RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 TUBE1Q9UJT0 475 aa23.06■■□□□ 1.28
VPS16-207ENST00000481812 PCDHA2Q9Y5H9 948 aa23.06■■□□□ 1.28
VPS16-207ENST00000481812 RPLP2P05387 115 aaKnown RBP23.05■■□□□ 1.28
VPS16-207ENST00000481812 CYP11B2P19099 503 aa23.05■■□□□ 1.28
VPS16-207ENST00000481812 POLGP54098 1239 aaPredicted RBP23.05■■□□□ 1.28
VPS16-207ENST00000481812 IGBP1P78318 339 aa23.05■■□□□ 1.28
VPS16-207ENST00000481812 HIC1Q14526 733 aa23.05■■□□□ 1.28
VPS16-207ENST00000481812 LONRF3Q496Y0 759 aa23.05■■□□□ 1.28
VPS16-207ENST00000481812 TPRNQ4KMQ1 711 aa23.05■■□□□ 1.28
VPS16-207ENST00000481812 KRBA2Q6ZNG9 492 aa23.05■■□□□ 1.28
VPS16-207ENST00000481812 C1orf186Q6ZWK4 172 aa23.05■■□□□ 1.28
VPS16-207ENST00000481812 RETREG2Q8NC44 543 aa23.05■■□□□ 1.28
VPS16-207ENST00000481812 MCPH1Q8NEM0 835 aa23.05■■□□□ 1.28
VPS16-207ENST00000481812 TRAPPC12Q8WVT3 735 aa23.05■■□□□ 1.28
VPS16-207ENST00000481812 SH2D3AQ9BRG2 576 aa23.05■■□□□ 1.28
VPS16-207ENST00000481812 SERTAD1Q9UHV2 236 aa23.05■■□□□ 1.28
VPS16-207ENST00000481812 SMIM35A0A1B0GVV1 85 aa23.04■■□□□ 1.28
VPS16-207ENST00000481812 CCDC85CA6NKD9 419 aa23.04■■□□□ 1.28
VPS16-207ENST00000481812 NR1I2O75469 434 aa23.04■■□□□ 1.28
VPS16-207ENST00000481812 GUCY2CP25092 1073 aa23.04■■□□□ 1.28
VPS16-207ENST00000481812 TAF2Q6P1X5 1199 aa23.04■■□□□ 1.28
VPS16-207ENST00000481812 CNNM4Q6P4Q7 775 aa23.04■■□□□ 1.28
VPS16-207ENST00000481812 LINC01465Q8N7H1 131 aa23.04■■□□□ 1.28
VPS16-207ENST00000481812 ATP6V0A4Q9HBG4 840 aa23.04■■□□□ 1.28
VPS16-207ENST00000481812 DNAH12Q6ZR08 3092 aa23.04■■□□□ 1.28
VPS16-207ENST00000481812 TREHO43280 583 aa23.03■■□□□ 1.28
VPS16-207ENST00000481812 MBD3O95983 291 aa23.03■■□□□ 1.28
VPS16-207ENST00000481812 CD4P01730 458 aa23.03■■□□□ 1.28
VPS16-207ENST00000481812 SSBP05455 408 aaKnown RBP eCLIP23.03■■□□□ 1.28
VPS16-207ENST00000481812 MYL1P05976 194 aa23.03■■□□□ 1.28
VPS16-207ENST00000481812 PTK7Q13308 1070 aa23.03■■□□□ 1.28
VPS16-207ENST00000481812 EMC2Q15006 297 aa23.03■■□□□ 1.28
VPS16-207ENST00000481812 PTGISQ16647 500 aa23.03■■□□□ 1.28
VPS16-207ENST00000481812 SH3RF1Q7Z6J0 888 aa23.03■■□□□ 1.28
VPS16-207ENST00000481812 RPAINQ86UA6 219 aa23.03■■□□□ 1.28
VPS16-207ENST00000481812 SERINC5Q86VE9 423 aa23.03■■□□□ 1.28
VPS16-207ENST00000481812 GPBP1Q86WP2 473 aa23.03■■□□□ 1.28
VPS16-207ENST00000481812 FAM126BQ8IXS8 530 aa23.03■■□□□ 1.28
VPS16-207ENST00000481812 CNNM3Q8NE01 707 aa23.03■■□□□ 1.28
VPS16-207ENST00000481812 MTRQ99707 1265 aa23.03■■□□□ 1.28
VPS16-207ENST00000481812 XPNPEP1Q9NQW7 623 aa23.03■■□□□ 1.28
VPS16-207ENST00000481812 BMP2KQ9NSY1 1161 aaPredicted RBP23.03■■□□□ 1.28
VPS16-207ENST00000481812 MYH11P35749 1972 aa23.03■■□□□ 1.28
VPS16-207ENST00000481812 TLR3O15455 904 aaKnown RBP23.02■■□□□ 1.28
VPS16-207ENST00000481812 USO1O60763 962 aaKnown RBP23.02■■□□□ 1.28
VPS16-207ENST00000481812 KINO60870 393 aaKnown RBP23.02■■□□□ 1.28
VPS16-207ENST00000481812 TMOD1P28289 359 aa23.02■■□□□ 1.28
VPS16-207ENST00000481812 DNM2P50570 870 aa23.02■■□□□ 1.28
VPS16-207ENST00000481812 ZNF200P98182 395 aaPredicted RBP23.02■■□□□ 1.28
VPS16-207ENST00000481812 ARSHQ5FYA8 562 aa23.02■■□□□ 1.28
VPS16-207ENST00000481812 IER5Q5VY09 327 aa23.02■■□□□ 1.28
VPS16-207ENST00000481812 EFCAB12Q6NXP0 572 aa23.02■■□□□ 1.28
VPS16-207ENST00000481812 ZNF710Q8N1W2 664 aa23.02■■□□□ 1.28
VPS16-207ENST00000481812 PPP1R13LQ8WUF5 828 aa23.02■■□□□ 1.28
VPS16-207ENST00000481812 TCP11Q8WWU5 503 aa23.02■■□□□ 1.28
VPS16-207ENST00000481812 CTAGE1Q96RT6 745 aa23.02■■□□□ 1.28
VPS16-207ENST00000481812 RUSC1Q9BVN2 902 aa23.02■■□□□ 1.28
VPS16-207ENST00000481812 DACT1Q9NYF0 836 aa23.02■■□□□ 1.28
VPS16-207ENST00000481812 DCDC2CA8MYV0 355 aa23.01■■□□□ 1.27
VPS16-207ENST00000481812 B4GALT4O60513 344 aa23.01■■□□□ 1.27
VPS16-207ENST00000481812 CYP2C9P11712 490 aa23.01■■□□□ 1.27
VPS16-207ENST00000481812 ATN1P54259 1190 aaPredicted RBP23.01■■□□□ 1.27
VPS16-207ENST00000481812 SOX10P56693 466 aa23.01■■□□□ 1.27
VPS16-207ENST00000481812 DHX8Q14562 1220 aaKnown RBP23.01■■□□□ 1.27
VPS16-207ENST00000481812 NME8Q8N427 588 aa23.01■■□□□ 1.27
VPS16-207ENST00000481812 PAGE5Q96GU1 130 aa23.01■■□□□ 1.27
VPS16-207ENST00000481812 C7orf25Q9BPX7 421 aa23.01■■□□□ 1.27
VPS16-207ENST00000481812 ODF2LQ9ULJ1 636 aa23.01■■□□□ 1.27
VPS16-207ENST00000481812 MYMKA6NI61 221 aa23■■□□□ 1.27
VPS16-207ENST00000481812 CDC42EP1Q00587 391 aa23■■□□□ 1.27
VPS16-207ENST00000481812 LRRC26Q2I0M4 334 aa23■■□□□ 1.27
VPS16-207ENST00000481812 DDX12PQ92771 950 aa23■■□□□ 1.27
VPS16-207ENST00000481812 KIFAP3Q92845 792 aa23■■□□□ 1.27
VPS16-207ENST00000481812 TRIM9Q9C026 710 aa23■■□□□ 1.27
VPS16-207ENST00000481812 TRMT13Q9NUP7 481 aaKnown RBP23■■□□□ 1.27
VPS16-207ENST00000481812 HOOK1Q9UJC3 728 aaKnown RBP23■■□□□ 1.27
VPS16-207ENST00000481812 NOD1Q9Y239 953 aa23■■□□□ 1.27
VPS16-207ENST00000481812 ASAP2O43150 1006 aa22.99■■□□□ 1.27
VPS16-207ENST00000481812 CAND2O75155 1236 aa22.99■■□□□ 1.27
VPS16-207ENST00000481812 ARL2P36404 184 aa22.99■■□□□ 1.27
VPS16-207ENST00000481812 RTP1P59025 263 aa22.99■■□□□ 1.27
VPS16-207ENST00000481812 TLE2Q04725 743 aa22.99■■□□□ 1.27
VPS16-207ENST00000481812 RBL2Q08999 1139 aa22.99■■□□□ 1.27
VPS16-207ENST00000481812 MKRN4PQ13434 485 aaPredicted RBP22.99■■□□□ 1.27
VPS16-207ENST00000481812 GIT2Q14161 759 aa22.99■■□□□ 1.27
VPS16-207ENST00000481812 TRIM60Q495X7 471 aa22.99■■□□□ 1.27
VPS16-207ENST00000481812 KIAA0319LQ8IZA0 1049 aa22.99■■□□□ 1.27
VPS16-207ENST00000481812 METTL13Q8N6R0 699 aa22.99■■□□□ 1.27
VPS16-207ENST00000481812 GPT2Q8TD30 523 aa22.99■■□□□ 1.27
VPS16-207ENST00000481812 DNAJC19Q96DA6 116 aa22.99■■□□□ 1.27
VPS16-207ENST00000481812 DRC1Q96MC2 740 aa22.99■■□□□ 1.27
VPS16-207ENST00000481812 TRPV6Q9H1D0 765 aa22.99■■□□□ 1.27
VPS16-207ENST00000481812 SUGCTQ9HAC7 445 aa22.99■■□□□ 1.27
VPS16-207ENST00000481812 C17orf75Q9HAS0 396 aa22.99■■□□□ 1.27
VPS16-207ENST00000481812 GTPBP6O43824 516 aaPredicted RBP22.98■■□□□ 1.27
VPS16-207ENST00000481812 MDM2Q00987 491 aaPredicted RBP22.98■■□□□ 1.27
VPS16-207ENST00000481812 MAPK7Q13164 816 aa22.98■■□□□ 1.27
VPS16-207ENST00000481812 MXD4Q14582 209 aaPredicted RBP22.98■■□□□ 1.27
VPS16-207ENST00000481812 RUFY4Q6ZNE9 571 aa22.98■■□□□ 1.27
VPS16-207ENST00000481812 RSPH3Q86UC2 560 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms