RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 SPATA31C1P0DKV0 1188 aa29.8■■■□□ 2.36
SMDT1-203ENST00000484235 CLCN3P51790 818 aa29.8■■■□□ 2.36
SMDT1-203ENST00000484235 NPEPPSP55786 919 aa29.8■■■□□ 2.36
SMDT1-203ENST00000484235 LPIN1Q14693 890 aa29.8■■■□□ 2.36
SMDT1-203ENST00000484235 TCTN1Q2MV58 587 aa29.8■■■□□ 2.36
SMDT1-203ENST00000484235 CATSPER3Q86XQ3 398 aa29.8■■■□□ 2.36
SMDT1-203ENST00000484235 LRRC71Q8N4P6 559 aa29.8■■■□□ 2.36
SMDT1-203ENST00000484235 IGSF22Q8N9C0 903 aa29.8■■■□□ 2.36
SMDT1-203ENST00000484235 APBB2Q92870 758 aa29.8■■■□□ 2.36
SMDT1-203ENST00000484235 MAP7D2Q96T17 732 aa29.8■■■□□ 2.36
SMDT1-203ENST00000484235 JPH2Q9BR39 696 aaPredicted RBP29.8■■■□□ 2.36
SMDT1-203ENST00000484235 IFIH1Q9BYX4 1025 aaKnown RBP29.8■■■□□ 2.36
SMDT1-203ENST00000484235 LRWD1Q9UFC0 647 aa29.8■■■□□ 2.36
SMDT1-203ENST00000484235 STK24Q9Y6E0 443 aa29.8■■■□□ 2.36
SMDT1-203ENST00000484235 ZBTB39O15060 712 aa29.79■■■□□ 2.36
SMDT1-203ENST00000484235 GHRP10912 638 aa29.79■■■□□ 2.36
SMDT1-203ENST00000484235 XRCC6P12956 609 aaKnown RBP eCLIP29.79■■■□□ 2.36
SMDT1-203ENST00000484235 DNM2P50570 870 aa29.79■■■□□ 2.36
SMDT1-203ENST00000484235 PHOSPHO2Q8TCD6 241 aa29.79■■■□□ 2.36
SMDT1-203ENST00000484235 ANKEF1Q9NU02 776 aa29.79■■■□□ 2.36
SMDT1-203ENST00000484235 PRUNE2Q8WUY3 3088 aa29.79■■■□□ 2.36
SMDT1-203ENST00000484235 RPA1P27694 616 aa29.78■■■□□ 2.36
SMDT1-203ENST00000484235 RESTQ13127 1097 aa29.78■■■□□ 2.36
SMDT1-203ENST00000484235 IL17AQ16552 155 aa29.78■■■□□ 2.36
SMDT1-203ENST00000484235 XKR9Q5GH70 373 aa29.78■■■□□ 2.36
SMDT1-203ENST00000484235 ARL6IP4Q66PJ3 421 aaKnown RBP29.78■■■□□ 2.36
SMDT1-203ENST00000484235 TSHZ1Q6ZSZ6 1077 aa29.78■■■□□ 2.36
SMDT1-203ENST00000484235 ZNF579Q8NAF0 562 aaKnown RBP29.78■■■□□ 2.36
SMDT1-203ENST00000484235 ZSCAN16Q9H4T2 348 aaPredicted RBP29.78■■■□□ 2.36
SMDT1-203ENST00000484235 AKT3Q9Y243 479 aa29.78■■■□□ 2.36
SMDT1-203ENST00000484235 TET1Q8NFU7 2136 aa29.78■■■□□ 2.36
SMDT1-203ENST00000484235 BMP15O95972 392 aa29.77■■■□□ 2.36
SMDT1-203ENST00000484235 VTNP04004 478 aa29.77■■■□□ 2.36
SMDT1-203ENST00000484235 ATP2A2P16615 1042 aaKnown RBP29.77■■■□□ 2.36
SMDT1-203ENST00000484235 RFC5P40937 340 aa29.77■■■□□ 2.36
SMDT1-203ENST00000484235 KCNJ6P48051 423 aa29.77■■■□□ 2.36
SMDT1-203ENST00000484235 CRYBB1P53674 252 aaPredicted RBP29.77■■■□□ 2.36
SMDT1-203ENST00000484235 CDC42EP1Q00587 391 aa29.77■■■□□ 2.36
SMDT1-203ENST00000484235 HAUS3Q68CZ6 603 aa29.77■■■□□ 2.36
SMDT1-203ENST00000484235 SLC7A3Q8WY07 619 aa29.77■■■□□ 2.36
SMDT1-203ENST00000484235 MYLIPQ8WY64 445 aa29.77■■■□□ 2.36
SMDT1-203ENST00000484235 GINS2Q9Y248 185 aa29.77■■■□□ 2.36
SMDT1-203ENST00000484235 CDH23Q9H251 3354 aa29.77■■■□□ 2.36
SMDT1-203ENST00000484235 GPR32O75388 356 aa29.76■■■□□ 2.35
SMDT1-203ENST00000484235 MED24O75448 989 aa29.76■■■□□ 2.35
SMDT1-203ENST00000484235 MUTP22033 750 aa29.76■■■□□ 2.35
SMDT1-203ENST00000484235 WDR5P61964 334 aaKnown RBP29.76■■■□□ 2.35
SMDT1-203ENST00000484235 MKRN4PQ13434 485 aaPredicted RBP29.76■■■□□ 2.35
SMDT1-203ENST00000484235 KIZQ2M2Z5 673 aa29.76■■■□□ 2.35
SMDT1-203ENST00000484235 NACC1Q96RE7 527 aa29.76■■■□□ 2.35
SMDT1-203ENST00000484235 SLC9A7Q96T83 725 aa29.76■■■□□ 2.35
SMDT1-203ENST00000484235 DHX33Q9H6R0 707 aaKnown RBP29.76■■■□□ 2.35
SMDT1-203ENST00000484235 CDHR5Q9HBB8 845 aa29.76■■■□□ 2.35
SMDT1-203ENST00000484235 GRXCR1A8MXD5 290 aa29.75■■■□□ 2.35
SMDT1-203ENST00000484235 POLGP54098 1239 aaPredicted RBP29.75■■■□□ 2.35
SMDT1-203ENST00000484235 NLRP11P59045 1033 aaKnown RBP29.75■■■□□ 2.35
SMDT1-203ENST00000484235 SPRYD3Q8NCJ5 442 aa29.75■■■□□ 2.35
SMDT1-203ENST00000484235 MAFAQ8NHW3 353 aaPredicted RBP29.75■■■□□ 2.35
SMDT1-203ENST00000484235 PIGOQ8TEQ8 1089 aa29.75■■■□□ 2.35
SMDT1-203ENST00000484235 AGO3Q9H9G7 860 aaKnown RBP29.75■■■□□ 2.35
SMDT1-203ENST00000484235 TMEM265A0A087WTH1 108 aa29.74■■■□□ 2.35
SMDT1-203ENST00000484235 CCT6AP40227 531 aaKnown RBP29.74■■■□□ 2.35
SMDT1-203ENST00000484235 DRP2Q13474 957 aa29.74■■■□□ 2.35
SMDT1-203ENST00000484235 FAM43BQ6ZT52 329 aaPredicted RBP29.74■■■□□ 2.35
SMDT1-203ENST00000484235 ADAMTS10Q9H324 1103 aa29.74■■■□□ 2.35
SMDT1-203ENST00000484235 SUCLA2Q9P2R7 463 aaPredicted RBP29.74■■■□□ 2.35
SMDT1-203ENST00000484235 VCANP13611 3396 aa29.73■■■□□ 2.35
SMDT1-203ENST00000484235 RBAK-RBAKDNI3L0D1 243 aa29.73■■■□□ 2.35
SMDT1-203ENST00000484235 CD52P31358 61 aa29.73■■■□□ 2.35
SMDT1-203ENST00000484235 SF3A1Q15459 793 aaKnown RBP29.73■■■□□ 2.35
SMDT1-203ENST00000484235 CCDC43Q96MW1 224 aaKnown RBP29.73■■■□□ 2.35
SMDT1-203ENST00000484235 DBR1Q9UK59 544 aaKnown RBP29.73■■■□□ 2.35
SMDT1-203ENST00000484235 PADI3Q9ULW8 664 aa29.73■■■□□ 2.35
SMDT1-203ENST00000484235 GAS2O43903 313 aaKnown RBP29.72■■■□□ 2.35
SMDT1-203ENST00000484235 RARRES1P49788 294 aa29.72■■■□□ 2.35
SMDT1-203ENST00000484235 PAK2Q13177 524 aa29.72■■■□□ 2.35
SMDT1-203ENST00000484235 KRT79Q5XKE5 535 aa29.72■■■□□ 2.35
SMDT1-203ENST00000484235 PPP1R16BQ96T49 567 aa29.72■■■□□ 2.35
SMDT1-203ENST00000484235 OSMRQ99650 979 aa29.72■■■□□ 2.35
SMDT1-203ENST00000484235 PBX4Q9BYU1 374 aa29.72■■■□□ 2.35
SMDT1-203ENST00000484235 EVPLQ92817 2033 aa29.71■■■□□ 2.35
SMDT1-203ENST00000484235 A0A087WWV3 80 aa29.71■■■□□ 2.35
SMDT1-203ENST00000484235 VWA3AA6NCI4 1184 aa29.71■■■□□ 2.35
SMDT1-203ENST00000484235 RPS6KA5O75582 802 aa29.71■■■□□ 2.35
SMDT1-203ENST00000484235 GPC3P51654 580 aa29.71■■■□□ 2.35
SMDT1-203ENST00000484235 RAB30Q15771 203 aa29.71■■■□□ 2.35
SMDT1-203ENST00000484235 ODR4Q5SWX8 454 aa29.71■■■□□ 2.35
SMDT1-203ENST00000484235 FAM173BQ6P4H8 233 aa29.71■■■□□ 2.35
SMDT1-203ENST00000484235 POTEGQ6S5H5 508 aa29.71■■■□□ 2.35
SMDT1-203ENST00000484235 HERC6Q8IVU3 1022 aa29.71■■■□□ 2.35
SMDT1-203ENST00000484235 SNX29Q8TEQ0 813 aa29.71■■■□□ 2.35
SMDT1-203ENST00000484235 TMEM40Q8WWA1 233 aa29.71■■■□□ 2.35
SMDT1-203ENST00000484235 FTHL17Q9BXU8 183 aa29.71■■■□□ 2.35
SMDT1-203ENST00000484235 MSRAQ9UJ68 235 aa29.71■■■□□ 2.35
SMDT1-203ENST00000484235 NOC2LQ9Y3T9 749 aaKnown RBP29.71■■■□□ 2.35
SMDT1-203ENST00000484235 DGAT1O75907 488 aa29.7■■■□□ 2.35
SMDT1-203ENST00000484235 AMHP03971 560 aa29.7■■■□□ 2.35
SMDT1-203ENST00000484235 DEFB103AP81534 67 aa29.7■■■□□ 2.35
SMDT1-203ENST00000484235 BECN1Q14457 450 aa29.7■■■□□ 2.35
SMDT1-203ENST00000484235 EMC2Q15006 297 aa29.7■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms