RNA–Protein interactions for RNA: ENST00000482582.5

TRAIP-208, Transcript of TRAF interacting protein, humanhuman

TSL 5

Gene TRAIP, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-208ENST00000482582 ANKRD33Q7Z3H0 272 aa13.15□□□□□ -0.3
TRAIP-208ENST00000482582 TMEM87AQ8NBN3 555 aa13.15□□□□□ -0.3
TRAIP-208ENST00000482582 DHX38Q92620 1227 aaKnown RBP13.15□□□□□ -0.3
TRAIP-208ENST00000482582 CALML4Q96GE6 196 aa13.15□□□□□ -0.3
TRAIP-208ENST00000482582 CEP170P1Q96L14 293 aa13.15□□□□□ -0.3
TRAIP-208ENST00000482582 SEMA6BQ9H3T3 888 aa13.15□□□□□ -0.3
TRAIP-208ENST00000482582 CYP26B1Q9NR63 512 aa13.15□□□□□ -0.3
TRAIP-208ENST00000482582 DBR1Q9UK59 544 aaKnown RBP13.15□□□□□ -0.3
TRAIP-208ENST00000482582 COL1A2P08123 1366 aa13.15□□□□□ -0.3
TRAIP-208ENST00000482582 KDM3AQ9Y4C1 1321 aa13.14□□□□□ -0.31
TRAIP-208ENST00000482582 MYH11P35749 1972 aa13.14□□□□□ -0.31
TRAIP-208ENST00000482582 A0A1W2PQ27 194 aa13.14□□□□□ -0.31
TRAIP-208ENST00000482582 A0A1W2PQ64 194 aa13.14□□□□□ -0.31
TRAIP-208ENST00000482582 A0A1W2PQD8 194 aa13.14□□□□□ -0.31
TRAIP-208ENST00000482582 SLC26A4O43511 780 aa13.14□□□□□ -0.31
TRAIP-208ENST00000482582 EYA4O95677 639 aa13.14□□□□□ -0.31
TRAIP-208ENST00000482582 CYP2C9P11712 490 aa13.14□□□□□ -0.31
TRAIP-208ENST00000482582 PFKFB1P16118 471 aa13.14□□□□□ -0.31
TRAIP-208ENST00000482582 FAAP100Q0VG06 881 aa13.14□□□□□ -0.31
TRAIP-208ENST00000482582 MCM6Q14566 821 aa13.14□□□□□ -0.31
TRAIP-208ENST00000482582 E2F4Q16254 413 aa13.14□□□□□ -0.31
TRAIP-208ENST00000482582 OTUD6AQ7L8S5 288 aa13.14□□□□□ -0.31
TRAIP-208ENST00000482582 FSIP1Q8NA03 581 aa13.14□□□□□ -0.31
TRAIP-208ENST00000482582 MYLIPQ8WY64 445 aa13.14□□□□□ -0.31
TRAIP-208ENST00000482582 CDK5RAP3Q96JB5 506 aa13.14□□□□□ -0.31
TRAIP-208ENST00000482582 TOX2Q96NM4 488 aa13.14□□□□□ -0.31
TRAIP-208ENST00000482582 NT5C3AQ9H0P0 336 aa13.14□□□□□ -0.31
TRAIP-208ENST00000482582 BHMT2Q9H2M3 363 aa13.14□□□□□ -0.31
TRAIP-208ENST00000482582 PRDM5Q9NQX1 630 aaPredicted RBP13.14□□□□□ -0.31
TRAIP-208ENST00000482582 PDLIM7Q9NR12 457 aa13.14□□□□□ -0.31
TRAIP-208ENST00000482582 BMP2KQ9NSY1 1161 aaPredicted RBP13.14□□□□□ -0.31
TRAIP-208ENST00000482582 TUBE1Q9UJT0 475 aa13.14□□□□□ -0.31
TRAIP-208ENST00000482582 DNM3Q9UQ16 869 aa13.14□□□□□ -0.31
TRAIP-208ENST00000482582 HPSEQ9Y251 543 aa13.14□□□□□ -0.31
TRAIP-208ENST00000482582 IGKV6-21A0A0C4DH24 114 aa13.13□□□□□ -0.31
TRAIP-208ENST00000482582 FAM237AA0A1B0GTK4 181 aa13.13□□□□□ -0.31
TRAIP-208ENST00000482582 POLR2DO15514 142 aaKnown RBP13.13□□□□□ -0.31
TRAIP-208ENST00000482582 PRPF40AO75400 957 aaKnown RBP13.13□□□□□ -0.31
TRAIP-208ENST00000482582 NDUFA8P51970 172 aa13.13□□□□□ -0.31
TRAIP-208ENST00000482582 MKRN4PQ13434 485 aaPredicted RBP13.13□□□□□ -0.31
TRAIP-208ENST00000482582 DRP2Q13474 957 aa13.13□□□□□ -0.31
TRAIP-208ENST00000482582 TRIM71Q2Q1W2 868 aaKnown RBP13.13□□□□□ -0.31
TRAIP-208ENST00000482582 RRAGBQ5VZM2 374 aa13.13□□□□□ -0.31
TRAIP-208ENST00000482582 SERINC5Q86VE9 423 aa13.13□□□□□ -0.31
TRAIP-208ENST00000482582 LRRC71Q8N4P6 559 aa13.13□□□□□ -0.31
TRAIP-208ENST00000482582 LINC01465Q8N7H1 131 aa13.13□□□□□ -0.31
TRAIP-208ENST00000482582 RASSF8Q8NHQ8 419 aa13.13□□□□□ -0.31
TRAIP-208ENST00000482582 RAD54LQ92698 747 aa13.13□□□□□ -0.31
TRAIP-208ENST00000482582 SEZ6LQ9BYH1 1024 aa13.13□□□□□ -0.31
TRAIP-208ENST00000482582 DHX33Q9H6R0 707 aaKnown RBP13.13□□□□□ -0.31
TRAIP-208ENST00000482582 POLD4Q9HCU8 107 aa13.13□□□□□ -0.31
TRAIP-208ENST00000482582 XPNPEP1Q9NQW7 623 aa13.13□□□□□ -0.31
TRAIP-208ENST00000482582 CCDC39Q9UFE4 941 aa13.13□□□□□ -0.31
TRAIP-208ENST00000482582 KCNH3Q9ULD8 1083 aa13.13□□□□□ -0.31
TRAIP-208ENST00000482582 TET1Q8NFU7 2136 aa13.12□□□□□ -0.31
TRAIP-208ENST00000482582 SCN5AQ14524 2016 aa13.12□□□□□ -0.31
TRAIP-208ENST00000482582 SIP14410 1827 aa13.12□□□□□ -0.31
TRAIP-208ENST00000482582 ARHGEF35A5YM69 484 aa13.12□□□□□ -0.31
TRAIP-208ENST00000482582 DCDC2CA8MYV0 355 aa13.12□□□□□ -0.31
TRAIP-208ENST00000482582 USO1O60763 962 aaKnown RBP13.12□□□□□ -0.31
TRAIP-208ENST00000482582 MAFO75444 373 aaPredicted RBP13.12□□□□□ -0.31
TRAIP-208ENST00000482582 PLA2G4BP0C869 781 aa13.12□□□□□ -0.31
TRAIP-208ENST00000482582 GNAT1P11488 350 aa13.12□□□□□ -0.31
TRAIP-208ENST00000482582 TXLNAP40222 546 aa13.12□□□□□ -0.31
TRAIP-208ENST00000482582 CLCN3P51790 818 aa13.12□□□□□ -0.31
TRAIP-208ENST00000482582 SLC12A3P55017 1021 aa13.12□□□□□ -0.31
TRAIP-208ENST00000482582 TBC1D8BQ0IIM8 1120 aa13.12□□□□□ -0.31
TRAIP-208ENST00000482582 DHX8Q14562 1220 aaKnown RBP13.12□□□□□ -0.31
TRAIP-208ENST00000482582 ARSHQ5FYA8 562 aa13.12□□□□□ -0.31
TRAIP-208ENST00000482582 FAM109BQ6ICB4 259 aaPredicted RBP13.12□□□□□ -0.31
TRAIP-208ENST00000482582 EFCAB12Q6NXP0 572 aa13.12□□□□□ -0.31
TRAIP-208ENST00000482582 PADI6Q6TGC4 694 aa13.12□□□□□ -0.31
TRAIP-208ENST00000482582 KIAA0319LQ8IZA0 1049 aa13.12□□□□□ -0.31
TRAIP-208ENST00000482582 SYT2Q8N9I0 419 aaPredicted RBP13.12□□□□□ -0.31
TRAIP-208ENST00000482582 MRPS27Q92552 414 aaKnown RBP13.12□□□□□ -0.31
TRAIP-208ENST00000482582 DHX58Q96C10 678 aa13.12□□□□□ -0.31
TRAIP-208ENST00000482582 LBHD1Q9BQE6 289 aaPredicted RBP13.12□□□□□ -0.31
TRAIP-208ENST00000482582 RUSC1Q9BVN2 902 aa13.12□□□□□ -0.31
TRAIP-208ENST00000482582 SUGCTQ9HAC7 445 aa13.12□□□□□ -0.31
TRAIP-208ENST00000482582 FAM13BQ9NYF5 915 aa13.12□□□□□ -0.31
TRAIP-208ENST00000482582 PCDHA2Q9Y5H9 948 aa13.12□□□□□ -0.31
TRAIP-208ENST00000482582 MROH7Q68CQ1 1323 aa13.12□□□□□ -0.31
TRAIP-208ENST00000482582 NPHP3-ACAD11A0A0J9YXS1 232 aa13.11□□□□□ -0.31
TRAIP-208ENST00000482582 MAGEB2O15479 319 aa13.11□□□□□ -0.31
TRAIP-208ENST00000482582 SSBP05455 408 aaKnown RBP eCLIP13.11□□□□□ -0.31
TRAIP-208ENST00000482582 LIG1P18858 919 aa13.11□□□□□ -0.31
TRAIP-208ENST00000482582 STAT6P42226 847 aa13.11□□□□□ -0.31
TRAIP-208ENST00000482582 PTK7Q13308 1070 aa13.11□□□□□ -0.31
TRAIP-208ENST00000482582 EMC2Q15006 297 aa13.11□□□□□ -0.31
TRAIP-208ENST00000482582 RINT1Q6NUQ1 792 aa13.11□□□□□ -0.31
TRAIP-208ENST00000482582 CCDC73Q6ZRK6 1079 aa13.11□□□□□ -0.31
TRAIP-208ENST00000482582 C1orf186Q6ZWK4 172 aa13.11□□□□□ -0.31
TRAIP-208ENST00000482582 KCTD17Q8N5Z5 321 aa13.11□□□□□ -0.31
TRAIP-208ENST00000482582 METTL13Q8N6R0 699 aa13.11□□□□□ -0.31
TRAIP-208ENST00000482582 USP38Q8NB14 1042 aa13.11□□□□□ -0.31
TRAIP-208ENST00000482582 ENGASEQ8NFI3 743 aa13.11□□□□□ -0.31
TRAIP-208ENST00000482582 DNAJB3Q8WWF6 145 aa13.11□□□□□ -0.31
TRAIP-208ENST00000482582 LARP4BQ92615 738 aaKnown RBP13.11□□□□□ -0.31
TRAIP-208ENST00000482582 STAMQ92783 540 aa13.11□□□□□ -0.31
TRAIP-208ENST00000482582 TMEM143Q96AN5 459 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms