RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms