RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 CIITAP33076 1130 aa13.1□□□□□ -0.31
GARNL3-217ENST00000481875 FXR2P51116 673 aaKnown RBP eCLIP13.1□□□□□ -0.31
GARNL3-217ENST00000481875 AK2P54819 239 aa13.1□□□□□ -0.31
GARNL3-217ENST00000481875 SETQ01105 290 aaPredicted RBP13.1□□□□□ -0.31
GARNL3-217ENST00000481875 DLX2Q07687 328 aaPredicted RBP13.1□□□□□ -0.31
GARNL3-217ENST00000481875 APOBRQ0VD83 1088 aa13.1□□□□□ -0.31
GARNL3-217ENST00000481875 HERC4Q5GLZ8 1057 aaPredicted RBP13.1□□□□□ -0.31
GARNL3-217ENST00000481875 PDE12Q6L8Q7 609 aaKnown RBP13.1□□□□□ -0.31
GARNL3-217ENST00000481875 SLC24A5Q71RS6 500 aa13.1□□□□□ -0.31
GARNL3-217ENST00000481875 RAB11FIP4Q86YS3 637 aa13.1□□□□□ -0.31
GARNL3-217ENST00000481875 CCDC60Q8IWA6 550 aaPredicted RBP13.1□□□□□ -0.31
GARNL3-217ENST00000481875 SMAP1Q8IYB5 467 aaPredicted RBP13.1□□□□□ -0.31
GARNL3-217ENST00000481875 KLHL23Q8NBE8 558 aa13.1□□□□□ -0.31
GARNL3-217ENST00000481875 TRAPPC12Q8WVT3 735 aa13.1□□□□□ -0.31
GARNL3-217ENST00000481875 ZBTB10Q96DT7 871 aa13.1□□□□□ -0.31
GARNL3-217ENST00000481875 LARP6Q9BRS8 491 aaKnown RBP13.1□□□□□ -0.31
GARNL3-217ENST00000481875 AGXT2Q9BYV1 514 aa13.1□□□□□ -0.31
GARNL3-217ENST00000481875 ELAC1Q9H777 363 aaKnown RBP13.1□□□□□ -0.31
GARNL3-217ENST00000481875 ALG13Q9NP73 1137 aaKnown RBP13.1□□□□□ -0.31
GARNL3-217ENST00000481875 KLF18A0A0U1RQI7 1052 aa13.09□□□□□ -0.31
GARNL3-217ENST00000481875 C9IYK1 514 aa13.09□□□□□ -0.31
GARNL3-217ENST00000481875 IRS1P35568 1242 aa13.09□□□□□ -0.31
GARNL3-217ENST00000481875 CRYBB1P53674 252 aaPredicted RBP13.09□□□□□ -0.31
GARNL3-217ENST00000481875 EVCP57679 992 aa13.09□□□□□ -0.31
GARNL3-217ENST00000481875 TOB2Q14106 344 aaPredicted RBP13.09□□□□□ -0.31
GARNL3-217ENST00000481875 CSPP1Q1MSJ5 1256 aa13.09□□□□□ -0.31
GARNL3-217ENST00000481875 MIS18BP1Q6P0N0 1132 aa13.09□□□□□ -0.31
GARNL3-217ENST00000481875 PLA2G4DQ86XP0 818 aa13.09□□□□□ -0.31
GARNL3-217ENST00000481875 SMRP1Q8NCR6 262 aa13.09□□□□□ -0.31
GARNL3-217ENST00000481875 CCDC12Q8WUD4 166 aaPredicted RBP13.09□□□□□ -0.31
GARNL3-217ENST00000481875 ZNF302Q9NR11 478 aa13.09□□□□□ -0.31
GARNL3-217ENST00000481875 CD207Q9UJ71 328 aa13.09□□□□□ -0.31
GARNL3-217ENST00000481875 PCDHB7Q9Y5E2 793 aa13.09□□□□□ -0.31
GARNL3-217ENST00000481875 CACNA1HO95180 2353 aa13.09□□□□□ -0.31
GARNL3-217ENST00000481875 FAM86C2PA6NEL3 165 aa13.08□□□□□ -0.32
GARNL3-217ENST00000481875 GOLGA8AA7E2F4 631 aa13.08□□□□□ -0.32
GARNL3-217ENST00000481875 GOLGA8BA8MQT2 603 aa13.08□□□□□ -0.32
GARNL3-217ENST00000481875 MAGEB2O15479 319 aa13.08□□□□□ -0.32
GARNL3-217ENST00000481875 PRPF3O43395 683 aaKnown RBP13.08□□□□□ -0.32
GARNL3-217ENST00000481875 GPR32O75388 356 aa13.08□□□□□ -0.32
GARNL3-217ENST00000481875 RPS6KA5O75582 802 aa13.08□□□□□ -0.32
GARNL3-217ENST00000481875 C22orf31O95567 290 aa13.08□□□□□ -0.32
GARNL3-217ENST00000481875 GNA11P29992 359 aa13.08□□□□□ -0.32
GARNL3-217ENST00000481875 ZNF76P36508 570 aa13.08□□□□□ -0.32
GARNL3-217ENST00000481875 TMEM62Q0P6H9 643 aa13.08□□□□□ -0.32
GARNL3-217ENST00000481875 DSC3Q14574 896 aa13.08□□□□□ -0.32
GARNL3-217ENST00000481875 CBX2Q14781 532 aaPredicted RBP13.08□□□□□ -0.32
GARNL3-217ENST00000481875 PKN1Q16512 942 aa13.08□□□□□ -0.32
GARNL3-217ENST00000481875 SWSAP1Q6NVH7 229 aa13.08□□□□□ -0.32
GARNL3-217ENST00000481875 PDXDC2PQ6P474 469 aa13.08□□□□□ -0.32
GARNL3-217ENST00000481875 TMEM184AQ6ZMB5 413 aa13.08□□□□□ -0.32
GARNL3-217ENST00000481875 LINC01465Q8N7H1 131 aa13.08□□□□□ -0.32
GARNL3-217ENST00000481875 POF1BQ8WVV4 589 aa13.08□□□□□ -0.32
GARNL3-217ENST00000481875 TMEM40Q8WWA1 233 aa13.08□□□□□ -0.32
GARNL3-217ENST00000481875 PGBD1Q96JS3 809 aa13.08□□□□□ -0.32
GARNL3-217ENST00000481875 CDHR5Q9HBB8 845 aa13.08□□□□□ -0.32
GARNL3-217ENST00000481875 C6orf50Q9HD87 102 aa13.08□□□□□ -0.32
GARNL3-217ENST00000481875 AAASQ9NRG9 546 aa13.08□□□□□ -0.32
GARNL3-217ENST00000481875 TMEM260Q9NX78 707 aa13.08□□□□□ -0.32
GARNL3-217ENST00000481875 CLEC1BQ9P126 229 aa13.08□□□□□ -0.32
GARNL3-217ENST00000481875 ST3GAL5Q9UNP4 418 aa13.08□□□□□ -0.32
GARNL3-217ENST00000481875 CEP131Q9UPN4 1083 aa13.08□□□□□ -0.32
GARNL3-217ENST00000481875 LIMCH1Q9UPQ0 1083 aa13.08□□□□□ -0.32
GARNL3-217ENST00000481875 LZTS1Q9Y250 596 aa13.08□□□□□ -0.32
GARNL3-217ENST00000481875 NOC2LQ9Y3T9 749 aaKnown RBP13.08□□□□□ -0.32
GARNL3-217ENST00000481875 PCDHB12Q9Y5F1 795 aa13.08□□□□□ -0.32
GARNL3-217ENST00000481875 PCDHA10Q9Y5I2 948 aa13.08□□□□□ -0.32
GARNL3-217ENST00000481875 BACH1O14867 736 aa13.07□□□□□ -0.32
GARNL3-217ENST00000481875 MGEA5O60502 916 aa13.07□□□□□ -0.32
GARNL3-217ENST00000481875 GTF2F1P35269 517 aaKnown RBP eCLIP13.07□□□□□ -0.32
GARNL3-217ENST00000481875 ADD1P35611 737 aaKnown RBP13.07□□□□□ -0.32
GARNL3-217ENST00000481875 NFX1Q12986 1120 aaKnown RBP13.07□□□□□ -0.32
GARNL3-217ENST00000481875 BMP8AQ7Z5Y6 402 aa13.07□□□□□ -0.32
GARNL3-217ENST00000481875 REXO1Q8N1G1 1221 aaKnown RBP13.07□□□□□ -0.32
GARNL3-217ENST00000481875 BICD2Q8TD16 824 aa13.07□□□□□ -0.32
GARNL3-217ENST00000481875 RASGRP4Q8TDF6 673 aa13.07□□□□□ -0.32
GARNL3-217ENST00000481875 LENG9Q96B70 501 aa13.07□□□□□ -0.32
GARNL3-217ENST00000481875 FAM167AQ96KS9 214 aa13.07□□□□□ -0.32
GARNL3-217ENST00000481875 CDCA3Q99618 268 aaPredicted RBP13.07□□□□□ -0.32
GARNL3-217ENST00000481875 ADAM2Q99965 735 aa13.07□□□□□ -0.32
GARNL3-217ENST00000481875 ZNF577Q9BSK1 485 aa13.07□□□□□ -0.32
GARNL3-217ENST00000481875 TMEM161AQ9NX61 479 aa13.07□□□□□ -0.32
GARNL3-217ENST00000481875 LRFN2Q9ULH4 789 aa13.07□□□□□ -0.32
GARNL3-217ENST00000481875 LOC730098B7Z3J9 87 aa13.06□□□□□ -0.32
GARNL3-217ENST00000481875 LINC01565O15544 149 aa13.06□□□□□ -0.32
GARNL3-217ENST00000481875 PSAPP07602 524 aa13.06□□□□□ -0.32
GARNL3-217ENST00000481875 ATF7P17544 494 aaPredicted RBP13.06□□□□□ -0.32
GARNL3-217ENST00000481875 PDIA3P30101 505 aaKnown RBP13.06□□□□□ -0.32
GARNL3-217ENST00000481875 MCM2P49736 904 aa13.06□□□□□ -0.32
GARNL3-217ENST00000481875 METAP2P50579 478 aaKnown RBP eCLIP13.06□□□□□ -0.32
GARNL3-217ENST00000481875 USP11P51784 963 aa13.06□□□□□ -0.32
GARNL3-217ENST00000481875 PLCB3Q01970 1234 aa13.06□□□□□ -0.32
GARNL3-217ENST00000481875 STK3Q13188 491 aa13.06□□□□□ -0.32
GARNL3-217ENST00000481875 KCNC3Q14003 757 aa13.06□□□□□ -0.32
GARNL3-217ENST00000481875 NTRK3Q16288 839 aa13.06□□□□□ -0.32
GARNL3-217ENST00000481875 TMEM266Q2M3C6 531 aa13.06□□□□□ -0.32
GARNL3-217ENST00000481875 JAKMIP3Q5VZ66 844 aa13.06□□□□□ -0.32
GARNL3-217ENST00000481875 EP400NLQ6ZTU2 488 aa13.06□□□□□ -0.32
GARNL3-217ENST00000481875 FAM177A1Q8N128 213 aaPredicted RBP13.06□□□□□ -0.32
GARNL3-217ENST00000481875 RSPH1Q8WYR4 309 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms