RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 EIF3HO15372 352 aaKnown RBP eCLIP16.27■□□□□ 0.19
ATG4B-220ENST00000482507 RPA1P27694 616 aa16.27■□□□□ 0.19
ATG4B-220ENST00000482507 JAG1P78504 1218 aa16.27■□□□□ 0.19
ATG4B-220ENST00000482507 CYP4A11Q02928 519 aa16.27■□□□□ 0.19
ATG4B-220ENST00000482507 EPHA7Q15375 998 aa16.27■□□□□ 0.19
ATG4B-220ENST00000482507 DPY19L2Q6NUT2 758 aa16.27■□□□□ 0.19
ATG4B-220ENST00000482507 GJB7Q6PEY0 223 aa16.27■□□□□ 0.19
ATG4B-220ENST00000482507 FRMD5Q7Z6J6 570 aa16.27■□□□□ 0.19
ATG4B-220ENST00000482507 KLHL7Q8IXQ5 586 aa16.27■□□□□ 0.19
ATG4B-220ENST00000482507 LRRC57Q8N9N7 239 aa16.27■□□□□ 0.19
ATG4B-220ENST00000482507 PROCA1Q8NCQ7 364 aaPredicted RBP16.27■□□□□ 0.19
ATG4B-220ENST00000482507 MKL1Q969V6 931 aa16.27■□□□□ 0.19
ATG4B-220ENST00000482507 RUSC1Q9BVN2 902 aa16.27■□□□□ 0.19
ATG4B-220ENST00000482507 PLCB1Q9NQ66 1216 aa16.27■□□□□ 0.19
ATG4B-220ENST00000482507 AFPP02771 609 aaKnown RBP16.26■□□□□ 0.19
ATG4B-220ENST00000482507 USH1GQ495M9 461 aa16.26■□□□□ 0.19
ATG4B-220ENST00000482507 DEFB129Q9H1M3 183 aa16.26■□□□□ 0.19
ATG4B-220ENST00000482507 NAGPAQ9UK23 515 aa16.26■□□□□ 0.19
ATG4B-220ENST00000482507 NENFQ9UMX5 172 aa16.26■□□□□ 0.19
ATG4B-220ENST00000482507 BTNL10A8MVZ5 291 aa16.26■□□□□ 0.19
ATG4B-220ENST00000482507 KCNK3O14649 394 aa16.26■□□□□ 0.19
ATG4B-220ENST00000482507 OPLAHO14841 1288 aa16.26■□□□□ 0.19
ATG4B-220ENST00000482507 PAK2Q13177 524 aa16.26■□□□□ 0.19
ATG4B-220ENST00000482507 EXOC3L4Q17RC7 722 aa16.26■□□□□ 0.19
ATG4B-220ENST00000482507 DCAF17Q5H9S7 520 aaPredicted RBP16.26■□□□□ 0.19
ATG4B-220ENST00000482507 MOXD1Q6UVY6 613 aa16.26■□□□□ 0.19
ATG4B-220ENST00000482507 DCAF4Q8WV16 495 aa16.26■□□□□ 0.19
ATG4B-220ENST00000482507 CCDC17Q96LX7 622 aa16.26■□□□□ 0.19
ATG4B-220ENST00000482507 GLT8D2Q9H1C3 349 aa16.26■□□□□ 0.19
ATG4B-220ENST00000482507 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.26■□□□□ 0.19
ATG4B-220ENST00000482507 DNM3Q9UQ16 869 aa16.26■□□□□ 0.19
ATG4B-220ENST00000482507 EML1O00423 815 aa16.25■□□□□ 0.19
ATG4B-220ENST00000482507 MSH4O15457 936 aa16.25■□□□□ 0.19
ATG4B-220ENST00000482507 SLC26A4O43511 780 aa16.25■□□□□ 0.19
ATG4B-220ENST00000482507 NPM3O75607 178 aaKnown RBP16.25■□□□□ 0.19
ATG4B-220ENST00000482507 MAGEA9P43362 315 aa16.25■□□□□ 0.19
ATG4B-220ENST00000482507 SKOR1P84550 965 aa16.25■□□□□ 0.19
ATG4B-220ENST00000482507 PDCLQ13371 301 aa16.25■□□□□ 0.19
ATG4B-220ENST00000482507 Q4G0T1 1027 aa16.25■□□□□ 0.19
ATG4B-220ENST00000482507 SLC35C1Q96A29 364 aa16.25■□□□□ 0.19
ATG4B-220ENST00000482507 SPAG5Q96R06 1193 aa16.25■□□□□ 0.19
ATG4B-220ENST00000482507 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.25■□□□□ 0.19
ATG4B-220ENST00000482507 GGA3Q9NZ52 723 aa16.25■□□□□ 0.19
ATG4B-220ENST00000482507 NYAP2Q9P242 653 aa16.25■□□□□ 0.19
ATG4B-220ENST00000482507 VAV3Q9UKW4 847 aa16.25■□□□□ 0.19
ATG4B-220ENST00000482507 CLIC2O15247 247 aa16.25■□□□□ 0.19
ATG4B-220ENST00000482507 KIF4AO95239 1232 aa16.25■□□□□ 0.19
ATG4B-220ENST00000482507 ECHS1P30084 290 aa16.25■□□□□ 0.19
ATG4B-220ENST00000482507 HOXA13P31271 388 aaPredicted RBP16.25■□□□□ 0.19
ATG4B-220ENST00000482507 ERVK-9P63128 1117 aa16.25■□□□□ 0.19
ATG4B-220ENST00000482507 AP3B2Q13367 1082 aa16.25■□□□□ 0.19
ATG4B-220ENST00000482507 CERKLQ49MI3 558 aaPredicted RBP16.25■□□□□ 0.19
ATG4B-220ENST00000482507 MREGQ8N565 214 aa16.25■□□□□ 0.19
ATG4B-220ENST00000482507 OLIG1Q8TAK6 271 aa16.25■□□□□ 0.19
ATG4B-220ENST00000482507 BCAS4Q8TDM0 211 aa16.25■□□□□ 0.19
ATG4B-220ENST00000482507 RUFY1Q96T51 708 aa16.25■□□□□ 0.19
ATG4B-220ENST00000482507 BHMT2Q9H2M3 363 aa16.25■□□□□ 0.19
ATG4B-220ENST00000482507 RGL1Q9NZL6 768 aa16.25■□□□□ 0.19
ATG4B-220ENST00000482507 SFI1A8K8P3 1242 aa16.24■□□□□ 0.19
ATG4B-220ENST00000482507 VGLL3A8MV65 326 aa16.24■□□□□ 0.19
ATG4B-220ENST00000482507 PDXKO00764 312 aa16.24■□□□□ 0.19
ATG4B-220ENST00000482507 NR3C1P04150 777 aa16.24■□□□□ 0.19
ATG4B-220ENST00000482507 ATP1A2P50993 1020 aa16.24■□□□□ 0.19
ATG4B-220ENST00000482507 JAM2P57087 298 aa16.24■□□□□ 0.19
ATG4B-220ENST00000482507 RPS6KA1Q15418 735 aa16.24■□□□□ 0.19
ATG4B-220ENST00000482507 CFAP58Q5T655 872 aa16.24■□□□□ 0.19
ATG4B-220ENST00000482507 ALKBH5Q6P6C2 394 aaKnown RBP16.24■□□□□ 0.19
ATG4B-220ENST00000482507 GBP6Q6ZN66 633 aa16.24■□□□□ 0.19
ATG4B-220ENST00000482507 BBXQ8WY36 941 aaPredicted RBP16.24■□□□□ 0.19
ATG4B-220ENST00000482507 PGAP2Q9UHJ9 254 aa16.24■□□□□ 0.19
ATG4B-220ENST00000482507 F5H6K3 240 aa16.24■□□□□ 0.19
ATG4B-220ENST00000482507 XRCC5P13010 732 aaKnown RBP16.24■□□□□ 0.19
ATG4B-220ENST00000482507 SREBF1P36956 1147 aa16.24■□□□□ 0.19
ATG4B-220ENST00000482507 KLRC3Q07444 240 aa16.24■□□□□ 0.19
ATG4B-220ENST00000482507 NBPF12Q5TAG4 269 aaPredicted RBP16.24■□□□□ 0.19
ATG4B-220ENST00000482507 TCERG1LQ5VWI1 586 aa16.24■□□□□ 0.19
ATG4B-220ENST00000482507 PACS2Q86VP3 889 aa16.24■□□□□ 0.19
ATG4B-220ENST00000482507 SCFD2Q8WU76 684 aa16.24■□□□□ 0.19
ATG4B-220ENST00000482507 TEPSINQ96N21 525 aa16.24■□□□□ 0.19
ATG4B-220ENST00000482507 TBX3O15119 743 aa16.23■□□□□ 0.19
ATG4B-220ENST00000482507 TGFB1I1O43294 461 aa16.23■□□□□ 0.19
ATG4B-220ENST00000482507 PRKCIP41743 596 aa16.23■□□□□ 0.19
ATG4B-220ENST00000482507 NOP2P46087 812 aaKnown RBP16.23■□□□□ 0.19
ATG4B-220ENST00000482507 BMT2Q1RMZ1 405 aa16.23■□□□□ 0.19
ATG4B-220ENST00000482507 FAM83AQ86UY5 434 aa16.23■□□□□ 0.19
ATG4B-220ENST00000482507 TPCN2Q8NHX9 752 aa16.23■□□□□ 0.19
ATG4B-220ENST00000482507 AMNQ9BXJ7 453 aa16.23■□□□□ 0.19
ATG4B-220ENST00000482507 AP1M1Q9BXS5 423 aa16.23■□□□□ 0.19
ATG4B-220ENST00000482507 ATRNL1Q5VV63 1379 aa16.23■□□□□ 0.19
ATG4B-220ENST00000482507 DDX3XO00571 662 aaKnown RBP eCLIP16.23■□□□□ 0.192e-7■■□□□ 13.3
ATG4B-220ENST00000482507 ZBTB39O15060 712 aa16.23■□□□□ 0.19
ATG4B-220ENST00000482507 CEP104O60308 925 aa16.23■□□□□ 0.19
ATG4B-220ENST00000482507 NDUFB10O96000 172 aa16.23■□□□□ 0.19
ATG4B-220ENST00000482507 ICA1Q05084 483 aa16.23■□□□□ 0.19
ATG4B-220ENST00000482507 FKBP1CQ5VVH2 108 aa16.23■□□□□ 0.19
ATG4B-220ENST00000482507 DDX42Q86XP3 938 aaKnown RBP eCLIP16.23■□□□□ 0.19
ATG4B-220ENST00000482507 METTL13Q8N6R0 699 aa16.23■□□□□ 0.19
ATG4B-220ENST00000482507 ERMNQ8TAM6 284 aa16.23■□□□□ 0.19
ATG4B-220ENST00000482507 TAF4BQ92750 862 aa16.23■□□□□ 0.19
ATG4B-220ENST00000482507 BORCS6Q96GS4 357 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms