RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 CGREF1Q99674 301 aa8.45□□□□□ -1.06
COL4A5-205ENST00000483338 EURLQ9NYK6 297 aa8.45□□□□□ -1.06
COL4A5-205ENST00000483338 PRKAG3Q9UGI9 489 aa8.45□□□□□ -1.06
COL4A5-205ENST00000483338 CAPN11Q9UMQ6 739 aa8.45□□□□□ -1.06
COL4A5-205ENST00000483338 MST1RQ04912 1400 aa8.45□□□□□ -1.06
COL4A5-205ENST00000483338 PDE5AO76074 875 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 POTEIP0CG38 1075 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 EPHB2P29323 1055 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 GRIA2P42262 883 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 CCDC6Q16204 474 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 LRRC74BQ6ZQY2 392 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 KRT27Q7Z3Y8 459 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 AGGF1Q8N302 714 aaeCLIP8.44□□□□□ -1.06
COL4A5-205ENST00000483338 KCNH5Q8NCM2 988 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 DDX12PQ92771 950 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 GPATCH3Q96I76 525 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 DDX43Q9NXZ2 648 aaKnown RBP8.44□□□□□ -1.06
COL4A5-205ENST00000483338 PTTG2Q9NZH5 202 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 SALL4Q9UJQ4 1053 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 ANGEL1Q9UNK9 670 aaKnown RBP8.44□□□□□ -1.06
COL4A5-205ENST00000483338 TTLL3Q9Y4R7 772 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 POTEFA5A3E0 1075 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 H7C1D1 291 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 STK10O94804 968 aaKnown RBP8.44□□□□□ -1.06
COL4A5-205ENST00000483338 CASP1P29466 404 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 RELAQ04206 551 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 DCTN2Q13561 401 aaKnown RBP8.44□□□□□ -1.06
COL4A5-205ENST00000483338 MTMR3Q13615 1198 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 LRP8Q14114 963 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 CCDC153Q494R4 210 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 ZCWPW2Q504Y3 356 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 FAM209AQ5JX71 171 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 BPHLQ86WA6 291 aaPredicted RBP8.44□□□□□ -1.06
COL4A5-205ENST00000483338 EIF1ADQ8N9N8 165 aaKnown RBP8.44□□□□□ -1.06
COL4A5-205ENST00000483338 NAP1L3Q99457 506 aaPredicted RBP8.44□□□□□ -1.06
COL4A5-205ENST00000483338 LBHD1Q9BQE6 289 aaPredicted RBP8.44□□□□□ -1.06
COL4A5-205ENST00000483338 TBC1D10AQ9BXI6 508 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 GBA3Q9H227 469 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 NRDE2Q9H7Z3 1164 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 AGPAT5Q9NUQ2 364 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 DDX18Q9NVP1 670 aaKnown RBP8.44□□□□□ -1.06
COL4A5-205ENST00000483338 NOX1Q9Y5S8 564 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 FBP2O00757 339 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 SHROOM1Q2M3G4 852 aaPredicted RBP8.44□□□□□ -1.06
COL4A5-205ENST00000483338 CCDC152Q4G0S7 254 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 VWA3BQ502W6 1294 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 TCP11X2Q5H9J9 407 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 TMC3Q7Z5M5 1100 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 SATL1Q86VE3 508 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 SCAIQ8N9R8 606 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 LSM14AQ8ND56 463 aaKnown RBP8.44□□□□□ -1.06
COL4A5-205ENST00000483338 MAELQ96JY0 434 aaKnown RBP8.44□□□□□ -1.06
COL4A5-205ENST00000483338 PPP1R10Q96QC0 940 aaKnown RBP8.44□□□□□ -1.06
COL4A5-205ENST00000483338 ZNF184Q99676 751 aaPredicted RBP8.44□□□□□ -1.06
COL4A5-205ENST00000483338 CCT7Q99832 543 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 PSTPIP2Q9H939 334 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 KRT82Q9NSB4 513 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 TXLNGQ9NUQ3 528 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 CTNND2Q9UQB3 1225 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.44□□□□□ -1.06
COL4A5-205ENST00000483338 PASKQ96RG2 1323 aa8.44□□□□□ -1.06
COL4A5-205ENST00000483338 ADAM23O75077 832 aa8.43□□□□□ -1.06
COL4A5-205ENST00000483338 GTF2H1P32780 548 aa8.43□□□□□ -1.06
COL4A5-205ENST00000483338 RNASE9P60153 205 aaKnown RBP8.43□□□□□ -1.06
COL4A5-205ENST00000483338 LMNB2Q03252 620 aa8.43□□□□□ -1.06
COL4A5-205ENST00000483338 CUL1Q13616 776 aa8.43□□□□□ -1.06
COL4A5-205ENST00000483338 WASHC4Q2M389 1173 aa8.43□□□□□ -1.06
COL4A5-205ENST00000483338 KLHDC7AQ5VTJ3 777 aa8.43□□□□□ -1.06
COL4A5-205ENST00000483338 CAPN12Q6ZSI9 719 aa8.43□□□□□ -1.06
COL4A5-205ENST00000483338 VPS37DQ86XT2 251 aa8.43□□□□□ -1.06
COL4A5-205ENST00000483338 KLHL7Q8IXQ5 586 aa8.43□□□□□ -1.06
COL4A5-205ENST00000483338 RIN3Q8TB24 985 aa8.43□□□□□ -1.06
COL4A5-205ENST00000483338 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.43□□□□□ -1.06
COL4A5-205ENST00000483338 MRPL46Q9H2W6 279 aaKnown RBP8.43□□□□□ -1.06
COL4A5-205ENST00000483338 HAO1Q9UJM8 370 aa8.43□□□□□ -1.06
COL4A5-205ENST00000483338 CCPG1Q9ULG6 757 aa8.43□□□□□ -1.06
COL4A5-205ENST00000483338 CARD8Q9Y2G2 431 aa8.43□□□□□ -1.06
COL4A5-205ENST00000483338 MAP3K15Q6ZN16 1313 aa8.43□□□□□ -1.06
COL4A5-205ENST00000483338 TCP11X1B4DZS4 312 aa8.43□□□□□ -1.06
COL4A5-205ENST00000483338 LMNAP02545 664 aaKnown RBP8.43□□□□□ -1.06
COL4A5-205ENST00000483338 TARSP26639 723 aaKnown RBP8.43□□□□□ -1.06
COL4A5-205ENST00000483338 IFI35P80217 286 aaPredicted RBP8.43□□□□□ -1.06
COL4A5-205ENST00000483338 EDC4Q6P2E9 1401 aaKnown RBP8.43□□□□□ -1.06
COL4A5-205ENST00000483338 Q6ZNX1 250 aa8.43□□□□□ -1.06
COL4A5-205ENST00000483338 AACSQ86V21 672 aa8.43□□□□□ -1.06
COL4A5-205ENST00000483338 HPS3Q969F9 1004 aa8.43□□□□□ -1.06
COL4A5-205ENST00000483338 HEPHQ9BQS7 1158 aa8.43□□□□□ -1.06
COL4A5-205ENST00000483338 BOLA2Q9H3K6 86 aa8.43□□□□□ -1.06
COL4A5-205ENST00000483338 TRPC7Q9HCX4 862 aa8.43□□□□□ -1.06
COL4A5-205ENST00000483338 IL1RAPL1Q9NZN1 696 aa8.43□□□□□ -1.06
COL4A5-205ENST00000483338 ARHGEF28Q8N1W1 1705 aaKnown RBP8.43□□□□□ -1.06
COL4A5-205ENST00000483338 TESPA1A2RU30 521 aaPredicted RBP8.43□□□□□ -1.06
COL4A5-205ENST00000483338 KCNJ18B7U540 433 aa8.43□□□□□ -1.06
COL4A5-205ENST00000483338 LCA5LO95447 670 aa8.43□□□□□ -1.06
COL4A5-205ENST00000483338 PLEKP08567 350 aaPredicted RBP8.43□□□□□ -1.06
COL4A5-205ENST00000483338 DNA2P51530 1060 aa8.43□□□□□ -1.06
COL4A5-205ENST00000483338 AP1B1Q10567 949 aa8.43□□□□□ -1.06
COL4A5-205ENST00000483338 KCNJ12Q14500 433 aa8.43□□□□□ -1.06
COL4A5-205ENST00000483338 RFWD3Q6PCD5 774 aa8.43□□□□□ -1.06
COL4A5-205ENST00000483338 ECHDC2Q86YB7 292 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms