RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 JMJD7P0C870 316 aa5.35□□□□□ -1.55
GTF3A-207ENST00000482655 ZBTB48P10074 688 aaPredicted RBP5.35□□□□□ -1.55
GTF3A-207ENST00000482655 FNTBP49356 437 aa5.35□□□□□ -1.55
GTF3A-207ENST00000482655 MRE11P49959 708 aa5.35□□□□□ -1.55
GTF3A-207ENST00000482655 MECP2P51608 486 aaKnown RBP5.35□□□□□ -1.55
GTF3A-207ENST00000482655 ALDH6A1Q02252 535 aaKnown RBP5.35□□□□□ -1.55
GTF3A-207ENST00000482655 ROM1Q03395 351 aa5.35□□□□□ -1.55
GTF3A-207ENST00000482655 PCOLCEQ15113 449 aa5.35□□□□□ -1.55
GTF3A-207ENST00000482655 TCEA2Q15560 299 aa5.35□□□□□ -1.55
GTF3A-207ENST00000482655 TMEM200BQ69YZ2 307 aa5.35□□□□□ -1.55
GTF3A-207ENST00000482655 USP30Q70CQ3 517 aa5.35□□□□□ -1.55
GTF3A-207ENST00000482655 LARP4Q71RC2 724 aaKnown RBP eCLIP5.35□□□□□ -1.55
GTF3A-207ENST00000482655 Q8TCH9 128 aa5.35□□□□□ -1.55
GTF3A-207ENST00000482655 FOXB1Q99853 325 aa5.35□□□□□ -1.55
GTF3A-207ENST00000482655 DPYSL5Q9BPU6 564 aa5.35□□□□□ -1.55
GTF3A-207ENST00000482655 KANSL2Q9H9L4 492 aa5.35□□□□□ -1.55
GTF3A-207ENST00000482655 ACSS2Q9NR19 701 aa5.35□□□□□ -1.55
GTF3A-207ENST00000482655 MAGEC2Q9UBF1 373 aaPredicted RBP5.35□□□□□ -1.55
GTF3A-207ENST00000482655 FOXS1O43638 330 aa5.34□□□□□ -1.55
GTF3A-207ENST00000482655 CYP17A1P05093 508 aa5.34□□□□□ -1.55
GTF3A-207ENST00000482655 TNFRSF1AP19438 455 aa5.34□□□□□ -1.55
GTF3A-207ENST00000482655 STAT5BP51692 787 aa5.34□□□□□ -1.55
GTF3A-207ENST00000482655 PABPC4Q13310 644 aaKnown RBP eCLIP5.34□□□□□ -1.553e-8■■■■□ 24.1
GTF3A-207ENST00000482655 NFYCQ13952 458 aa5.34□□□□□ -1.55
GTF3A-207ENST00000482655 NOLC1Q14978 699 aaKnown RBP eCLIP5.34□□□□□ -1.55
GTF3A-207ENST00000482655 CFAP100Q494V2 611 aa5.34□□□□□ -1.55
GTF3A-207ENST00000482655 TRIM68Q6AZZ1 485 aa5.34□□□□□ -1.55
GTF3A-207ENST00000482655 HOMER1Q86YM7 354 aa5.34□□□□□ -1.55
GTF3A-207ENST00000482655 OR14A2Q96R54 314 aa5.34□□□□□ -1.55
GTF3A-207ENST00000482655 MSL2Q9HCI7 577 aa5.34□□□□□ -1.55
GTF3A-207ENST00000482655 TMA7Q9Y2S6 64 aaKnown RBP5.34□□□□□ -1.55
GTF3A-207ENST00000482655 UBA6A0AVT1 1052 aaPredicted RBP5.33□□□□□ -1.56
GTF3A-207ENST00000482655 MATN3O15232 486 aa5.33□□□□□ -1.56
GTF3A-207ENST00000482655 RFPL3O75679 317 aa5.33□□□□□ -1.56
GTF3A-207ENST00000482655 RAD17O75943 681 aa5.33□□□□□ -1.56
GTF3A-207ENST00000482655 COMTP21964 271 aa5.33□□□□□ -1.56
GTF3A-207ENST00000482655 RPS19P39019 145 aaKnown RBP5.33□□□□□ -1.56
GTF3A-207ENST00000482655 SLC6A3Q01959 620 aa5.33□□□□□ -1.56
GTF3A-207ENST00000482655 PRKD1Q15139 912 aaPredicted RBP5.33□□□□□ -1.56
GTF3A-207ENST00000482655 SLFN12LQ6IEE8 588 aa5.33□□□□□ -1.56
GTF3A-207ENST00000482655 RTN4RL1Q86UN2 441 aaPredicted RBP5.33□□□□□ -1.56
GTF3A-207ENST00000482655 NME9Q86XW9 330 aa5.33□□□□□ -1.56
GTF3A-207ENST00000482655 FUKQ8N0W3 1084 aa5.33□□□□□ -1.56
GTF3A-207ENST00000482655 KIAA1958Q8N8K9 716 aa5.33□□□□□ -1.56
GTF3A-207ENST00000482655 OR14K1Q8NGZ2 314 aa5.33□□□□□ -1.56
GTF3A-207ENST00000482655 APPBP2Q92624 585 aa5.33□□□□□ -1.56
GTF3A-207ENST00000482655 ADOQ96SZ5 270 aa5.33□□□□□ -1.56
GTF3A-207ENST00000482655 INTS7Q9NVH2 962 aaKnown RBP5.33□□□□□ -1.56
GTF3A-207ENST00000482655 ZKSCAN5Q9Y2L8 839 aa5.33□□□□□ -1.56
GTF3A-207ENST00000482655 SMARCA2P51531 1590 aa5.33□□□□□ -1.56
GTF3A-207ENST00000482655 CBX4O00257 560 aa5.32□□□□□ -1.56
GTF3A-207ENST00000482655 TRAF5O00463 557 aa5.32□□□□□ -1.56
GTF3A-207ENST00000482655 MAFO75444 373 aaPredicted RBP5.32□□□□□ -1.56
GTF3A-207ENST00000482655 PRLP01236 227 aa5.32□□□□□ -1.56
GTF3A-207ENST00000482655 SDSP20132 328 aa5.32□□□□□ -1.56
GTF3A-207ENST00000482655 CDSNQ15517 529 aa5.32□□□□□ -1.56
GTF3A-207ENST00000482655 TBR1Q16650 682 aa5.32□□□□□ -1.56
GTF3A-207ENST00000482655 TTC38Q5R3I4 469 aa5.32□□□□□ -1.56
GTF3A-207ENST00000482655 PRAMEF9Q5VWM5 478 aa5.32□□□□□ -1.56
GTF3A-207ENST00000482655 CDCA2Q69YH5 1023 aaPredicted RBP5.32□□□□□ -1.56
GTF3A-207ENST00000482655 POLNQ7Z5Q5 900 aa5.32□□□□□ -1.56
GTF3A-207ENST00000482655 SPRED1Q7Z699 444 aa5.32□□□□□ -1.56
GTF3A-207ENST00000482655 FAM177A1Q8N128 213 aaPredicted RBP5.32□□□□□ -1.56
GTF3A-207ENST00000482655 FOXRED1Q96CU9 486 aaPredicted RBP5.32□□□□□ -1.56
GTF3A-207ENST00000482655 RNPC3Q96LT9 517 aaKnown RBP5.32□□□□□ -1.56
GTF3A-207ENST00000482655 WWC2-AS2Q96NR7 200 aa5.32□□□□□ -1.56
GTF3A-207ENST00000482655 PLA2G12BQ9BX93 195 aa5.32□□□□□ -1.56
GTF3A-207ENST00000482655 TMPRSS5Q9H3S3 457 aa5.32□□□□□ -1.56
GTF3A-207ENST00000482655 SAE1Q9UBE0 346 aaPredicted RBP5.32□□□□□ -1.56
GTF3A-207ENST00000482655 B4GALT6Q9UBX8 382 aa5.32□□□□□ -1.56
GTF3A-207ENST00000482655 VWA7Q9Y334 891 aa5.32□□□□□ -1.56
GTF3A-207ENST00000482655 GAS7O60861 476 aa5.31□□□□□ -1.56
GTF3A-207ENST00000482655 HMGB1P09429 215 aaKnown RBP5.31□□□□□ -1.56
GTF3A-207ENST00000482655 RGS3P49796 1198 aa5.31□□□□□ -1.56
GTF3A-207ENST00000482655 NEK4P51957 841 aa5.31□□□□□ -1.56
GTF3A-207ENST00000482655 SESN2P58004 480 aaPredicted RBP5.31□□□□□ -1.56
GTF3A-207ENST00000482655 ZXDAP98168 799 aa5.31□□□□□ -1.56
GTF3A-207ENST00000482655 SPDYAQ5MJ70 313 aa5.31□□□□□ -1.56
GTF3A-207ENST00000482655 C16orf86Q6ZW13 317 aa5.31□□□□□ -1.56
GTF3A-207ENST00000482655 OR5AN1Q8NGI8 311 aa5.31□□□□□ -1.56
GTF3A-207ENST00000482655 FAM89AQ96GI7 184 aa5.31□□□□□ -1.56
GTF3A-207ENST00000482655 MAML3Q96JK9 1138 aa5.31□□□□□ -1.56
GTF3A-207ENST00000482655 TUBGCP5Q96RT8 1024 aa5.31□□□□□ -1.56
GTF3A-207ENST00000482655 TESMINQ9Y4I5 508 aa5.31□□□□□ -1.56
GTF3A-207ENST00000482655 CD2APQ9Y5K6 639 aa5.31□□□□□ -1.56
GTF3A-207ENST00000482655 SLC30A1Q9Y6M5 507 aa5.31□□□□□ -1.56
GTF3A-207ENST00000482655 HMGXB3Q12766 1538 aa5.31□□□□□ -1.56
GTF3A-207ENST00000482655 MATN2O00339 956 aa5.3□□□□□ -1.56
GTF3A-207ENST00000482655 DVL2O14641 736 aa5.3□□□□□ -1.56
GTF3A-207ENST00000482655 SLC26A4O43511 780 aa5.3□□□□□ -1.56
GTF3A-207ENST00000482655 KPNA6O60684 536 aa5.3□□□□□ -1.56
GTF3A-207ENST00000482655 H2AFYO75367 372 aaKnown RBP5.3□□□□□ -1.56
GTF3A-207ENST00000482655 HHEXQ03014 270 aa5.3□□□□□ -1.56
GTF3A-207ENST00000482655 ADAM15Q13444 863 aa5.3□□□□□ -1.56
GTF3A-207ENST00000482655 R3HDM1Q15032 1099 aaKnown RBP5.3□□□□□ -1.56
GTF3A-207ENST00000482655 EPHA7Q15375 998 aa5.3□□□□□ -1.56
GTF3A-207ENST00000482655 DGKDQ16760 1214 aa5.3□□□□□ -1.56
GTF3A-207ENST00000482655 KLHDC10Q6PID8 442 aa5.3□□□□□ -1.56
GTF3A-207ENST00000482655 C7orf31Q8N865 590 aa5.3□□□□□ -1.56
GTF3A-207ENST00000482655 CFHR4Q92496 578 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms