RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 ALG13Q9NP73 1137 aaKnown RBP12.96□□□□□ -0.34
SCFD1-206ENST00000484733 DISC1Q9NRI5 854 aa12.96□□□□□ -0.34
SCFD1-206ENST00000484733 CYP46A1Q9Y6A2 500 aa12.96□□□□□ -0.34
SCFD1-206ENST00000484733 BRWD1Q9NSI6 2320 aa12.96□□□□□ -0.34
SCFD1-206ENST00000484733 BDP1A6H8Y1 2624 aa12.95□□□□□ -0.34
SCFD1-206ENST00000484733 DENND3A2RUS2 1198 aa12.95□□□□□ -0.34
SCFD1-206ENST00000484733 OATP04181 439 aa12.95□□□□□ -0.34
SCFD1-206ENST00000484733 DNAJB1P25685 340 aa12.95□□□□□ -0.34
SCFD1-206ENST00000484733 JAK3P52333 1124 aa12.95□□□□□ -0.34
SCFD1-206ENST00000484733 NLRP5P59047 1200 aa12.95□□□□□ -0.34
SCFD1-206ENST00000484733 PAN2Q504Q3 1202 aaKnown RBP12.95□□□□□ -0.34
SCFD1-206ENST00000484733 GALNT17Q6IS24 598 aa12.95□□□□□ -0.34
SCFD1-206ENST00000484733 MOXD1Q6UVY6 613 aa12.95□□□□□ -0.34
SCFD1-206ENST00000484733 DAGLBQ8NCG7 672 aa12.95□□□□□ -0.34
SCFD1-206ENST00000484733 ADAMTS10Q9H324 1103 aa12.95□□□□□ -0.34
SCFD1-206ENST00000484733 NCOA5Q9HCD5 579 aaKnown RBP12.95□□□□□ -0.34
SCFD1-206ENST00000484733 C11orf16Q9NQ32 467 aa12.95□□□□□ -0.34
SCFD1-206ENST00000484733 TMEM161AQ9NX61 479 aa12.95□□□□□ -0.34
SCFD1-206ENST00000484733 PCDHA4Q9UN74 947 aa12.95□□□□□ -0.34
SCFD1-206ENST00000484733 M0R2N6 131 aa12.95□□□□□ -0.34
SCFD1-206ENST00000484733 TMOD1P28289 359 aa12.95□□□□□ -0.34
SCFD1-206ENST00000484733 GATMP50440 423 aa12.95□□□□□ -0.34
SCFD1-206ENST00000484733 ZP2Q05996 745 aa12.95□□□□□ -0.34
SCFD1-206ENST00000484733 SMAD2Q15796 467 aaKnown RBP12.95□□□□□ -0.34
SCFD1-206ENST00000484733 KIZQ2M2Z5 673 aa12.95□□□□□ -0.34
SCFD1-206ENST00000484733 ADHFE1Q8IWW8 467 aa12.95□□□□□ -0.34
SCFD1-206ENST00000484733 MBOAT7Q96N66 472 aa12.95□□□□□ -0.34
SCFD1-206ENST00000484733 UIMC1Q96RL1 719 aa12.95□□□□□ -0.34
SCFD1-206ENST00000484733 OSMRQ99650 979 aa12.95□□□□□ -0.34
SCFD1-206ENST00000484733 TEKT3Q9BXF9 490 aa12.95□□□□□ -0.34
SCFD1-206ENST00000484733 AAASQ9NRG9 546 aa12.95□□□□□ -0.34
SCFD1-206ENST00000484733 RAPGEFL1Q9UHV5 662 aa12.95□□□□□ -0.34
SCFD1-206ENST00000484733 GINS2Q9Y248 185 aa12.95□□□□□ -0.34
SCFD1-206ENST00000484733 MBTPS2O43462 519 aa12.94□□□□□ -0.34
SCFD1-206ENST00000484733 ZNF862O60290 1169 aa12.94□□□□□ -0.34
SCFD1-206ENST00000484733 PSMD10O75832 226 aa12.94□□□□□ -0.34
SCFD1-206ENST00000484733 DEXIO95424 95 aa12.94□□□□□ -0.34
SCFD1-206ENST00000484733 VTNP04004 478 aa12.94□□□□□ -0.34
SCFD1-206ENST00000484733 ALADP13716 330 aa12.94□□□□□ -0.34
SCFD1-206ENST00000484733 SMAD4Q13485 552 aaKnown RBP12.94□□□□□ -0.34
SCFD1-206ENST00000484733 CSPP1Q1MSJ5 1256 aa12.94□□□□□ -0.34
SCFD1-206ENST00000484733 EFCAB12Q6NXP0 572 aa12.94□□□□□ -0.34
SCFD1-206ENST00000484733 B3GNT9Q6UX72 402 aa12.94□□□□□ -0.34
SCFD1-206ENST00000484733 METTL13Q8N6R0 699 aa12.94□□□□□ -0.34
SCFD1-206ENST00000484733 EFHBQ8N7U6 833 aa12.94□□□□□ -0.34
SCFD1-206ENST00000484733 TBCKQ8TEA7 893 aa12.94□□□□□ -0.34
SCFD1-206ENST00000484733 POF1BQ8WVV4 589 aa12.94□□□□□ -0.34
SCFD1-206ENST00000484733 MAP7D2Q96T17 732 aa12.94□□□□□ -0.34
SCFD1-206ENST00000484733 ATP6V0A4Q9HBG4 840 aa12.94□□□□□ -0.34
SCFD1-206ENST00000484733 SAMM50Q9Y512 469 aa12.94□□□□□ -0.34
SCFD1-206ENST00000484733 PCDHB12Q9Y5F1 795 aa12.94□□□□□ -0.34
SCFD1-206ENST00000484733 GAS7O60861 476 aa12.94□□□□□ -0.34
SCFD1-206ENST00000484733 SSTR3P32745 418 aaPredicted RBP12.94□□□□□ -0.34
SCFD1-206ENST00000484733 TARBP2Q15633 366 aaKnown RBP12.94□□□□□ -0.34
SCFD1-206ENST00000484733 PDE12Q6L8Q7 609 aaKnown RBP12.94□□□□□ -0.34
SCFD1-206ENST00000484733 NIFKQ9BYG3 293 aaKnown RBP12.94□□□□□ -0.34
SCFD1-206ENST00000484733 UNC45AQ9H3U1 944 aa12.94□□□□□ -0.34
SCFD1-206ENST00000484733 CD207Q9UJ71 328 aa12.94□□□□□ -0.34
SCFD1-206ENST00000484733 XIRP2A4UGR9 3374 aa12.93□□□□□ -0.34
SCFD1-206ENST00000484733 PLXNA4Q9HCM2 1894 aa12.93□□□□□ -0.34
SCFD1-206ENST00000484733 TBKBP1A7MCY6 615 aa12.93□□□□□ -0.34
SCFD1-206ENST00000484733 HOXA2O43364 376 aa12.93□□□□□ -0.34
SCFD1-206ENST00000484733 EYA4O95677 639 aa12.93□□□□□ -0.34
SCFD1-206ENST00000484733 PLA2G5P39877 138 aa12.93□□□□□ -0.34
SCFD1-206ENST00000484733 CLCN3P51790 818 aa12.93□□□□□ -0.34
SCFD1-206ENST00000484733 CDC42EP1Q00587 391 aa12.93□□□□□ -0.34
SCFD1-206ENST00000484733 PRKCEQ02156 737 aa12.93□□□□□ -0.34
SCFD1-206ENST00000484733 DLX2Q07687 328 aaPredicted RBP12.93□□□□□ -0.34
SCFD1-206ENST00000484733 FAM102BQ5T8I3 360 aa12.93□□□□□ -0.34
SCFD1-206ENST00000484733 LRCH2Q5VUJ6 765 aa12.93□□□□□ -0.34
SCFD1-206ENST00000484733 EP400NLQ6ZTU2 488 aa12.93□□□□□ -0.34
SCFD1-206ENST00000484733 BLIDQ8IZY5 108 aa12.93□□□□□ -0.34
SCFD1-206ENST00000484733 MSLNLQ96KJ4 702 aa12.93□□□□□ -0.34
SCFD1-206ENST00000484733 CWH43Q9H720 699 aa12.93□□□□□ -0.34
SCFD1-206ENST00000484733 MUC3AQ02505 3323 aa12.93□□□□□ -0.34
SCFD1-206ENST00000484733 FSD2A1L4K1 749 aa12.93□□□□□ -0.34
SCFD1-206ENST00000484733 TBX10O75333 385 aa12.93□□□□□ -0.34
SCFD1-206ENST00000484733 EIF4BP23588 611 aaKnown RBP12.93□□□□□ -0.34
SCFD1-206ENST00000484733 NLRP11P59045 1033 aaKnown RBP12.93□□□□□ -0.34
SCFD1-206ENST00000484733 NPY5RQ15761 445 aa12.93□□□□□ -0.34
SCFD1-206ENST00000484733 CPLX2Q6PUV4 134 aaKnown RBP12.93□□□□□ -0.34
SCFD1-206ENST00000484733 COLGALT1Q8NBJ5 622 aa12.93□□□□□ -0.34
SCFD1-206ENST00000484733 UPF3BQ9BZI7 483 aaKnown RBP12.93□□□□□ -0.34
SCFD1-206ENST00000484733 TMEM117Q9H0C3 514 aa12.93□□□□□ -0.34
SCFD1-206ENST00000484733 IGFLR1Q9H665 355 aa12.93□□□□□ -0.34
SCFD1-206ENST00000484733 AKT3Q9Y243 479 aa12.93□□□□□ -0.34
SCFD1-206ENST00000484733 LZTS1Q9Y250 596 aa12.93□□□□□ -0.34
SCFD1-206ENST00000484733 PRR33A8MZF0 331 aa12.92□□□□□ -0.34
SCFD1-206ENST00000484733 CPLX1O14810 134 aa12.92□□□□□ -0.34
SCFD1-206ENST00000484733 FSCN2O14926 492 aa12.92□□□□□ -0.34
SCFD1-206ENST00000484733 LINC01565O15544 149 aa12.92□□□□□ -0.34
SCFD1-206ENST00000484733 PPFIA3O75145 1194 aa12.92□□□□□ -0.34
SCFD1-206ENST00000484733 STBD1O95210 358 aa12.92□□□□□ -0.34
SCFD1-206ENST00000484733 LAG3P18627 525 aa12.92□□□□□ -0.34
SCFD1-206ENST00000484733 GTF2F1P35269 517 aaKnown RBP eCLIP12.92□□□□□ -0.34
SCFD1-206ENST00000484733 IRS1P35568 1242 aa12.92□□□□□ -0.34
SCFD1-206ENST00000484733 GPC3P51654 580 aa12.92□□□□□ -0.34
SCFD1-206ENST00000484733 COASYQ13057 564 aa12.92□□□□□ -0.34
SCFD1-206ENST00000484733 UGCGQ16739 394 aa12.92□□□□□ -0.34
SCFD1-206ENST00000484733 XKR3Q5GH77 459 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms