RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 KCNQ1P51787 676 aa7.33□□□□□ -1.24
CALD1-219ENST00000480638 TERF2Q15554 542 aa7.33□□□□□ -1.24
CALD1-219ENST00000480638 CT47A1Q5JQC4 288 aaPredicted RBP7.33□□□□□ -1.24
CALD1-219ENST00000480638 ZFYVE27Q5T4F4 411 aa7.33□□□□□ -1.24
CALD1-219ENST00000480638 GRAMD4Q6IC98 578 aa7.33□□□□□ -1.24
CALD1-219ENST00000480638 FERMT3Q86UX7 667 aa7.33□□□□□ -1.24
CALD1-219ENST00000480638 IFNL2Q8IZJ0 200 aa7.33□□□□□ -1.24
CALD1-219ENST00000480638 CARD11Q9BXL7 1154 aa7.33□□□□□ -1.24
CALD1-219ENST00000480638 Q9UFV3 132 aa7.33□□□□□ -1.24
CALD1-219ENST00000480638 CDC42EP3Q9UKI2 254 aa7.33□□□□□ -1.24
CALD1-219ENST00000480638 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.33□□□□□ -1.24
CALD1-219ENST00000480638 APOBEC2Q9Y235 224 aaKnown RBP7.33□□□□□ -1.24
CALD1-219ENST00000480638 PTPN22Q9Y2R2 807 aa7.33□□□□□ -1.24
CALD1-219ENST00000480638 PRICKLE3O43900 615 aaPredicted RBP7.32□□□□□ -1.24
CALD1-219ENST00000480638 ID4P47928 161 aa7.32□□□□□ -1.24
CALD1-219ENST00000480638 MAP3K12Q12852 859 aa7.32□□□□□ -1.24
CALD1-219ENST00000480638 USP10Q14694 798 aaKnown RBP7.32□□□□□ -1.24
CALD1-219ENST00000480638 NFIXQ14938 502 aa7.32□□□□□ -1.24
CALD1-219ENST00000480638 EIF4HQ15056 248 aaKnown RBP7.32□□□□□ -1.24
CALD1-219ENST00000480638 ATP13A4Q4VNC1 1196 aa7.32□□□□□ -1.24
CALD1-219ENST00000480638 PLEKHH3Q7Z736 793 aa7.32□□□□□ -1.24
CALD1-219ENST00000480638 MS4A5Q9H3V2 200 aa7.32□□□□□ -1.24
CALD1-219ENST00000480638 POFUT1Q9H488 388 aa7.32□□□□□ -1.24
CALD1-219ENST00000480638 LCHNA4D1U4 455 aa7.31□□□□□ -1.24
CALD1-219ENST00000480638 ZEB2O60315 1214 aa7.31□□□□□ -1.24
CALD1-219ENST00000480638 LSP1P33241 339 aa7.31□□□□□ -1.24
CALD1-219ENST00000480638 RRADP55042 308 aa7.31□□□□□ -1.24
CALD1-219ENST00000480638 CTSWP56202 376 aa7.31□□□□□ -1.24
CALD1-219ENST00000480638 DDB1Q16531 1140 aa7.31□□□□□ -1.24
CALD1-219ENST00000480638 UBXN11Q5T124 520 aa7.31□□□□□ -1.24
CALD1-219ENST00000480638 ZNF662Q6ZS27 426 aa7.31□□□□□ -1.24
CALD1-219ENST00000480638 KANSL1Q7Z3B3 1105 aa7.31□□□□□ -1.24
CALD1-219ENST00000480638 BCL6BQ8N143 479 aaPredicted RBP7.31□□□□□ -1.24
CALD1-219ENST00000480638 ZNF610Q8N9Z0 462 aa7.31□□□□□ -1.24
CALD1-219ENST00000480638 OR5AN1Q8NGI8 311 aa7.31□□□□□ -1.24
CALD1-219ENST00000480638 SLC5A5Q92911 643 aa7.31□□□□□ -1.24
CALD1-219ENST00000480638 MYL10Q9BUA6 226 aa7.31□□□□□ -1.24
CALD1-219ENST00000480638 SEMA4AQ9H3S1 761 aa7.31□□□□□ -1.24
CALD1-219ENST00000480638 SPC25Q9HBM1 224 aa7.31□□□□□ -1.24
CALD1-219ENST00000480638 USP36Q9P275 1121 aaKnown RBP7.31□□□□□ -1.24
CALD1-219ENST00000480638 MSRAQ9UJ68 235 aa7.31□□□□□ -1.24
CALD1-219ENST00000480638 DNAJC6O75061 913 aa7.3□□□□□ -1.24
CALD1-219ENST00000480638 PRPF6O94906 941 aaKnown RBP7.3□□□□□ -1.24
CALD1-219ENST00000480638 APOL3O95236 402 aa7.3□□□□□ -1.24
CALD1-219ENST00000480638 ADCY2Q08462 1091 aa7.3□□□□□ -1.24
CALD1-219ENST00000480638 NOLC1Q14978 699 aaKnown RBP eCLIP7.3□□□□□ -1.24
CALD1-219ENST00000480638 ZNF827Q17R98 1081 aa7.3□□□□□ -1.24
CALD1-219ENST00000480638 RNF187Q5TA31 235 aaPredicted RBP7.3□□□□□ -1.24
CALD1-219ENST00000480638 BROXQ5VW32 411 aa7.3□□□□□ -1.24
CALD1-219ENST00000480638 KIAA1841Q6NSI8 718 aa7.3□□□□□ -1.24
CALD1-219ENST00000480638 TIGD7Q6NT04 549 aaPredicted RBP7.3□□□□□ -1.24
CALD1-219ENST00000480638 FILIP1Q7Z7B0 1213 aa7.3□□□□□ -1.24
CALD1-219ENST00000480638 FAM126AQ9BYI3 521 aaPredicted RBP7.3□□□□□ -1.24
CALD1-219ENST00000480638 SLC4A7Q9Y6M7 1214 aa7.3□□□□□ -1.24
CALD1-219ENST00000480638 ELL2O00472 640 aaPredicted RBP7.29□□□□□ -1.24
CALD1-219ENST00000480638 BRINP1O60477 761 aa7.29□□□□□ -1.24
CALD1-219ENST00000480638 B4GALT4O60513 344 aa7.29□□□□□ -1.24
CALD1-219ENST00000480638 EYA4O95677 639 aa7.29□□□□□ -1.24
CALD1-219ENST00000480638 POU3F3P20264 500 aaPredicted RBP7.29□□□□□ -1.24
CALD1-219ENST00000480638 STAT5BP51692 787 aa7.29□□□□□ -1.24
CALD1-219ENST00000480638 BCAR1P56945 870 aa7.29□□□□□ -1.24
CALD1-219ENST00000480638 NFKB2Q00653 900 aa7.29□□□□□ -1.24
CALD1-219ENST00000480638 SURF1Q15526 300 aa7.29□□□□□ -1.24
CALD1-219ENST00000480638 TRIM68Q6AZZ1 485 aa7.29□□□□□ -1.24
CALD1-219ENST00000480638 LARP4Q71RC2 724 aaKnown RBP eCLIP7.29□□□□□ -1.24
CALD1-219ENST00000480638 RPGRQ92834 1020 aaKnown RBP7.29□□□□□ -1.24
CALD1-219ENST00000480638 ZNF496Q96IT1 587 aaPredicted RBP7.29□□□□□ -1.24
CALD1-219ENST00000480638 KIAA1683Q9H0B3 1180 aa7.29□□□□□ -1.24
CALD1-219ENST00000480638 LAMTOR5O43504 91 aa7.28□□□□□ -1.24
CALD1-219ENST00000480638 ULK1O75385 1050 aa7.28□□□□□ -1.24
CALD1-219ENST00000480638 PLATP00750 562 aa7.28□□□□□ -1.24
CALD1-219ENST00000480638 STAT4Q14765 748 aa7.28□□□□□ -1.24
CALD1-219ENST00000480638 DGKDQ16760 1214 aa7.28□□□□□ -1.24
CALD1-219ENST00000480638 ZBTB41Q5SVQ8 909 aa7.28□□□□□ -1.24
CALD1-219ENST00000480638 UNQ6494/PRO21346Q6UXR6 183 aa7.28□□□□□ -1.24
CALD1-219ENST00000480638 ARHGEF18Q6ZSZ5 1173 aa7.28□□□□□ -1.24
CALD1-219ENST00000480638 ESPNLQ6ZVH7 1005 aa7.28□□□□□ -1.24
CALD1-219ENST00000480638 RTKN2Q8IZC4 609 aa7.28□□□□□ -1.24
CALD1-219ENST00000480638 PITHD1Q9GZP4 211 aaPredicted RBP7.28□□□□□ -1.24
CALD1-219ENST00000480638 KCMF1Q9P0J7 381 aa7.28□□□□□ -1.24
CALD1-219ENST00000480638 MAGEL2Q9UJ55 1249 aa7.28□□□□□ -1.24
CALD1-219ENST00000480638 KDM1AO60341 852 aa7.27□□□□□ -1.25
CALD1-219ENST00000480638 CNOT4O95628 575 aaKnown RBP7.27□□□□□ -1.25
CALD1-219ENST00000480638 CPEP16870 476 aa7.27□□□□□ -1.25
CALD1-219ENST00000480638 MEOX1P50221 254 aa7.27□□□□□ -1.25
CALD1-219ENST00000480638 EPHB4P54760 987 aa7.27□□□□□ -1.25
CALD1-219ENST00000480638 PPP2CBP62714 309 aa7.27□□□□□ -1.25
CALD1-219ENST00000480638 PPP2CAP67775 309 aa7.27□□□□□ -1.25
CALD1-219ENST00000480638 PCOLCEQ15113 449 aa7.27□□□□□ -1.25
CALD1-219ENST00000480638 ZNF568Q3ZCX4 644 aa7.27□□□□□ -1.25
CALD1-219ENST00000480638 TBC1D10BQ4KMP7 808 aaPredicted RBP7.27□□□□□ -1.25
CALD1-219ENST00000480638 ZMAT1Q5H9K5 638 aa7.27□□□□□ -1.25
CALD1-219ENST00000480638 LCE4AQ5TA78 99 aa7.27□□□□□ -1.25
CALD1-219ENST00000480638 LILRA6Q6PI73 481 aa7.27□□□□□ -1.25
CALD1-219ENST00000480638 FRMD7Q6ZUT3 714 aa7.27□□□□□ -1.25
CALD1-219ENST00000480638 HDGFL2Q7Z4V5 671 aaPredicted RBP7.27□□□□□ -1.25
CALD1-219ENST00000480638 BMP8AQ7Z5Y6 402 aa7.27□□□□□ -1.25
CALD1-219ENST00000480638 CLRN3Q8NCR9 226 aa7.27□□□□□ -1.25
CALD1-219ENST00000480638 CXorf38Q8TB03 319 aa7.27□□□□□ -1.25
CALD1-219ENST00000480638 HAPLN2Q9GZV7 340 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms