RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 EVPLQ92817 2033 aa19.86■□□□□ 0.77
CPNE1-224ENST00000483359 TRIM43BA6NCK2 446 aa19.85■□□□□ 0.77
CPNE1-224ENST00000483359 MAFO75444 373 aaPredicted RBP19.85■□□□□ 0.77
CPNE1-224ENST00000483359 PLA2G4BP0C869 781 aa19.85■□□□□ 0.77
CPNE1-224ENST00000483359 XRCC6P12956 609 aaKnown RBP eCLIP19.85■□□□□ 0.77
CPNE1-224ENST00000483359 CMA1P23946 247 aa19.85■□□□□ 0.77
CPNE1-224ENST00000483359 MCM6Q14566 821 aa19.85■□□□□ 0.77
CPNE1-224ENST00000483359 CSPP1Q1MSJ5 1256 aa19.85■□□□□ 0.77
CPNE1-224ENST00000483359 NAALADL2Q58DX5 795 aa19.85■□□□□ 0.77
CPNE1-224ENST00000483359 TAF2Q6P1X5 1199 aa19.85■□□□□ 0.77
CPNE1-224ENST00000483359 CCDC73Q6ZRK6 1079 aa19.85■□□□□ 0.77
CPNE1-224ENST00000483359 RETREG2Q8NC44 543 aa19.85■□□□□ 0.77
CPNE1-224ENST00000483359 LARP4BQ92615 738 aaKnown RBP19.85■□□□□ 0.77
CPNE1-224ENST00000483359 RAD54LQ92698 747 aa19.85■□□□□ 0.77
CPNE1-224ENST00000483359 TRIM43Q96BQ3 446 aaPredicted RBP19.85■□□□□ 0.77
CPNE1-224ENST00000483359 HIPK3Q9H422 1215 aa19.85■□□□□ 0.77
CPNE1-224ENST00000483359 GOLPH3LQ9H4A5 285 aa19.85■□□□□ 0.77
CPNE1-224ENST00000483359 TBX21Q9UL17 535 aa19.85■□□□□ 0.77
CPNE1-224ENST00000483359 ZMYND8Q9ULU4 1186 aaPredicted RBP19.85■□□□□ 0.77
CPNE1-224ENST00000483359 LOXHD1Q8IVV2 1947 aa19.85■□□□□ 0.77
CPNE1-224ENST00000483359 MAGEB2O15479 319 aa19.84■□□□□ 0.77
CPNE1-224ENST00000483359 POLR2DO15514 142 aaKnown RBP19.84■□□□□ 0.77
CPNE1-224ENST00000483359 SLC26A4O43511 780 aa19.84■□□□□ 0.77
CPNE1-224ENST00000483359 GADD45BO75293 160 aaPredicted RBP19.84■□□□□ 0.77
CPNE1-224ENST00000483359 RAD51AP2Q09MP3 1159 aa19.84■□□□□ 0.77
CPNE1-224ENST00000483359 MRPS27Q92552 414 aaKnown RBP19.84■□□□□ 0.77
CPNE1-224ENST00000483359 TMEM143Q96AN5 459 aa19.84■□□□□ 0.77
CPNE1-224ENST00000483359 ZNF668Q96K58 619 aaPredicted RBP19.84■□□□□ 0.77
CPNE1-224ENST00000483359 MTRQ99707 1265 aa19.84■□□□□ 0.77
CPNE1-224ENST00000483359 DHX33Q9H6R0 707 aaKnown RBP19.84■□□□□ 0.77
CPNE1-224ENST00000483359 ATP6V0A4Q9HBG4 840 aa19.84■□□□□ 0.77
CPNE1-224ENST00000483359 POLD4Q9HCU8 107 aa19.84■□□□□ 0.77
CPNE1-224ENST00000483359 XPNPEP1Q9NQW7 623 aa19.84■□□□□ 0.77
CPNE1-224ENST00000483359 PRKAG2Q9UGJ0 569 aa19.84■□□□□ 0.77
CPNE1-224ENST00000483359 KCNH3Q9ULD8 1083 aa19.84■□□□□ 0.77
CPNE1-224ENST00000483359 AKT3Q9Y243 479 aa19.84■□□□□ 0.77
CPNE1-224ENST00000483359 DGAT1O75907 488 aa19.84■□□□□ 0.77
CPNE1-224ENST00000483359 VTNP04004 478 aa19.84■□□□□ 0.77
CPNE1-224ENST00000483359 RFC5P40937 340 aa19.84■□□□□ 0.77
CPNE1-224ENST00000483359 NDUFA8P51970 172 aa19.84■□□□□ 0.77
CPNE1-224ENST00000483359 RUSC1Q9BVN2 902 aa19.84■□□□□ 0.77
CPNE1-224ENST00000483359 GPRC5CQ9NQ84 441 aa19.84■□□□□ 0.77
CPNE1-224ENST00000483359 GINS2Q9Y248 185 aa19.84■□□□□ 0.77
CPNE1-224ENST00000483359 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.83■□□□□ 0.77
CPNE1-224ENST00000483359 SMIM35A0A1B0GVV1 85 aa19.83■□□□□ 0.77
CPNE1-224ENST00000483359 A0A1W2PQ27 194 aa19.83■□□□□ 0.77
CPNE1-224ENST00000483359 A0A1W2PQ64 194 aa19.83■□□□□ 0.77
CPNE1-224ENST00000483359 A0A1W2PQD8 194 aa19.83■□□□□ 0.77
CPNE1-224ENST00000483359 PRPF40AO75400 957 aaKnown RBP19.83■□□□□ 0.77
CPNE1-224ENST00000483359 ITGB8P26012 769 aa19.83■□□□□ 0.77
CPNE1-224ENST00000483359 TMOD1P28289 359 aa19.83■□□□□ 0.77
CPNE1-224ENST00000483359 SLC12A3P55017 1021 aa19.83■□□□□ 0.77
CPNE1-224ENST00000483359 MKRN4PQ13434 485 aaPredicted RBP19.83■□□□□ 0.77
CPNE1-224ENST00000483359 KIAA0319LQ8IZA0 1049 aa19.83■□□□□ 0.77
CPNE1-224ENST00000483359 GBP4Q96PP9 640 aa19.83■□□□□ 0.77
CPNE1-224ENST00000483359 NOC4LQ9BVI4 516 aaKnown RBP19.83■□□□□ 0.77
CPNE1-224ENST00000483359 IGKV6-21A0A0C4DH24 114 aa19.83■□□□□ 0.76
CPNE1-224ENST00000483359 CKBP12277 381 aa19.83■□□□□ 0.76
CPNE1-224ENST00000483359 CYP2C18P33260 490 aa19.83■□□□□ 0.76
CPNE1-224ENST00000483359 RGS19P49795 217 aa19.83■□□□□ 0.76
CPNE1-224ENST00000483359 CCL23P55773 120 aa19.83■□□□□ 0.76
CPNE1-224ENST00000483359 CACNB1Q02641 598 aaPredicted RBP19.83■□□□□ 0.76
CPNE1-224ENST00000483359 TRIM71Q2Q1W2 868 aaKnown RBP19.83■□□□□ 0.76
CPNE1-224ENST00000483359 LINC01465Q8N7H1 131 aa19.83■□□□□ 0.76
CPNE1-224ENST00000483359 SYT2Q8N9I0 419 aaPredicted RBP19.83■□□□□ 0.76
CPNE1-224ENST00000483359 STAMQ92783 540 aa19.83■□□□□ 0.76
CPNE1-224ENST00000483359 MAP7D2Q96T17 732 aa19.83■□□□□ 0.76
CPNE1-224ENST00000483359 STK17AQ9UEE5 414 aa19.83■□□□□ 0.76
CPNE1-224ENST00000483359 PPME1Q9Y570 386 aa19.83■□□□□ 0.76
CPNE1-224ENST00000483359 RAG1P15918 1043 aa19.82■□□□□ 0.76
CPNE1-224ENST00000483359 E2F4Q16254 413 aa19.82■□□□□ 0.76
CPNE1-224ENST00000483359 ZNF618Q5T7W0 954 aa19.82■□□□□ 0.76
CPNE1-224ENST00000483359 FAM102BQ5T8I3 360 aa19.82■□□□□ 0.76
CPNE1-224ENST00000483359 RINT1Q6NUQ1 792 aa19.82■□□□□ 0.76
CPNE1-224ENST00000483359 RSPH3Q86UC2 560 aa19.82■□□□□ 0.76
CPNE1-224ENST00000483359 GPBP1Q86WP2 473 aa19.82■□□□□ 0.76
CPNE1-224ENST00000483359 CCDC155Q8N6L0 562 aa19.82■□□□□ 0.76
CPNE1-224ENST00000483359 TMEM87AQ8NBN3 555 aa19.82■□□□□ 0.76
CPNE1-224ENST00000483359 CAGE1Q8TC20 777 aa19.82■□□□□ 0.76
CPNE1-224ENST00000483359 JPH2Q9BR39 696 aaPredicted RBP19.82■□□□□ 0.76
CPNE1-224ENST00000483359 HPSEQ9Y251 543 aa19.82■□□□□ 0.76
CPNE1-224ENST00000483359 NPHP3-ACAD11A0A0J9YXS1 232 aa19.81■□□□□ 0.76
CPNE1-224ENST00000483359 BFSP2Q13515 415 aa19.81■□□□□ 0.76
CPNE1-224ENST00000483359 CLEC17AQ6ZS10 378 aa19.81■□□□□ 0.76
CPNE1-224ENST00000483359 RHPN2Q8IUC4 686 aa19.81■□□□□ 0.76
CPNE1-224ENST00000483359 KSR1Q8IVT5 923 aa19.81■□□□□ 0.76
CPNE1-224ENST00000483359 KCTD17Q8N5Z5 321 aa19.81■□□□□ 0.76
CPNE1-224ENST00000483359 IQUBQ8NA54 791 aa19.81■□□□□ 0.76
CPNE1-224ENST00000483359 SCLYQ96I15 445 aa19.81■□□□□ 0.76
CPNE1-224ENST00000483359 SUCLA2Q9P2R7 463 aaPredicted RBP19.81■□□□□ 0.76
CPNE1-224ENST00000483359 TANC1Q9C0D5 1861 aa19.81■□□□□ 0.76
CPNE1-224ENST00000483359 KIAA0355O15063 1070 aa19.81■□□□□ 0.76
CPNE1-224ENST00000483359 SYKP43405 635 aa19.81■□□□□ 0.76
CPNE1-224ENST00000483359 DNM2P50570 870 aa19.81■□□□□ 0.76
CPNE1-224ENST00000483359 KIZQ2M2Z5 673 aa19.81■□□□□ 0.76
CPNE1-224ENST00000483359 POLR3FQ9H1D9 316 aaPredicted RBP19.81■□□□□ 0.76
CPNE1-224ENST00000483359 WNT8AQ9H1J5 351 aa19.81■□□□□ 0.76
CPNE1-224ENST00000483359 CYP11B2P19099 503 aa19.8■□□□□ 0.76
CPNE1-224ENST00000483359 LRRC8DQ7L1W4 858 aa19.8■□□□□ 0.76
CPNE1-224ENST00000483359 EXOC8Q8IYI6 725 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms