RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 RRP15Q9Y3B9 282 aaKnown RBP10.19□□□□□ -0.78
GARNL3-216ENST00000481242 QRICH2Q9H0J4 1663 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 TRAPPC3O43617 180 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 CETPP11597 493 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 AKR1B1P15121 316 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 CDC25AP30304 524 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 HMGCS2P54868 508 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 YWHAGP61981 247 aaKnown RBP eCLIP10.19□□□□□ -0.78
GARNL3-216ENST00000481242 CEP57Q86XR8 500 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 LMNTD2Q8IXW0 634 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 GUF1Q8N442 669 aaKnown RBP10.19□□□□□ -0.78
GARNL3-216ENST00000481242 KLHL14Q9P2G3 628 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 SLC9A2Q9UBY0 812 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 STAP1Q9ULZ2 295 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 PFASO15067 1338 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 TECPR2O15040 1411 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 NEXMIFQ5QGS0 1516 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 ABCA6Q8N139 1617 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 A0A0G2JLW4 131 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 SGK1O00141 431 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 GFPT2O94808 682 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 ECEL1O95672 775 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 KRT1P04264 644 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 RECQLP46063 649 aaPredicted RBP10.18□□□□□ -0.78
GARNL3-216ENST00000481242 VPS41P49754 854 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 ARPP19P56211 112 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 OSTNP61366 133 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 TOB2Q14106 344 aaPredicted RBP10.18□□□□□ -0.78
GARNL3-216ENST00000481242 NAALADL2Q58DX5 795 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 CEP85LQ5SZL2 805 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 SARM1Q6SZW1 724 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 CCDC13Q8IYE1 715 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 ANKRD13AQ8IZ07 590 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 RILPQ96NA2 401 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 TRIM56Q9BRZ2 755 aaKnown RBP10.18□□□□□ -0.78
GARNL3-216ENST00000481242 VCPKMTQ9H867 229 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 GABBR1Q9UBS5 961 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 CLTCQ00610 1675 aaKnown RBP10.18□□□□□ -0.78
GARNL3-216ENST00000481242 LRRC7Q96NW7 1537 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 ZNF543Q08ER8 600 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 SREBF2Q12772 1141 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 XKR3Q5GH77 459 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 KAZNQ674X7 775 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 CYB5R4Q7L1T6 521 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 FBXO33Q7Z6M2 555 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 GPIHBP1Q8IV16 184 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 RYBPQ8N488 228 aaPredicted RBP10.18□□□□□ -0.78
GARNL3-216ENST00000481242 KCND2Q9NZV8 630 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 ZNF70Q9UC06 446 aaPredicted RBP10.18□□□□□ -0.78
GARNL3-216ENST00000481242 SETD1BQ9UPS6 1966 aaKnown RBP10.18□□□□□ -0.78
GARNL3-216ENST00000481242 CTNND1O60716 968 aaKnown RBP10.18□□□□□ -0.78
GARNL3-216ENST00000481242 NR3C1P04150 777 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 OAS2P29728 719 aaKnown RBP10.18□□□□□ -0.78
GARNL3-216ENST00000481242 ZNF131P52739 623 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 SLMAPQ14BN4 828 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 ZNF699Q32M78 642 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 NBPF20Q3BBV1 942 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 ALKBH5Q6P6C2 394 aaKnown RBP10.18□□□□□ -0.78
GARNL3-216ENST00000481242 LRRC31Q6UY01 552 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 TRIM72Q6ZMU5 477 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 LINC00116Q8NCU8 138 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 CHST13Q8NET6 341 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 AIFM3Q96NN9 605 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 ASAP2O43150 1006 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 DGAT1O75907 488 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 EPHB1P54762 984 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 SEPT6Q14141 434 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 KNOP1Q1ED39 458 aaKnown RBP10.18□□□□□ -0.78
GARNL3-216ENST00000481242 TCP11X2Q5H9J9 407 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 SWSAP1Q6NVH7 229 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 C4orf50Q6ZRC1 276 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 DNAAF3Q8N9W5 541 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 KCTD6Q8NC69 237 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.18□□□□□ -0.78
GARNL3-216ENST00000481242 CALN1Q9BXU9 219 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 EDEM3Q9BZQ6 932 aa10.18□□□□□ -0.78
GARNL3-216ENST00000481242 FLT1P17948 1338 aa10.17□□□□□ -0.78
GARNL3-216ENST00000481242 CD58P19256 250 aa10.17□□□□□ -0.78
GARNL3-216ENST00000481242 ECE1P42892 770 aa10.17□□□□□ -0.78
GARNL3-216ENST00000481242 GPC3P51654 580 aa10.17□□□□□ -0.78
GARNL3-216ENST00000481242 MXD4Q14582 209 aaPredicted RBP10.17□□□□□ -0.78
GARNL3-216ENST00000481242 VSTM4Q8IW00 320 aa10.17□□□□□ -0.78
GARNL3-216ENST00000481242 SAMD3Q8N6K7 520 aa10.17□□□□□ -0.78
GARNL3-216ENST00000481242 FAM133AQ8N9E0 248 aa10.17□□□□□ -0.78
GARNL3-216ENST00000481242 PIGOQ8TEQ8 1089 aa10.17□□□□□ -0.78
GARNL3-216ENST00000481242 DHX38Q92620 1227 aaKnown RBP10.17□□□□□ -0.78
GARNL3-216ENST00000481242 RBM41Q96IZ5 413 aaKnown RBP10.17□□□□□ -0.78
GARNL3-216ENST00000481242 SCYL1Q96KG9 808 aa10.17□□□□□ -0.78
GARNL3-216ENST00000481242 TTC25Q96NG3 672 aa10.17□□□□□ -0.78
GARNL3-216ENST00000481242 NUF2Q9BZD4 464 aa10.17□□□□□ -0.78
GARNL3-216ENST00000481242 SMARCAD1Q9H4L7 1026 aa10.17□□□□□ -0.78
GARNL3-216ENST00000481242 JPH1Q9HDC5 661 aaPredicted RBP10.17□□□□□ -0.78
GARNL3-216ENST00000481242 PYCARDQ9ULZ3 195 aa10.17□□□□□ -0.78
GARNL3-216ENST00000481242 PDS5AQ29RF7 1337 aaKnown RBP10.17□□□□□ -0.78
GARNL3-216ENST00000481242 LUC7L3O95232 432 aaKnown RBP10.17□□□□□ -0.78
GARNL3-216ENST00000481242 CPP00450 1065 aa10.17□□□□□ -0.78
GARNL3-216ENST00000481242 ACTN1P12814 892 aa10.17□□□□□ -0.78
GARNL3-216ENST00000481242 STAT5BP51692 787 aa10.17□□□□□ -0.78
GARNL3-216ENST00000481242 TGFB2P61812 414 aa10.17□□□□□ -0.78
GARNL3-216ENST00000481242 NUDT18Q6ZVK8 323 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms