RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 TBX3O15119 743 aa13.79□□□□□ -0.2
MSH5-216ENST00000484309 MAGEB2O15479 319 aa13.79□□□□□ -0.2
MSH5-216ENST00000484309 NEMFO60524 1076 aa13.79□□□□□ -0.2
MSH5-216ENST00000484309 RPS6KA5O75582 802 aa13.79□□□□□ -0.2
MSH5-216ENST00000484309 BAG4O95429 457 aaKnown RBP13.79□□□□□ -0.2
MSH5-216ENST00000484309 NLRP11P59045 1033 aaKnown RBP13.79□□□□□ -0.2
MSH5-216ENST00000484309 PSMC5P62195 406 aa13.79□□□□□ -0.2
MSH5-216ENST00000484309 HTRA4P83105 476 aaPredicted RBP13.79□□□□□ -0.2
MSH5-216ENST00000484309 CYP4A11Q02928 519 aa13.79□□□□□ -0.2
MSH5-216ENST00000484309 DRP2Q13474 957 aa13.79□□□□□ -0.2
MSH5-216ENST00000484309 GNL2Q13823 731 aaKnown RBP13.79□□□□□ -0.2
MSH5-216ENST00000484309 XKR3Q5GH77 459 aa13.79□□□□□ -0.2
MSH5-216ENST00000484309 RTN4RL1Q86UN2 441 aaPredicted RBP13.79□□□□□ -0.2
MSH5-216ENST00000484309 LINC01465Q8N7H1 131 aa13.79□□□□□ -0.2
MSH5-216ENST00000484309 DYDC2Q96IM9 177 aa13.79□□□□□ -0.2
MSH5-216ENST00000484309 LXNQ9BS40 222 aa13.79□□□□□ -0.2
MSH5-216ENST00000484309 C17orf80Q9BSJ5 609 aa13.79□□□□□ -0.2
MSH5-216ENST00000484309 TMX1Q9H3N1 280 aa13.79□□□□□ -0.2
MSH5-216ENST00000484309 PRDM6Q9NQX0 595 aa13.79□□□□□ -0.2
MSH5-216ENST00000484309 BMP2KQ9NSY1 1161 aaPredicted RBP13.79□□□□□ -0.2
MSH5-216ENST00000484309 RGL1Q9NZL6 768 aa13.79□□□□□ -0.2
MSH5-216ENST00000484309 INSL6Q9Y581 213 aa13.79□□□□□ -0.2
MSH5-216ENST00000484309 MGEA5O60502 916 aa13.78□□□□□ -0.2
MSH5-216ENST00000484309 GPR32O75388 356 aa13.78□□□□□ -0.2
MSH5-216ENST00000484309 MCM7P33993 719 aa13.78□□□□□ -0.2
MSH5-216ENST00000484309 TXKP42681 527 aa13.78□□□□□ -0.2
MSH5-216ENST00000484309 QARSP47897 775 aaKnown RBP13.78□□□□□ -0.2
MSH5-216ENST00000484309 NPEPPSP55786 919 aa13.78□□□□□ -0.2
MSH5-216ENST00000484309 SPIRE1Q08AE8 756 aa13.78□□□□□ -0.2
MSH5-216ENST00000484309 GRB10Q13322 594 aa13.78□□□□□ -0.2
MSH5-216ENST00000484309 CTTNQ14247 550 aaKnown RBP13.78□□□□□ -0.2
MSH5-216ENST00000484309 TARBP2Q15633 366 aaKnown RBP13.78□□□□□ -0.2
MSH5-216ENST00000484309 ANO5Q75V66 913 aa13.78□□□□□ -0.2
MSH5-216ENST00000484309 SLFN12Q8IYM2 578 aa13.78□□□□□ -0.2
MSH5-216ENST00000484309 ZNF579Q8NAF0 562 aaKnown RBP13.78□□□□□ -0.2
MSH5-216ENST00000484309 FBXO18Q8NFZ0 1043 aa13.78□□□□□ -0.2
MSH5-216ENST00000484309 TMX3Q96JJ7 454 aa13.78□□□□□ -0.2
MSH5-216ENST00000484309 SCLT1Q96NL6 688 aa13.78□□□□□ -0.2
MSH5-216ENST00000484309 NIFKQ9BYG3 293 aaKnown RBP13.78□□□□□ -0.2
MSH5-216ENST00000484309 TMEM60Q9H2L4 133 aa13.78□□□□□ -0.2
MSH5-216ENST00000484309 ERVK-5Q9HDB9 667 aa13.78□□□□□ -0.2
MSH5-216ENST00000484309 SQORQ9Y6N5 450 aa13.78□□□□□ -0.2
MSH5-216ENST00000484309 EYSQ5T1H1 3165 aa13.78□□□□□ -0.2
MSH5-216ENST00000484309 P4HBP07237 508 aaKnown RBP13.77□□□□□ -0.21
MSH5-216ENST00000484309 TMOD1P28289 359 aa13.77□□□□□ -0.21
MSH5-216ENST00000484309 CRYBB1P53674 252 aaPredicted RBP13.77□□□□□ -0.21
MSH5-216ENST00000484309 MYO7AQ13402 2215 aa13.77□□□□□ -0.21
MSH5-216ENST00000484309 NBR1Q14596 966 aa13.77□□□□□ -0.21
MSH5-216ENST00000484309 EPHA7Q15375 998 aa13.77□□□□□ -0.21
MSH5-216ENST00000484309 ZNF174Q15697 407 aa13.77□□□□□ -0.21
MSH5-216ENST00000484309 FAM228AQ86W67 206 aa13.77□□□□□ -0.21
MSH5-216ENST00000484309 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.77□□□□□ -0.21
MSH5-216ENST00000484309 SP7Q8TDD2 431 aaPredicted RBP13.77□□□□□ -0.21
MSH5-216ENST00000484309 TGS1Q96RS0 853 aaKnown RBP13.77□□□□□ -0.21
MSH5-216ENST00000484309 CEP89Q96ST8 783 aa13.77□□□□□ -0.21
MSH5-216ENST00000484309 TTC12Q9H892 705 aaPredicted RBP13.77□□□□□ -0.21
MSH5-216ENST00000484309 PLXNA4Q9HCM2 1894 aa13.77□□□□□ -0.21
MSH5-216ENST00000484309 PCDHA12Q9UN75 941 aa13.77□□□□□ -0.21
MSH5-216ENST00000484309 ST3GAL5Q9UNP4 418 aa13.77□□□□□ -0.21
MSH5-216ENST00000484309 TCF20Q9UGU0 1960 aaKnown RBP13.76□□□□□ -0.21
MSH5-216ENST00000484309 POTEMA6NI47 508 aa13.76□□□□□ -0.21
MSH5-216ENST00000484309 ZBTB39O15060 712 aa13.76□□□□□ -0.21
MSH5-216ENST00000484309 LPXNO60711 386 aa13.76□□□□□ -0.21
MSH5-216ENST00000484309 CSDE1O75534 798 aaKnown RBP13.76□□□□□ -0.21
MSH5-216ENST00000484309 FGFR4P22455 802 aa13.76□□□□□ -0.21
MSH5-216ENST00000484309 GATMP50440 423 aa13.76□□□□□ -0.21
MSH5-216ENST00000484309 GPC3P51654 580 aa13.76□□□□□ -0.21
MSH5-216ENST00000484309 ERVK-21P61565 698 aa13.76□□□□□ -0.21
MSH5-216ENST00000484309 NOSTRINQ8IVI9 506 aa13.76□□□□□ -0.21
MSH5-216ENST00000484309 TPH2Q8IWU9 490 aa13.76□□□□□ -0.21
MSH5-216ENST00000484309 NLRP7Q8WX94 980 aa13.76□□□□□ -0.21
MSH5-216ENST00000484309 EIF2AK1Q9BQI3 630 aaKnown RBP13.76□□□□□ -0.21
MSH5-216ENST00000484309 FTHL17Q9BXU8 183 aa13.76□□□□□ -0.21
MSH5-216ENST00000484309 TSPYL2Q9H2G4 693 aaPredicted RBP13.76□□□□□ -0.21
MSH5-216ENST00000484309 ADAMTS10Q9H324 1103 aa13.76□□□□□ -0.21
MSH5-216ENST00000484309 FOXP1Q9H334 677 aaPredicted RBP13.76□□□□□ -0.21
MSH5-216ENST00000484309 CYP26B1Q9NR63 512 aa13.76□□□□□ -0.21
MSH5-216ENST00000484309 GTF3C3Q9Y5Q9 886 aa13.76□□□□□ -0.21
MSH5-216ENST00000484309 MTCH2Q9Y6C9 303 aa13.76□□□□□ -0.21
MSH5-216ENST00000484309 BRWD1Q9NSI6 2320 aa13.76□□□□□ -0.21
MSH5-216ENST00000484309 ADGRA3Q8IWK6 1321 aa13.75□□□□□ -0.21
MSH5-216ENST00000484309 A0A087WWV3 80 aa13.75□□□□□ -0.21
MSH5-216ENST00000484309 DENND3A2RUS2 1198 aa13.75□□□□□ -0.21
MSH5-216ENST00000484309 GTPBP6O43824 516 aaPredicted RBP13.75□□□□□ -0.21
MSH5-216ENST00000484309 MAFO75444 373 aaPredicted RBP13.75□□□□□ -0.21
MSH5-216ENST00000484309 GJB2P29033 226 aa13.75□□□□□ -0.21
MSH5-216ENST00000484309 YWHABP31946 246 aaKnown RBP13.75□□□□□ -0.21
MSH5-216ENST00000484309 PAN2Q504Q3 1202 aaKnown RBP13.75□□□□□ -0.21
MSH5-216ENST00000484309 TTC38Q5R3I4 469 aa13.75□□□□□ -0.21
MSH5-216ENST00000484309 KSR1Q8IVT5 923 aa13.75□□□□□ -0.21
MSH5-216ENST00000484309 FIBCD1Q8N539 461 aa13.75□□□□□ -0.21
MSH5-216ENST00000484309 FBXO22Q8NEZ5 403 aa13.75□□□□□ -0.21
MSH5-216ENST00000484309 CEP170P1Q96L14 293 aa13.75□□□□□ -0.21
MSH5-216ENST00000484309 MTMR9Q96QG7 549 aa13.75□□□□□ -0.21
MSH5-216ENST00000484309 ADAM2Q99965 735 aa13.75□□□□□ -0.21
MSH5-216ENST00000484309 RC3H2Q9HBD1 1191 aaKnown RBP13.75□□□□□ -0.21
MSH5-216ENST00000484309 SUCLA2Q9P2R7 463 aaPredicted RBP13.75□□□□□ -0.21
MSH5-216ENST00000484309 A0A087WZ62 844 aa13.74□□□□□ -0.21
MSH5-216ENST00000484309 IGKV6-21A0A0C4DH24 114 aa13.74□□□□□ -0.21
MSH5-216ENST00000484309 GPR182O15218 404 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms