RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 FAM89AQ96GI7 184 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 GANQ9H2C0 597 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 GREM2Q9H772 168 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 CTTNBP2NLQ9P2B4 639 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 KLHL14Q9P2G3 628 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 PARP2Q9UGN5 583 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 RASAL2Q9UJF2 1139 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 NAGPAQ9UK23 515 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 PCDHA6Q9UN73 950 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 PCDHA8Q9Y5H6 950 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 PCDH11XQ9BZA7 1347 aa11.53□□□□□ -0.56
SIK3-210ENST00000480468 KIF13BQ9NQT8 1826 aa11.53□□□□□ -0.56
SIK3-210ENST00000480468 RASGRF2O14827 1237 aa11.53□□□□□ -0.56
SIK3-210ENST00000480468 KIAA0391O15091 583 aaKnown RBP11.53□□□□□ -0.56
SIK3-210ENST00000480468 EYA4O95677 639 aa11.53□□□□□ -0.56
SIK3-210ENST00000480468 LMNAP02545 664 aaKnown RBP11.53□□□□□ -0.56
SIK3-210ENST00000480468 SLC5A1P13866 664 aa11.53□□□□□ -0.56
SIK3-210ENST00000480468 HLFQ16534 295 aa11.53□□□□□ -0.56
SIK3-210ENST00000480468 KIAA1755Q5JYT7 1200 aa11.53□□□□□ -0.56
SIK3-210ENST00000480468 TRIM59Q8IWR1 403 aa11.53□□□□□ -0.56
SIK3-210ENST00000480468 DYDC1Q8WWB3 177 aa11.53□□□□□ -0.56
SIK3-210ENST00000480468 CKAP2Q8WWK9 683 aa11.53□□□□□ -0.56
SIK3-210ENST00000480468 HPS3Q969F9 1004 aa11.53□□□□□ -0.56
SIK3-210ENST00000480468 CALML4Q96GE6 196 aa11.53□□□□□ -0.56
SIK3-210ENST00000480468 PIDD1Q9HB75 910 aa11.53□□□□□ -0.56
SIK3-210ENST00000480468 ETNK1Q9HBU6 452 aa11.53□□□□□ -0.56
SIK3-210ENST00000480468 KCPQ6ZWJ8 1503 aa11.53□□□□□ -0.56
SIK3-210ENST00000480468 POTEFA5A3E0 1075 aa11.52□□□□□ -0.56
SIK3-210ENST00000480468 COQ9O75208 318 aa11.52□□□□□ -0.56
SIK3-210ENST00000480468 PYGLP06737 847 aa11.52□□□□□ -0.56
SIK3-210ENST00000480468 POTEIP0CG38 1075 aa11.52□□□□□ -0.56
SIK3-210ENST00000480468 POTEJP0CG39 1038 aa11.52□□□□□ -0.56
SIK3-210ENST00000480468 IMPDH2P12268 514 aa11.52□□□□□ -0.56
SIK3-210ENST00000480468 VEGFAP15692 232 aaPredicted RBP11.52□□□□□ -0.56
SIK3-210ENST00000480468 PRKCIP41743 596 aa11.52□□□□□ -0.56
SIK3-210ENST00000480468 CTSWP56202 376 aa11.52□□□□□ -0.56
SIK3-210ENST00000480468 PTK2Q05397 1052 aa11.52□□□□□ -0.56
SIK3-210ENST00000480468 SF3A3Q12874 501 aaKnown RBP eCLIP11.52□□□□□ -0.56
SIK3-210ENST00000480468 ORC2Q13416 577 aaPredicted RBP11.52□□□□□ -0.56
SIK3-210ENST00000480468 LRRC23Q53EV4 343 aaPredicted RBP11.52□□□□□ -0.56
SIK3-210ENST00000480468 POTEEQ6S8J3 1075 aa11.52□□□□□ -0.56
SIK3-210ENST00000480468 IRF2BP2Q7Z5L9 587 aa11.52□□□□□ -0.56
SIK3-210ENST00000480468 RUNDC3BQ96NL0 473 aa11.52□□□□□ -0.56
SIK3-210ENST00000480468 RPS6KC1Q96S38 1066 aa11.52□□□□□ -0.56
SIK3-210ENST00000480468 LRRC27Q9C0I9 530 aa11.52□□□□□ -0.56
SIK3-210ENST00000480468 FAM192AQ9GZU8 254 aa11.52□□□□□ -0.56
SIK3-210ENST00000480468 GOPCQ9HD26 462 aa11.52□□□□□ -0.56
SIK3-210ENST00000480468 NLRP2Q9NX02 1062 aa11.52□□□□□ -0.56
SIK3-210ENST00000480468 MTRF1LQ9UGC7 380 aaKnown RBP11.52□□□□□ -0.56
SIK3-210ENST00000480468 GGT7Q9UJ14 662 aa11.52□□□□□ -0.56
SIK3-210ENST00000480468 TRIM33Q9UPN9 1127 aa11.52□□□□□ -0.56
SIK3-210ENST00000480468 THRAP3Q9Y2W1 955 aaKnown RBP11.52□□□□□ -0.56
SIK3-210ENST00000480468 RPS6KL1Q9Y6S9 549 aa11.52□□□□□ -0.56
SIK3-210ENST00000480468 MYH3P11055 1940 aa11.52□□□□□ -0.57
SIK3-210ENST00000480468 MAP3K13O43283 966 aa11.52□□□□□ -0.57
SIK3-210ENST00000480468 FGGP02679 453 aa11.52□□□□□ -0.57
SIK3-210ENST00000480468 ATP5DP30049 168 aa11.52□□□□□ -0.57
SIK3-210ENST00000480468 PSMC4P43686 418 aa11.52□□□□□ -0.57
SIK3-210ENST00000480468 INF2Q27J81 1249 aa11.52□□□□□ -0.57
SIK3-210ENST00000480468 ALKBH5Q6P6C2 394 aaKnown RBP11.52□□□□□ -0.57
SIK3-210ENST00000480468 ZNF571Q7Z3V5 609 aaPredicted RBP11.52□□□□□ -0.57
SIK3-210ENST00000480468 EXOC3L1Q86VI1 746 aa11.52□□□□□ -0.57
SIK3-210ENST00000480468 RBM12BQ8IXT5 1001 aaKnown RBP11.52□□□□□ -0.57
SIK3-210ENST00000480468 RBBP8NLQ8NC74 664 aaPredicted RBP11.52□□□□□ -0.57
SIK3-210ENST00000480468 FBXO41Q8TF61 875 aa11.52□□□□□ -0.57
SIK3-210ENST00000480468 MMTAG2Q9BU76 263 aaKnown RBP11.52□□□□□ -0.57
SIK3-210ENST00000480468 BRIP1Q9BX63 1249 aa11.52□□□□□ -0.57
SIK3-210ENST00000480468 CARD9Q9H257 536 aa11.52□□□□□ -0.57
SIK3-210ENST00000480468 GOLPH3Q9H4A6 298 aa11.52□□□□□ -0.57
SIK3-210ENST00000480468 USP40Q9NVE5 1235 aa11.52□□□□□ -0.57
SIK3-210ENST00000480468 LMCD1Q9NZU5 365 aa11.52□□□□□ -0.57
SIK3-210ENST00000480468 ZMYND8Q9ULU4 1186 aaPredicted RBP11.52□□□□□ -0.57
SIK3-210ENST00000480468 LRCH1Q9Y2L9 728 aa11.52□□□□□ -0.57
SIK3-210ENST00000480468 CASZ1Q86V15 1759 aa11.52□□□□□ -0.57
SIK3-210ENST00000480468 BAZ2BQ9UIF8 2168 aaKnown RBP11.52□□□□□ -0.57
SIK3-210ENST00000480468 MYMKA6NI61 221 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 RIPK2O43353 540 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 H2AFZP0C0S5 128 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 RARGP13631 454 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 PTDSS1P48651 473 aaKnown RBP11.51□□□□□ -0.57
SIK3-210ENST00000480468 GNAQP50148 359 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 PLTPP55058 493 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 MAPK7Q13164 816 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 SPDYAQ5MJ70 313 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 H2AFVQ71UI9 128 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 JAMLQ86YT9 394 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 OSCARQ8IYS5 282 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 ANKLE1Q8NAG6 615 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 FBXO25Q8TCJ0 367 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 EPS8L3Q8TE67 593 aaKnown RBP11.51□□□□□ -0.57
SIK3-210ENST00000480468 RMDN2Q96LZ7 410 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 NUDCD1Q96RS6 583 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 TRIM31Q9BZY9 425 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 DMAP1Q9NPF5 467 aaPredicted RBP11.51□□□□□ -0.57
SIK3-210ENST00000480468 BLOC1S4Q9NUP1 217 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 GRHL1Q9NZI5 618 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 SCOCQ9UIL1 159 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 AMFRQ9UKV5 643 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.51□□□□□ -0.57
SIK3-210ENST00000480468 PAPPAQ13219 1627 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms