RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 NPAS4Q8IUM7 802 aa11.8□□□□□ -0.52
CPSF4-212ENST00000482251 HLA-CQ95604 372 aa11.8□□□□□ -0.52
CPSF4-212ENST00000482251 SAMD11Q96NU1 681 aa11.8□□□□□ -0.52
CPSF4-212ENST00000482251 MAP7D2Q96T17 732 aa11.8□□□□□ -0.52
CPSF4-212ENST00000482251 UHRF1Q96T88 793 aaPredicted RBP11.8□□□□□ -0.52
CPSF4-212ENST00000482251 FTHL17Q9BXU8 183 aa11.8□□□□□ -0.52
CPSF4-212ENST00000482251 LRFN2Q9ULH4 789 aa11.8□□□□□ -0.52
CPSF4-212ENST00000482251 ST3GAL5Q9UNP4 418 aa11.8□□□□□ -0.52
CPSF4-212ENST00000482251 MRPL42Q9Y6G3 142 aaKnown RBP11.8□□□□□ -0.52
CPSF4-212ENST00000482251 CYP3A7-CYP3A51PA0A087WV96 503 aa11.79□□□□□ -0.52
CPSF4-212ENST00000482251 H3BNC9 293 aa11.79□□□□□ -0.52
CPSF4-212ENST00000482251 EML1O00423 815 aa11.79□□□□□ -0.52
CPSF4-212ENST00000482251 GPR32O75388 356 aa11.79□□□□□ -0.52
CPSF4-212ENST00000482251 FDPSP14324 419 aaKnown RBP11.79□□□□□ -0.52
CPSF4-212ENST00000482251 FGFR4P22455 802 aa11.79□□□□□ -0.52
CPSF4-212ENST00000482251 CYP3A7P24462 503 aa11.79□□□□□ -0.52
CPSF4-212ENST00000482251 KRT2P35908 639 aa11.79□□□□□ -0.52
CPSF4-212ENST00000482251 NLRP11P59045 1033 aaKnown RBP11.79□□□□□ -0.52
CPSF4-212ENST00000482251 TBC1D8BQ0IIM8 1120 aa11.79□□□□□ -0.52
CPSF4-212ENST00000482251 ST3GAL1Q11201 340 aa11.79□□□□□ -0.52
CPSF4-212ENST00000482251 DRP2Q13474 957 aa11.79□□□□□ -0.52
CPSF4-212ENST00000482251 PTPROQ16827 1216 aa11.79□□□□□ -0.52
CPSF4-212ENST00000482251 PLA2G4FQ68DD2 849 aa11.79□□□□□ -0.52
CPSF4-212ENST00000482251 MOXD1Q6UVY6 613 aa11.79□□□□□ -0.52
CPSF4-212ENST00000482251 EP400NLQ6ZTU2 488 aa11.79□□□□□ -0.52
CPSF4-212ENST00000482251 POTEDQ86YR6 584 aa11.79□□□□□ -0.52
CPSF4-212ENST00000482251 NSUN7Q8NE18 718 aaKnown RBP11.79□□□□□ -0.52
CPSF4-212ENST00000482251 ZNF689Q96CS4 500 aaPredicted RBP11.79□□□□□ -0.52
CPSF4-212ENST00000482251 MRPL38Q96DV4 380 aaKnown RBP11.79□□□□□ -0.52
CPSF4-212ENST00000482251 MBOAT7Q96N66 472 aa11.79□□□□□ -0.52
CPSF4-212ENST00000482251 ADAM2Q99965 735 aa11.79□□□□□ -0.52
CPSF4-212ENST00000482251 LMCD1Q9NZU5 365 aa11.79□□□□□ -0.52
CPSF4-212ENST00000482251 HCSTQ9UBK5 93 aa11.79□□□□□ -0.52
CPSF4-212ENST00000482251 SQORQ9Y6N5 450 aa11.79□□□□□ -0.52
CPSF4-212ENST00000482251 TNFRSF10AO00220 468 aa11.78□□□□□ -0.52
CPSF4-212ENST00000482251 GRM6O15303 877 aa11.78□□□□□ -0.52
CPSF4-212ENST00000482251 MAGEB2O15479 319 aa11.78□□□□□ -0.52
CPSF4-212ENST00000482251 KCNA5P22460 613 aa11.78□□□□□ -0.52
CPSF4-212ENST00000482251 SARSP49591 514 aaKnown RBP11.78□□□□□ -0.52
CPSF4-212ENST00000482251 CRYBB1P53674 252 aaPredicted RBP11.78□□□□□ -0.52
CPSF4-212ENST00000482251 AAK1Q2M2I8 961 aa11.78□□□□□ -0.52
CPSF4-212ENST00000482251 TIGD5Q53EQ6 642 aa11.78□□□□□ -0.52
CPSF4-212ENST00000482251 TCEAL5Q5H9L2 206 aa11.78□□□□□ -0.52
CPSF4-212ENST00000482251 B3GNT9Q6UX72 402 aa11.78□□□□□ -0.52
CPSF4-212ENST00000482251 LINC01465Q8N7H1 131 aa11.78□□□□□ -0.52
CPSF4-212ENST00000482251 WASF1Q92558 559 aa11.78□□□□□ -0.52
CPSF4-212ENST00000482251 C11orf84Q9BUA3 381 aaPredicted RBP11.78□□□□□ -0.52
CPSF4-212ENST00000482251 UBE2ZQ9H832 354 aaPredicted RBP11.78□□□□□ -0.52
CPSF4-212ENST00000482251 KCNMB3Q9NPA1 279 aa11.78□□□□□ -0.52
CPSF4-212ENST00000482251 NRBP2Q9NSY0 501 aa11.78□□□□□ -0.52
CPSF4-212ENST00000482251 BMP2KQ9NSY1 1161 aaPredicted RBP11.78□□□□□ -0.52
CPSF4-212ENST00000482251 VAV3Q9UKW4 847 aa11.78□□□□□ -0.52
CPSF4-212ENST00000482251 COG5Q9UP83 839 aa11.78□□□□□ -0.52
CPSF4-212ENST00000482251 TBKBP1A7MCY6 615 aa11.77□□□□□ -0.53
CPSF4-212ENST00000482251 DDX11L8A8MPP1 907 aa11.77□□□□□ -0.53
CPSF4-212ENST00000482251 GPR182O15218 404 aa11.77□□□□□ -0.53
CPSF4-212ENST00000482251 MARCH6O60337 910 aa11.77□□□□□ -0.53
CPSF4-212ENST00000482251 CSDE1O75534 798 aaKnown RBP11.77□□□□□ -0.53
CPSF4-212ENST00000482251 STAG3L1P0CL83 205 aa11.77□□□□□ -0.53
CPSF4-212ENST00000482251 FGFR1P11362 822 aa11.77□□□□□ -0.53
CPSF4-212ENST00000482251 BMP1P13497 986 aa11.77□□□□□ -0.53
CPSF4-212ENST00000482251 TMOD1P28289 359 aa11.77□□□□□ -0.53
CPSF4-212ENST00000482251 BMPR1AP36894 532 aa11.77□□□□□ -0.53
CPSF4-212ENST00000482251 GPC3P51654 580 aa11.77□□□□□ -0.53
CPSF4-212ENST00000482251 GUCY1B3Q02153 619 aa11.77□□□□□ -0.53
CPSF4-212ENST00000482251 NCAPH2Q6IBW4 605 aa11.77□□□□□ -0.53
CPSF4-212ENST00000482251 CCDC83Q8IWF9 413 aa11.77□□□□□ -0.53
CPSF4-212ENST00000482251 CMTR2Q8IYT2 770 aaKnown RBP11.77□□□□□ -0.53
CPSF4-212ENST00000482251 FAM177A1Q8N128 213 aaPredicted RBP11.77□□□□□ -0.53
CPSF4-212ENST00000482251 CRIPAKQ8N1N5 446 aa11.77□□□□□ -0.53
CPSF4-212ENST00000482251 RDM1Q8NG50 284 aa11.77□□□□□ -0.53
CPSF4-212ENST00000482251 NLRP7Q8WX94 980 aa11.77□□□□□ -0.53
CPSF4-212ENST00000482251 ADAMTS10Q9H324 1103 aa11.77□□□□□ -0.53
CPSF4-212ENST00000482251 BRMS1Q9HCU9 246 aa11.77□□□□□ -0.53
CPSF4-212ENST00000482251 ALG13Q9NP73 1137 aaKnown RBP11.77□□□□□ -0.53
CPSF4-212ENST00000482251 WRAP73Q9P2S5 460 aaPredicted RBP11.77□□□□□ -0.53
CPSF4-212ENST00000482251 PCDHB7Q9Y5E2 793 aa11.77□□□□□ -0.53
CPSF4-212ENST00000482251 BRWD1Q9NSI6 2320 aa11.77□□□□□ -0.53
CPSF4-212ENST00000482251 FNDC1Q4ZHG4 1894 aaPredicted RBP11.76□□□□□ -0.53
CPSF4-212ENST00000482251 C5orf67F2Z3F1 127 aa11.76□□□□□ -0.53
CPSF4-212ENST00000482251 H3BQ06 376 aaPredicted RBP11.76□□□□□ -0.53
CPSF4-212ENST00000482251 WNT7AO00755 349 aa11.76□□□□□ -0.53
CPSF4-212ENST00000482251 STBD1O95210 358 aa11.76□□□□□ -0.53
CPSF4-212ENST00000482251 GCFC2P16383 781 aaKnown RBP11.76□□□□□ -0.53
CPSF4-212ENST00000482251 CYP4A11Q02928 519 aa11.76□□□□□ -0.53
CPSF4-212ENST00000482251 PPP2R5CQ13362 524 aa11.76□□□□□ -0.53
CPSF4-212ENST00000482251 TARBP2Q15633 366 aaKnown RBP11.76□□□□□ -0.53
CPSF4-212ENST00000482251 XKR3Q5GH77 459 aa11.76□□□□□ -0.53
CPSF4-212ENST00000482251 SPOUT1Q5T280 376 aaKnown RBP11.76□□□□□ -0.53
CPSF4-212ENST00000482251 FAM102BQ5T8I3 360 aa11.76□□□□□ -0.53
CPSF4-212ENST00000482251 PPP4R3AQ6IN85 833 aa11.76□□□□□ -0.53
CPSF4-212ENST00000482251 DIS3L2Q8IYB7 885 aaKnown RBP11.76□□□□□ -0.53
CPSF4-212ENST00000482251 RNF169Q8NCN4 708 aa11.76□□□□□ -0.53
CPSF4-212ENST00000482251 HAS1Q92839 578 aa11.76□□□□□ -0.53
CPSF4-212ENST00000482251 CLP1Q92989 425 aaKnown RBP11.76□□□□□ -0.53
CPSF4-212ENST00000482251 TNFRSF25Q93038 417 aa11.76□□□□□ -0.53
CPSF4-212ENST00000482251 NSUN3Q9H649 340 aaKnown RBP11.76□□□□□ -0.53
CPSF4-212ENST00000482251 RGS18Q9NS28 235 aa11.76□□□□□ -0.53
CPSF4-212ENST00000482251 C1orf112Q9NSG2 853 aa11.76□□□□□ -0.53
CPSF4-212ENST00000482251 RWDD3Q9Y3V2 267 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms