RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 PRPHP41219 470 aa20.15■□□□□ 0.82
HDAC6-225ENST00000483506 RABGGTBP53611 331 aa20.15■□□□□ 0.82
HDAC6-225ENST00000483506 CRYBB1P53674 252 aaPredicted RBP20.15■□□□□ 0.82
HDAC6-225ENST00000483506 CYP4A11Q02928 519 aa20.15■□□□□ 0.82
HDAC6-225ENST00000483506 PTGDRQ13258 359 aa20.15■□□□□ 0.82
HDAC6-225ENST00000483506 CTTNQ14247 550 aaKnown RBP20.15■□□□□ 0.82
HDAC6-225ENST00000483506 PLA2G4FQ68DD2 849 aa20.15■□□□□ 0.82
HDAC6-225ENST00000483506 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.15■□□□□ 0.82
HDAC6-225ENST00000483506 EXOC8Q8IYI6 725 aa20.15■□□□□ 0.82
HDAC6-225ENST00000483506 LRRC71Q8N4P6 559 aa20.15■□□□□ 0.82
HDAC6-225ENST00000483506 ADAMTS10Q9H324 1103 aa20.15■□□□□ 0.82
HDAC6-225ENST00000483506 DHX33Q9H6R0 707 aaKnown RBP20.15■□□□□ 0.82
HDAC6-225ENST00000483506 TUFT1Q9NNX1 390 aa20.15■□□□□ 0.82
HDAC6-225ENST00000483506 CHD7Q9P2D1 2997 aa20.15■□□□□ 0.82
HDAC6-225ENST00000483506 COL4A6Q14031 1691 aa20.14■□□□□ 0.81
HDAC6-225ENST00000483506 AMHP03971 560 aa20.14■□□□□ 0.81
HDAC6-225ENST00000483506 VTNP04004 478 aa20.14■□□□□ 0.81
HDAC6-225ENST00000483506 SPATA31C1P0DKV0 1188 aa20.14■□□□□ 0.81
HDAC6-225ENST00000483506 CD52P31358 61 aa20.14■□□□□ 0.81
HDAC6-225ENST00000483506 TECP42680 631 aa20.14■□□□□ 0.81
HDAC6-225ENST00000483506 CDC42EP1Q00587 391 aa20.14■□□□□ 0.81
HDAC6-225ENST00000483506 OTUD6AQ7L8S5 288 aa20.14■□□□□ 0.81
HDAC6-225ENST00000483506 BRAPQ7Z569 592 aa20.14■□□□□ 0.81
HDAC6-225ENST00000483506 TPH2Q8IWU9 490 aa20.14■□□□□ 0.81
HDAC6-225ENST00000483506 TMEM40Q8WWA1 233 aa20.14■□□□□ 0.81
HDAC6-225ENST00000483506 POLR3CQ9BUI4 534 aaPredicted RBP20.14■□□□□ 0.81
HDAC6-225ENST00000483506 FTHL17Q9BXU8 183 aa20.14■□□□□ 0.81
HDAC6-225ENST00000483506 SUGCTQ9HAC7 445 aa20.14■□□□□ 0.81
HDAC6-225ENST00000483506 CDHR5Q9HBB8 845 aa20.14■□□□□ 0.81
HDAC6-225ENST00000483506 AKT3Q9Y243 479 aa20.14■□□□□ 0.81
HDAC6-225ENST00000483506 RFC5P40937 340 aa20.13■□□□□ 0.81
HDAC6-225ENST00000483506 NPEPPSP55786 919 aa20.13■□□□□ 0.81
HDAC6-225ENST00000483506 DRP2Q13474 957 aa20.13■□□□□ 0.81
HDAC6-225ENST00000483506 PDIA5Q14554 519 aa20.13■□□□□ 0.81
HDAC6-225ENST00000483506 KIZQ2M2Z5 673 aa20.13■□□□□ 0.81
HDAC6-225ENST00000483506 TMEM266Q2M3C6 531 aa20.13■□□□□ 0.81
HDAC6-225ENST00000483506 IGSF22Q8N9C0 903 aa20.13■□□□□ 0.81
HDAC6-225ENST00000483506 ZNF579Q8NAF0 562 aaKnown RBP20.13■□□□□ 0.81
HDAC6-225ENST00000483506 CEP170P1Q96L14 293 aa20.13■□□□□ 0.81
HDAC6-225ENST00000483506 GUCD1Q96NT3 240 aa20.13■□□□□ 0.81
HDAC6-225ENST00000483506 SH2D3AQ9BRG2 576 aa20.13■□□□□ 0.81
HDAC6-225ENST00000483506 ZNF576Q9H609 170 aa20.13■□□□□ 0.81
HDAC6-225ENST00000483506 ERVK-5Q9HDB9 667 aa20.13■□□□□ 0.81
HDAC6-225ENST00000483506 ANKEF1Q9NU02 776 aa20.13■□□□□ 0.81
HDAC6-225ENST00000483506 PADI3Q9ULW8 664 aa20.13■□□□□ 0.81
HDAC6-225ENST00000483506 TTC3P53804 2025 aa20.13■□□□□ 0.81
HDAC6-225ENST00000483506 GAS2O43903 313 aaKnown RBP20.12■□□□□ 0.81
HDAC6-225ENST00000483506 XRCC6P12956 609 aaKnown RBP eCLIP20.12■□□□□ 0.81
HDAC6-225ENST00000483506 MYOGP15173 224 aa20.12■□□□□ 0.81
HDAC6-225ENST00000483506 SYT1P21579 422 aa20.12■□□□□ 0.81
HDAC6-225ENST00000483506 MUTP22033 750 aa20.12■□□□□ 0.81
HDAC6-225ENST00000483506 RPA1P27694 616 aa20.12■□□□□ 0.81
HDAC6-225ENST00000483506 GPC3P51654 580 aa20.12■□□□□ 0.81
HDAC6-225ENST00000483506 NLRP11P59045 1033 aaKnown RBP20.12■□□□□ 0.81
HDAC6-225ENST00000483506 ATP2C1P98194 919 aaPredicted RBP20.12■□□□□ 0.81
HDAC6-225ENST00000483506 PAK2Q13177 524 aa20.12■□□□□ 0.81
HDAC6-225ENST00000483506 ODR4Q5SWX8 454 aa20.12■□□□□ 0.81
HDAC6-225ENST00000483506 CATSPER3Q86XQ3 398 aa20.12■□□□□ 0.81
HDAC6-225ENST00000483506 HSCBQ8IWL3 235 aa20.12■□□□□ 0.81
HDAC6-225ENST00000483506 ERMNQ8TAM6 284 aa20.12■□□□□ 0.81
HDAC6-225ENST00000483506 LINC01599Q8WXQ3 324 aa20.12■□□□□ 0.81
HDAC6-225ENST00000483506 SLC7A3Q8WY07 619 aa20.12■□□□□ 0.81
HDAC6-225ENST00000483506 TOP1MTQ969P6 601 aa20.12■□□□□ 0.81
HDAC6-225ENST00000483506 OSMRQ99650 979 aa20.12■□□□□ 0.81
HDAC6-225ENST00000483506 NKX2-4Q9H2Z4 354 aa20.12■□□□□ 0.81
HDAC6-225ENST00000483506 NOC2LQ9Y3T9 749 aaKnown RBP20.12■□□□□ 0.81
HDAC6-225ENST00000483506 ENPP3O14638 875 aa20.11■□□□□ 0.81
HDAC6-225ENST00000483506 ZBTB39O15060 712 aa20.11■□□□□ 0.81
HDAC6-225ENST00000483506 TLL1O43897 1013 aa20.11■□□□□ 0.81
HDAC6-225ENST00000483506 MED24O75448 989 aa20.11■□□□□ 0.81
HDAC6-225ENST00000483506 RPS6KA5O75582 802 aa20.11■□□□□ 0.81
HDAC6-225ENST00000483506 DNM2P50570 870 aa20.11■□□□□ 0.81
HDAC6-225ENST00000483506 HTRA4P83105 476 aaPredicted RBP20.11■□□□□ 0.81
HDAC6-225ENST00000483506 TMCO2Q7Z6W1 182 aaPredicted RBP20.11■□□□□ 0.81
HDAC6-225ENST00000483506 MYOCDQ8IZQ8 938 aa20.11■□□□□ 0.81
HDAC6-225ENST00000483506 RAD9AQ99638 391 aa20.11■□□□□ 0.81
HDAC6-225ENST00000483506 TSPYL2Q9H2G4 693 aaPredicted RBP20.11■□□□□ 0.81
HDAC6-225ENST00000483506 TMX1Q9H3N1 280 aa20.11■□□□□ 0.81
HDAC6-225ENST00000483506 SLC28A3Q9HAS3 691 aa20.11■□□□□ 0.81
HDAC6-225ENST00000483506 GINS2Q9Y248 185 aa20.11■□□□□ 0.81
HDAC6-225ENST00000483506 STK24Q9Y6E0 443 aa20.11■□□□□ 0.81
HDAC6-225ENST00000483506 GPR182O15218 404 aa20.1■□□□□ 0.81
HDAC6-225ENST00000483506 CA3P07451 260 aa20.1■□□□□ 0.81
HDAC6-225ENST00000483506 EIF4BP23588 611 aaKnown RBP20.1■□□□□ 0.81
HDAC6-225ENST00000483506 POLGP54098 1239 aaPredicted RBP20.1■□□□□ 0.81
HDAC6-225ENST00000483506 IL17AQ16552 155 aa20.1■□□□□ 0.81
HDAC6-225ENST00000483506 XKR9Q5GH70 373 aa20.1■□□□□ 0.81
HDAC6-225ENST00000483506 HAUS3Q68CZ6 603 aa20.1■□□□□ 0.81
HDAC6-225ENST00000483506 ZNF410Q86VK4 478 aa20.1■□□□□ 0.81
HDAC6-225ENST00000483506 FAM228AQ86W67 206 aa20.1■□□□□ 0.81
HDAC6-225ENST00000483506 CRIPAKQ8N1N5 446 aa20.1■□□□□ 0.81
HDAC6-225ENST00000483506 PPP1R16BQ96T49 567 aa20.1■□□□□ 0.81
HDAC6-225ENST00000483506 RAB34Q9BZG1 259 aa20.1■□□□□ 0.81
HDAC6-225ENST00000483506 SUCLA2Q9P2R7 463 aaPredicted RBP20.1■□□□□ 0.81
HDAC6-225ENST00000483506 DBR1Q9UK59 544 aaKnown RBP20.1■□□□□ 0.81
HDAC6-225ENST00000483506 VPS37CA5D8V6 355 aaPredicted RBP20.09■□□□□ 0.81
HDAC6-225ENST00000483506 DARSP14868 501 aaKnown RBP20.09■□□□□ 0.81
HDAC6-225ENST00000483506 RARRES1P49788 294 aa20.09■□□□□ 0.81
HDAC6-225ENST00000483506 EMC2Q15006 297 aa20.09■□□□□ 0.81
HDAC6-225ENST00000483506 PPP2R2DQ66LE6 453 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms