RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 CDHR5Q9HBB8 845 aa13.34□□□□□ -0.27
HMGN1-213ENST00000482192 MTUS1Q9ULD2 1270 aa13.34□□□□□ -0.27
HMGN1-213ENST00000482192 PCDHA12Q9UN75 941 aa13.34□□□□□ -0.27
HMGN1-213ENST00000482192 AKT3Q9Y243 479 aa13.34□□□□□ -0.27
HMGN1-213ENST00000482192 NOC2LQ9Y3T9 749 aaKnown RBP13.34□□□□□ -0.27
HMGN1-213ENST00000482192 LAMA2P24043 3122 aaKnown RBP13.33□□□□□ -0.27
HMGN1-213ENST00000482192 TMEM150BA6NC51 233 aa13.33□□□□□ -0.28
HMGN1-213ENST00000482192 DDX11L8A8MPP1 907 aa13.33□□□□□ -0.28
HMGN1-213ENST00000482192 RFXAPO00287 272 aa13.33□□□□□ -0.28
HMGN1-213ENST00000482192 MCM2P49736 904 aa13.33□□□□□ -0.28
HMGN1-213ENST00000482192 DNM2P50570 870 aa13.33□□□□□ -0.28
HMGN1-213ENST00000482192 NLRP11P59045 1033 aaKnown RBP13.33□□□□□ -0.28
HMGN1-213ENST00000482192 GNL2Q13823 731 aaKnown RBP13.33□□□□□ -0.28
HMGN1-213ENST00000482192 NCAPH2Q6IBW4 605 aa13.33□□□□□ -0.28
HMGN1-213ENST00000482192 ANO5Q75V66 913 aa13.33□□□□□ -0.28
HMGN1-213ENST00000482192 LINC01599Q8WXQ3 324 aa13.33□□□□□ -0.28
HMGN1-213ENST00000482192 SAMD11Q96NU1 681 aa13.33□□□□□ -0.28
HMGN1-213ENST00000482192 LXNQ9BS40 222 aa13.33□□□□□ -0.28
HMGN1-213ENST00000482192 TMX1Q9H3N1 280 aa13.33□□□□□ -0.28
HMGN1-213ENST00000482192 ERVK-5Q9HDB9 667 aa13.33□□□□□ -0.28
HMGN1-213ENST00000482192 ST3GAL5Q9UNP4 418 aa13.33□□□□□ -0.28
HMGN1-213ENST00000482192 KIF3AQ9Y496 699 aa13.33□□□□□ -0.28
HMGN1-213ENST00000482192 IGKV6-21A0A0C4DH24 114 aa13.32□□□□□ -0.28
HMGN1-213ENST00000482192 WNT7AO00755 349 aa13.32□□□□□ -0.28
HMGN1-213ENST00000482192 MAFO75444 373 aaPredicted RBP13.32□□□□□ -0.28
HMGN1-213ENST00000482192 GPC3P51654 580 aa13.32□□□□□ -0.28
HMGN1-213ENST00000482192 CDC42EP1Q00587 391 aa13.32□□□□□ -0.28
HMGN1-213ENST00000482192 GRB10Q13322 594 aa13.32□□□□□ -0.28
HMGN1-213ENST00000482192 ORC2Q13416 577 aaPredicted RBP13.32□□□□□ -0.28
HMGN1-213ENST00000482192 RTN4RL1Q86UN2 441 aaPredicted RBP13.32□□□□□ -0.28
HMGN1-213ENST00000482192 NPAS4Q8IUM7 802 aa13.32□□□□□ -0.28
HMGN1-213ENST00000482192 NOSTRINQ8IVI9 506 aa13.32□□□□□ -0.28
HMGN1-213ENST00000482192 C4orf19Q8IY42 314 aa13.32□□□□□ -0.28
HMGN1-213ENST00000482192 SLC7A3Q8WY07 619 aa13.32□□□□□ -0.28
HMGN1-213ENST00000482192 PPM1EQ8WY54 764 aa13.32□□□□□ -0.28
HMGN1-213ENST00000482192 SCLT1Q96NL6 688 aa13.32□□□□□ -0.28
HMGN1-213ENST00000482192 MTMR9Q96QG7 549 aa13.32□□□□□ -0.28
HMGN1-213ENST00000482192 CEP89Q96ST8 783 aa13.32□□□□□ -0.28
HMGN1-213ENST00000482192 JPH2Q9BR39 696 aaPredicted RBP13.32□□□□□ -0.28
HMGN1-213ENST00000482192 SH2D3AQ9BRG2 576 aa13.32□□□□□ -0.28
HMGN1-213ENST00000482192 ADAMTS10Q9H324 1103 aa13.32□□□□□ -0.28
HMGN1-213ENST00000482192 ZSWIM4Q9H7M6 989 aa13.32□□□□□ -0.28
HMGN1-213ENST00000482192 TTC12Q9H892 705 aaPredicted RBP13.32□□□□□ -0.28
HMGN1-213ENST00000482192 CYP26B1Q9NR63 512 aa13.32□□□□□ -0.28
HMGN1-213ENST00000482192 C1orf112Q9NSG2 853 aa13.32□□□□□ -0.28
HMGN1-213ENST00000482192 RNF216Q9NWF9 866 aaPredicted RBP13.32□□□□□ -0.28
HMGN1-213ENST00000482192 PPME1Q9Y570 386 aa13.32□□□□□ -0.28
HMGN1-213ENST00000482192 MTCH2Q9Y6C9 303 aa13.32□□□□□ -0.28
HMGN1-213ENST00000482192 ADGRA3Q8IWK6 1321 aa13.32□□□□□ -0.28
HMGN1-213ENST00000482192 CDH23Q9H251 3354 aa13.32□□□□□ -0.28
HMGN1-213ENST00000482192 MYH9P35579 1960 aaKnown RBP13.31□□□□□ -0.28
HMGN1-213ENST00000482192 DENND3A2RUS2 1198 aa13.31□□□□□ -0.28
HMGN1-213ENST00000482192 LPXNO60711 386 aa13.31□□□□□ -0.28
HMGN1-213ENST00000482192 DGKIO75912 1065 aa13.31□□□□□ -0.28
HMGN1-213ENST00000482192 STAG3L1P0CL83 205 aa13.31□□□□□ -0.28
HMGN1-213ENST00000482192 ATP2B1P20020 1258 aa13.31□□□□□ -0.28
HMGN1-213ENST00000482192 EIF4BP23588 611 aaKnown RBP13.31□□□□□ -0.28
HMGN1-213ENST00000482192 YWHABP31946 246 aaKnown RBP13.31□□□□□ -0.28
HMGN1-213ENST00000482192 MCM7P33993 719 aa13.31□□□□□ -0.28
HMGN1-213ENST00000482192 TXKP42681 527 aa13.31□□□□□ -0.28
HMGN1-213ENST00000482192 CYP4A11Q02928 519 aa13.31□□□□□ -0.28
HMGN1-213ENST00000482192 CCDC85BQ15834 202 aaPredicted RBP13.31□□□□□ -0.28
HMGN1-213ENST00000482192 PLA2G4FQ68DD2 849 aa13.31□□□□□ -0.28
HMGN1-213ENST00000482192 OTUD6AQ7L8S5 288 aa13.31□□□□□ -0.28
HMGN1-213ENST00000482192 FAM228AQ86W67 206 aa13.31□□□□□ -0.28
HMGN1-213ENST00000482192 EXOC8Q8IYI6 725 aa13.31□□□□□ -0.28
HMGN1-213ENST00000482192 CRIPAKQ8N1N5 446 aa13.31□□□□□ -0.28
HMGN1-213ENST00000482192 MICALL1Q8N3F8 863 aa13.31□□□□□ -0.28
HMGN1-213ENST00000482192 FIBCD1Q8N539 461 aa13.31□□□□□ -0.28
HMGN1-213ENST00000482192 FBXO22Q8NEZ5 403 aa13.31□□□□□ -0.28
HMGN1-213ENST00000482192 NEK9Q8TD19 979 aa13.31□□□□□ -0.28
HMGN1-213ENST00000482192 GDPD5Q8WTR4 605 aa13.31□□□□□ -0.28
HMGN1-213ENST00000482192 NLRP7Q8WX94 980 aa13.31□□□□□ -0.28
HMGN1-213ENST00000482192 TMX3Q96JJ7 454 aa13.31□□□□□ -0.28
HMGN1-213ENST00000482192 CEP170P1Q96L14 293 aa13.31□□□□□ -0.28
HMGN1-213ENST00000482192 C17orf80Q9BSJ5 609 aa13.31□□□□□ -0.28
HMGN1-213ENST00000482192 RC3H2Q9HBD1 1191 aaKnown RBP13.31□□□□□ -0.28
HMGN1-213ENST00000482192 RGS18Q9NS28 235 aa13.31□□□□□ -0.28
HMGN1-213ENST00000482192 RGL1Q9NZL6 768 aa13.31□□□□□ -0.28
HMGN1-213ENST00000482192 LMCD1Q9NZU5 365 aa13.31□□□□□ -0.28
HMGN1-213ENST00000482192 WRAP73Q9P2S5 460 aaPredicted RBP13.31□□□□□ -0.28
HMGN1-213ENST00000482192 COL4A4P53420 1690 aaPredicted RBP13.31□□□□□ -0.28
HMGN1-213ENST00000482192 CD2BP2O95400 341 aaKnown RBP13.3□□□□□ -0.28
HMGN1-213ENST00000482192 DARSP14868 501 aaKnown RBP13.3□□□□□ -0.28
HMGN1-213ENST00000482192 RFC5P40937 340 aa13.3□□□□□ -0.28
HMGN1-213ENST00000482192 TRAPPC10P48553 1259 aa13.3□□□□□ -0.28
HMGN1-213ENST00000482192 SARSP49591 514 aaKnown RBP13.3□□□□□ -0.28
HMGN1-213ENST00000482192 POLGP54098 1239 aaPredicted RBP13.3□□□□□ -0.28
HMGN1-213ENST00000482192 DRP2Q13474 957 aa13.3□□□□□ -0.28
HMGN1-213ENST00000482192 BTG3Q14201 252 aaPredicted RBP13.3□□□□□ -0.28
HMGN1-213ENST00000482192 CTTNQ14247 550 aaKnown RBP13.3□□□□□ -0.28
HMGN1-213ENST00000482192 EPC2Q52LR7 807 aa13.3□□□□□ -0.28
HMGN1-213ENST00000482192 TTC38Q5R3I4 469 aa13.3□□□□□ -0.28
HMGN1-213ENST00000482192 SLC24A5Q71RS6 500 aa13.3□□□□□ -0.28
HMGN1-213ENST00000482192 TPH2Q8IWU9 490 aa13.3□□□□□ -0.28
HMGN1-213ENST00000482192 ZNF689Q96CS4 500 aaPredicted RBP13.3□□□□□ -0.28
HMGN1-213ENST00000482192 DYDC2Q96IM9 177 aa13.3□□□□□ -0.28
HMGN1-213ENST00000482192 ADAM2Q99965 735 aa13.3□□□□□ -0.28
HMGN1-213ENST00000482192 HSD17B14Q9BPX1 270 aa13.3□□□□□ -0.28
HMGN1-213ENST00000482192 EIF2AK1Q9BQI3 630 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms