RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 ADAT2Q7Z6V5 191 aaKnown RBP5.33□□□□□ -1.56
SPTA1-206ENST00000484520 EXOC6Q8TAG9 804 aa5.33□□□□□ -1.56
SPTA1-206ENST00000484520 KISS1RQ969F8 398 aaPredicted RBP5.33□□□□□ -1.56
SPTA1-206ENST00000484520 FGD4Q96M96 766 aa5.33□□□□□ -1.56
SPTA1-206ENST00000484520 MENTQ9BUN1 341 aa5.33□□□□□ -1.56
SPTA1-206ENST00000484520 BCL2L13Q9BXK5 485 aa5.33□□□□□ -1.56
SPTA1-206ENST00000484520 KLHL25Q9H0H3 589 aa5.33□□□□□ -1.56
SPTA1-206ENST00000484520 DDX21Q9NR30 783 aaKnown RBP eCLIP5.33□□□□□ -1.56
SPTA1-206ENST00000484520 TSC22D4Q9Y3Q8 395 aa5.33□□□□□ -1.56
SPTA1-206ENST00000484520 CCDC9Q9Y3X0 531 aaKnown RBP5.33□□□□□ -1.56
SPTA1-206ENST00000484520 NRAPQ86VF7 1730 aa5.33□□□□□ -1.56
SPTA1-206ENST00000484520 ATP10DQ9P241 1426 aa5.32□□□□□ -1.56
SPTA1-206ENST00000484520 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.32□□□□□ -1.56
SPTA1-206ENST00000484520 ELL2O00472 640 aaPredicted RBP5.32□□□□□ -1.56
SPTA1-206ENST00000484520 HMMRO75330 724 aa5.32□□□□□ -1.56
SPTA1-206ENST00000484520 ALDH1L1O75891 902 aa5.32□□□□□ -1.56
SPTA1-206ENST00000484520 ACVRL1P37023 503 aa5.32□□□□□ -1.56
SPTA1-206ENST00000484520 IRX6P78412 446 aaPredicted RBP5.32□□□□□ -1.56
SPTA1-206ENST00000484520 AMPD2Q01433 879 aa5.32□□□□□ -1.56
SPTA1-206ENST00000484520 PRR31Q5SQ13 230 aa5.32□□□□□ -1.56
SPTA1-206ENST00000484520 CRIP3Q6Q6R5 217 aa5.32□□□□□ -1.56
SPTA1-206ENST00000484520 DCP2Q8IU60 420 aaKnown RBP5.32□□□□□ -1.56
SPTA1-206ENST00000484520 TTLL6Q8N841 843 aa5.32□□□□□ -1.56
SPTA1-206ENST00000484520 PLEKHO2Q8TD55 490 aa5.32□□□□□ -1.56
SPTA1-206ENST00000484520 LCORQ96JN0 433 aaPredicted RBP5.32□□□□□ -1.56
SPTA1-206ENST00000484520 GBP3Q9H0R5 595 aa5.32□□□□□ -1.56
SPTA1-206ENST00000484520 ZBTB40Q9NUA8 1239 aa5.32□□□□□ -1.56
SPTA1-206ENST00000484520 MIS18AQ9NYP9 233 aa5.32□□□□□ -1.56
SPTA1-206ENST00000484520 PPP4R1LQ9P1A2 415 aa5.32□□□□□ -1.56
SPTA1-206ENST00000484520 USP35Q9P2H5 1018 aa5.32□□□□□ -1.56
SPTA1-206ENST00000484520 CGGBP1Q9UFW8 167 aaPredicted RBP5.32□□□□□ -1.56
SPTA1-206ENST00000484520 KDM3BQ7LBC6 1761 aa5.32□□□□□ -1.56
SPTA1-206ENST00000484520 DLG5Q8TDM6 1919 aa5.31□□□□□ -1.56
SPTA1-206ENST00000484520 TRBV23OR9-2A0A075B6M9 112 aa5.31□□□□□ -1.56
SPTA1-206ENST00000484520 CYR61O00622 381 aa5.31□□□□□ -1.56
SPTA1-206ENST00000484520 SGSM2O43147 1006 aa5.31□□□□□ -1.56
SPTA1-206ENST00000484520 LAMTOR5O43504 91 aa5.31□□□□□ -1.56
SPTA1-206ENST00000484520 PPM1BO75688 479 aa5.31□□□□□ -1.56
SPTA1-206ENST00000484520 EPHX1P07099 455 aa5.31□□□□□ -1.56
SPTA1-206ENST00000484520 ITGA1P56199 1179 aa5.31□□□□□ -1.56
SPTA1-206ENST00000484520 NEXNQ0ZGT2 675 aa5.31□□□□□ -1.56
SPTA1-206ENST00000484520 ICAM4Q14773 271 aa5.31□□□□□ -1.56
SPTA1-206ENST00000484520 C20orf194Q5TEA3 1177 aa5.31□□□□□ -1.56
SPTA1-206ENST00000484520 NPM2Q86SE8 214 aaKnown RBP5.31□□□□□ -1.56
SPTA1-206ENST00000484520 MIB1Q86YT6 1006 aa5.31□□□□□ -1.56
SPTA1-206ENST00000484520 RPAP2Q8IXW5 612 aaPredicted RBP5.31□□□□□ -1.56
SPTA1-206ENST00000484520 TMEM57Q8N5G2 664 aa5.31□□□□□ -1.56
SPTA1-206ENST00000484520 TMEM87AQ8NBN3 555 aa5.31□□□□□ -1.56
SPTA1-206ENST00000484520 GCC1Q96CN9 775 aa5.31□□□□□ -1.56
SPTA1-206ENST00000484520 GZF1Q9H116 711 aaPredicted RBP5.31□□□□□ -1.56
SPTA1-206ENST00000484520 MARCH2Q9P0N8 246 aa5.31□□□□□ -1.56
SPTA1-206ENST00000484520 PCDHB10Q9UN67 800 aa5.31□□□□□ -1.56
SPTA1-206ENST00000484520 KDM2BQ8NHM5 1336 aa5.3□□□□□ -1.56
SPTA1-206ENST00000484520 SCN11AQ9UI33 1791 aa5.3□□□□□ -1.56
SPTA1-206ENST00000484520 TCERG1O14776 1098 aaKnown RBP5.3□□□□□ -1.56
SPTA1-206ENST00000484520 B4GALT3O60512 393 aa5.3□□□□□ -1.56
SPTA1-206ENST00000484520 GNAI2P04899 355 aa5.3□□□□□ -1.56
SPTA1-206ENST00000484520 HSP90B1P14625 803 aaKnown RBP5.3□□□□□ -1.56
SPTA1-206ENST00000484520 EIF2S2P20042 333 aaKnown RBP5.3□□□□□ -1.56
SPTA1-206ENST00000484520 HSP90AB3PQ58FF7 597 aa5.3□□□□□ -1.56
SPTA1-206ENST00000484520 MBLAC2Q68D91 279 aa5.3□□□□□ -1.56
SPTA1-206ENST00000484520 KSR2Q6VAB6 950 aa5.3□□□□□ -1.56
SPTA1-206ENST00000484520 KRT27Q7Z3Y8 459 aa5.3□□□□□ -1.56
SPTA1-206ENST00000484520 DEFB132Q7Z7B7 95 aa5.3□□□□□ -1.56
SPTA1-206ENST00000484520 ZC3H18Q86VM9 953 aaKnown RBP5.3□□□□□ -1.56
SPTA1-206ENST00000484520 ARHGEF39Q8N4T4 335 aa5.3□□□□□ -1.56
SPTA1-206ENST00000484520 GIPC2Q8TF65 315 aa5.3□□□□□ -1.56
SPTA1-206ENST00000484520 DNAAF4Q8WXU2 420 aa5.3□□□□□ -1.56
SPTA1-206ENST00000484520 DPF3Q92784 378 aa5.3□□□□□ -1.56
SPTA1-206ENST00000484520 ZNF496Q96IT1 587 aaPredicted RBP5.3□□□□□ -1.56
SPTA1-206ENST00000484520 ZNF747Q9BV97 191 aa5.3□□□□□ -1.56
SPTA1-206ENST00000484520 KLC2Q9H0B6 622 aa5.3□□□□□ -1.56
SPTA1-206ENST00000484520 AP5M1Q9H0R1 490 aa5.3□□□□□ -1.56
SPTA1-206ENST00000484520 CLEC1BQ9P126 229 aa5.3□□□□□ -1.56
SPTA1-206ENST00000484520 CHPF2Q9P2E5 772 aa5.3□□□□□ -1.56
SPTA1-206ENST00000484520 SIPA1L3O60292 1781 aaPredicted RBP5.29□□□□□ -1.56
SPTA1-206ENST00000484520 RGPD5Q99666 1765 aa5.29□□□□□ -1.56
SPTA1-206ENST00000484520 SRCAPQ6ZRS2 3230 aa5.29□□□□□ -1.56
SPTA1-206ENST00000484520 KCPQ6ZWJ8 1503 aa5.29□□□□□ -1.56
SPTA1-206ENST00000484520 GRB10Q13322 594 aa5.29□□□□□ -1.56
SPTA1-206ENST00000484520 SURF1Q15526 300 aa5.29□□□□□ -1.56
SPTA1-206ENST00000484520 KRT24Q2M2I5 525 aa5.29□□□□□ -1.56
SPTA1-206ENST00000484520 HSP90AB4PQ58FF6 505 aa5.29□□□□□ -1.56
SPTA1-206ENST00000484520 LDLRAD1Q5T700 205 aa5.29□□□□□ -1.56
SPTA1-206ENST00000484520 KIF6Q6ZMV9 814 aa5.29□□□□□ -1.56
SPTA1-206ENST00000484520 CCDC81Q6ZN84 652 aa5.29□□□□□ -1.56
SPTA1-206ENST00000484520 TEX2Q8IWB9 1127 aa5.29□□□□□ -1.56
SPTA1-206ENST00000484520 LINS1Q8NG48 757 aa5.29□□□□□ -1.56
SPTA1-206ENST00000484520 PIGBQ92521 554 aa5.29□□□□□ -1.56
SPTA1-206ENST00000484520 VPS11Q9H270 941 aa5.29□□□□□ -1.56
SPTA1-206ENST00000484520 CD248Q9HCU0 757 aa5.29□□□□□ -1.56
SPTA1-206ENST00000484520 SUGT1Q9Y2Z0 365 aa5.29□□□□□ -1.56
SPTA1-206ENST00000484520 PCDHGB7Q9Y5F8 929 aa5.29□□□□□ -1.56
SPTA1-206ENST00000484520 PAPPAQ13219 1627 aa5.29□□□□□ -1.56
SPTA1-206ENST00000484520 RGPD2P0DJD1 1756 aa5.29□□□□□ -1.56
SPTA1-206ENST00000484520 COL15A1P39059 1388 aa5.29□□□□□ -1.56
SPTA1-206ENST00000484520 THSD7AQ9UPZ6 1657 aa5.28□□□□□ -1.56
SPTA1-206ENST00000484520 WNK3Q9BYP7 1800 aa5.28□□□□□ -1.56
SPTA1-206ENST00000484520 PI4KAP2A4QPH2 592 aa5.28□□□□□ -1.56
SPTA1-206ENST00000484520 NPEPPSL1A6NEC2 478 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms