RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.8□□□□□ -0.84
SNX4-205ENST00000482965 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.8□□□□□ -0.84
SNX4-205ENST00000482965 SOX1O00570 391 aaPredicted RBP9.8□□□□□ -0.84
SNX4-205ENST00000482965 EFCAB14O75071 495 aa9.8□□□□□ -0.84
SNX4-205ENST00000482965 MED24O75448 989 aa9.8□□□□□ -0.84
SNX4-205ENST00000482965 LYPLA2O95372 231 aa9.8□□□□□ -0.84
SNX4-205ENST00000482965 VTNP04004 478 aa9.8□□□□□ -0.84
SNX4-205ENST00000482965 PDIA4P13667 645 aaKnown RBP9.8□□□□□ -0.84
SNX4-205ENST00000482965 CCT6AP40227 531 aaKnown RBP9.8□□□□□ -0.84
SNX4-205ENST00000482965 RFC5P40937 340 aa9.8□□□□□ -0.84
SNX4-205ENST00000482965 KCNJ6P48051 423 aa9.8□□□□□ -0.84
SNX4-205ENST00000482965 DNM2P50570 870 aa9.8□□□□□ -0.84
SNX4-205ENST00000482965 FXR1P51114 621 aaKnown RBP eCLIP9.8□□□□□ -0.84
SNX4-205ENST00000482965 POLGP54098 1239 aaPredicted RBP9.8□□□□□ -0.84
SNX4-205ENST00000482965 IKBKEQ14164 716 aa9.8□□□□□ -0.84
SNX4-205ENST00000482965 PDIA5Q14554 519 aa9.8□□□□□ -0.84
SNX4-205ENST00000482965 LPIN1Q14693 890 aa9.8□□□□□ -0.84
SNX4-205ENST00000482965 PLEKHG4Q58EX7 1191 aa9.8□□□□□ -0.84
SNX4-205ENST00000482965 FBXO47Q5MNV8 452 aa9.8□□□□□ -0.84
SNX4-205ENST00000482965 TSHZ1Q6ZSZ6 1077 aa9.8□□□□□ -0.84
SNX4-205ENST00000482965 EXOC8Q8IYI6 725 aa9.8□□□□□ -0.84
SNX4-205ENST00000482965 LINC01465Q8N7H1 131 aa9.8□□□□□ -0.84
SNX4-205ENST00000482965 SNX29Q8TEQ0 813 aa9.8□□□□□ -0.84
SNX4-205ENST00000482965 SLC7A3Q8WY07 619 aa9.8□□□□□ -0.84
SNX4-205ENST00000482965 LRCH3Q96II8 777 aa9.8□□□□□ -0.84
SNX4-205ENST00000482965 SCLT1Q96NL6 688 aa9.8□□□□□ -0.84
SNX4-205ENST00000482965 CEP89Q96ST8 783 aa9.8□□□□□ -0.84
SNX4-205ENST00000482965 POLR3CQ9BUI4 534 aaPredicted RBP9.8□□□□□ -0.84
SNX4-205ENST00000482965 IFIH1Q9BYX4 1025 aaKnown RBP9.8□□□□□ -0.84
SNX4-205ENST00000482965 OSBPL7Q9BZF2 842 aa9.8□□□□□ -0.84
SNX4-205ENST00000482965 ZSCAN16Q9H4T2 348 aaPredicted RBP9.8□□□□□ -0.84
SNX4-205ENST00000482965 ANKEF1Q9NU02 776 aa9.8□□□□□ -0.84
SNX4-205ENST00000482965 STK24Q9Y6E0 443 aa9.8□□□□□ -0.84
SNX4-205ENST00000482965 KDM3AQ9Y4C1 1321 aa9.8□□□□□ -0.84
SNX4-205ENST00000482965 ABHD14A-ACY1A0A1B0GW23 586 aa9.79□□□□□ -0.84
SNX4-205ENST00000482965 VWA3AA6NCI4 1184 aa9.79□□□□□ -0.84
SNX4-205ENST00000482965 RBAK-RBAKDNI3L0D1 243 aa9.79□□□□□ -0.84
SNX4-205ENST00000482965 ZBTB39O15060 712 aa9.79□□□□□ -0.84
SNX4-205ENST00000482965 MAFO75444 373 aaPredicted RBP9.79□□□□□ -0.84
SNX4-205ENST00000482965 SPATA31C1P0DKV0 1188 aa9.79□□□□□ -0.84
SNX4-205ENST00000482965 ATP2A2P16615 1042 aaKnown RBP9.79□□□□□ -0.84
SNX4-205ENST00000482965 RPA1P27694 616 aa9.79□□□□□ -0.84
SNX4-205ENST00000482965 NLRP11P59045 1033 aaKnown RBP9.79□□□□□ -0.84
SNX4-205ENST00000482965 SMAD3P84022 425 aaKnown RBP9.79□□□□□ -0.84
SNX4-205ENST00000482965 SF3A1Q15459 793 aaKnown RBP9.79□□□□□ -0.84
SNX4-205ENST00000482965 IL17AQ16552 155 aa9.79□□□□□ -0.84
SNX4-205ENST00000482965 KIZQ2M2Z5 673 aa9.79□□□□□ -0.84
SNX4-205ENST00000482965 TCTN1Q2MV58 587 aa9.79□□□□□ -0.84
SNX4-205ENST00000482965 FOXD4L5Q5VV16 416 aaPredicted RBP9.79□□□□□ -0.84
SNX4-205ENST00000482965 KRT79Q5XKE5 535 aa9.79□□□□□ -0.84
SNX4-205ENST00000482965 ARL6IP4Q66PJ3 421 aaKnown RBP9.79□□□□□ -0.84
SNX4-205ENST00000482965 FAM173BQ6P4H8 233 aa9.79□□□□□ -0.84
SNX4-205ENST00000482965 POTEGQ6S5H5 508 aa9.79□□□□□ -0.84
SNX4-205ENST00000482965 CATSPER3Q86XQ3 398 aa9.79□□□□□ -0.84
SNX4-205ENST00000482965 IGSF22Q8N9C0 903 aa9.79□□□□□ -0.84
SNX4-205ENST00000482965 ZNF579Q8NAF0 562 aaKnown RBP9.79□□□□□ -0.84
SNX4-205ENST00000482965 USP38Q8NB14 1042 aa9.79□□□□□ -0.84
SNX4-205ENST00000482965 PIGOQ8TEQ8 1089 aa9.79□□□□□ -0.84
SNX4-205ENST00000482965 FOXD4L4Q8WXT5 416 aaPredicted RBP9.79□□□□□ -0.84
SNX4-205ENST00000482965 APBB2Q92870 758 aa9.79□□□□□ -0.84
SNX4-205ENST00000482965 NACC1Q96RE7 527 aa9.79□□□□□ -0.84
SNX4-205ENST00000482965 SLC9A7Q96T83 725 aa9.79□□□□□ -0.84
SNX4-205ENST00000482965 OSMRQ99650 979 aa9.79□□□□□ -0.84
SNX4-205ENST00000482965 BMP2KQ9NSY1 1161 aaPredicted RBP9.79□□□□□ -0.84
SNX4-205ENST00000482965 SQORQ9Y6N5 450 aa9.79□□□□□ -0.84
SNX4-205ENST00000482965 A0A087WWV3 80 aa9.78□□□□□ -0.84
SNX4-205ENST00000482965 IGKV6-21A0A0C4DH24 114 aa9.78□□□□□ -0.84
SNX4-205ENST00000482965 PP2D1A8MPX8 630 aa9.78□□□□□ -0.84
SNX4-205ENST00000482965 GRXCR1A8MXD5 290 aa9.78□□□□□ -0.84
SNX4-205ENST00000482965 GAS2O43903 313 aaKnown RBP9.78□□□□□ -0.84
SNX4-205ENST00000482965 GPR32O75388 356 aa9.78□□□□□ -0.84
SNX4-205ENST00000482965 RPS6KA5O75582 802 aa9.78□□□□□ -0.84
SNX4-205ENST00000482965 ZSCAN22P10073 491 aaPredicted RBP9.78□□□□□ -0.84
SNX4-205ENST00000482965 XRCC6P12956 609 aaKnown RBP eCLIP9.78□□□□□ -0.84
SNX4-205ENST00000482965 MUTP22033 750 aa9.78□□□□□ -0.84
SNX4-205ENST00000482965 CD52P31358 61 aa9.78□□□□□ -0.84
SNX4-205ENST00000482965 RARRES1P49788 294 aa9.78□□□□□ -0.84
SNX4-205ENST00000482965 CRYBB1P53674 252 aaPredicted RBP9.78□□□□□ -0.84
SNX4-205ENST00000482965 WDR5P61964 334 aaKnown RBP9.78□□□□□ -0.84
SNX4-205ENST00000482965 CEBPZQ03701 1054 aaKnown RBP9.78□□□□□ -0.84
SNX4-205ENST00000482965 PAK2Q13177 524 aa9.78□□□□□ -0.84
SNX4-205ENST00000482965 DRP2Q13474 957 aa9.78□□□□□ -0.84
SNX4-205ENST00000482965 EMC2Q15006 297 aa9.78□□□□□ -0.84
SNX4-205ENST00000482965 ODR4Q5SWX8 454 aa9.78□□□□□ -0.84
SNX4-205ENST00000482965 FAM109BQ6ICB4 259 aaPredicted RBP9.78□□□□□ -0.84
SNX4-205ENST00000482965 ZNF710Q8N1W2 664 aa9.78□□□□□ -0.84
SNX4-205ENST00000482965 TCP11Q8WWU5 503 aa9.78□□□□□ -0.84
SNX4-205ENST00000482965 NLRP7Q8WX94 980 aa9.78□□□□□ -0.84
SNX4-205ENST00000482965 ZNF668Q96K58 619 aaPredicted RBP9.78□□□□□ -0.84
SNX4-205ENST00000482965 MTRQ99707 1265 aa9.78□□□□□ -0.84
SNX4-205ENST00000482965 TSPYL2Q9H2G4 693 aaPredicted RBP9.78□□□□□ -0.84
SNX4-205ENST00000482965 DHX33Q9H6R0 707 aaKnown RBP9.78□□□□□ -0.84
SNX4-205ENST00000482965 AGO3Q9H9G7 860 aaKnown RBP9.78□□□□□ -0.84
SNX4-205ENST00000482965 CDHR5Q9HBB8 845 aa9.78□□□□□ -0.84
SNX4-205ENST00000482965 SUCLA2Q9P2R7 463 aaPredicted RBP9.78□□□□□ -0.84
SNX4-205ENST00000482965 CLIC4Q9Y696 253 aa9.78□□□□□ -0.84
SNX4-205ENST00000482965 TTC3P53804 2025 aa9.77□□□□□ -0.85
SNX4-205ENST00000482965 ARHGEF35A5YM69 484 aa9.77□□□□□ -0.85
SNX4-205ENST00000482965 HAX1O00165 279 aa9.77□□□□□ -0.85
SNX4-205ENST00000482965 USO1O60763 962 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms