RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 DGAT1O75907 488 aa12.4□□□□□ -0.42
APTX-223ENST00000479656 PRPF6O94906 941 aaKnown RBP12.4□□□□□ -0.42
APTX-223ENST00000479656 GCNT3O95395 438 aa12.4□□□□□ -0.42
APTX-223ENST00000479656 ZNF18P17022 549 aa12.4□□□□□ -0.42
APTX-223ENST00000479656 SOX10P56693 466 aa12.4□□□□□ -0.42
APTX-223ENST00000479656 IRF5Q13568 498 aa12.4□□□□□ -0.42
APTX-223ENST00000479656 PLCB4Q15147 1175 aa12.4□□□□□ -0.42
APTX-223ENST00000479656 EPM2AIP1Q7L775 607 aaPredicted RBP12.4□□□□□ -0.42
APTX-223ENST00000479656 ZNF720Q7Z2F6 126 aa12.4□□□□□ -0.42
APTX-223ENST00000479656 FAM178BQ8IXR5 827 aa12.4□□□□□ -0.42
APTX-223ENST00000479656 TRIB2Q92519 343 aa12.4□□□□□ -0.42
APTX-223ENST00000479656 FIZ1Q96SL8 496 aa12.4□□□□□ -0.42
APTX-223ENST00000479656 CEP89Q96ST8 783 aa12.4□□□□□ -0.42
APTX-223ENST00000479656 DUSP9Q99956 384 aaKnown RBP12.4□□□□□ -0.42
APTX-223ENST00000479656 TIPINQ9BVW5 301 aa12.4□□□□□ -0.42
APTX-223ENST00000479656 SRRTQ9BXP5 876 aaKnown RBP12.4□□□□□ -0.42
APTX-223ENST00000479656 RNPEPQ9H4A4 650 aa12.4□□□□□ -0.42
APTX-223ENST00000479656 LARSQ9P2J5 1176 aaKnown RBP12.4□□□□□ -0.42
APTX-223ENST00000479656 SEL1LQ9UBV2 794 aa12.4□□□□□ -0.42
APTX-223ENST00000479656 FAM184BQ9ULE4 1060 aa12.4□□□□□ -0.42
APTX-223ENST00000479656 MYH9P35579 1960 aaKnown RBP12.39□□□□□ -0.43
APTX-223ENST00000479656 PPFIA4O75335 1185 aa12.39□□□□□ -0.43
APTX-223ENST00000479656 LGALS2P05162 132 aa12.39□□□□□ -0.43
APTX-223ENST00000479656 PLS3P13797 630 aa12.39□□□□□ -0.43
APTX-223ENST00000479656 ZNF75DP51815 510 aa12.39□□□□□ -0.43
APTX-223ENST00000479656 POLGP54098 1239 aaPredicted RBP12.39□□□□□ -0.43
APTX-223ENST00000479656 FANCCQ00597 558 aa12.39□□□□□ -0.43
APTX-223ENST00000479656 CCDC173Q0VFZ6 552 aa12.39□□□□□ -0.43
APTX-223ENST00000479656 TARBP2Q15633 366 aaKnown RBP12.39□□□□□ -0.43
APTX-223ENST00000479656 ZC2HC1CQ53FD0 456 aaPredicted RBP12.39□□□□□ -0.43
APTX-223ENST00000479656 MFSD14CQ5VZR4 134 aa12.39□□□□□ -0.43
APTX-223ENST00000479656 TRPV1Q8NER1 839 aa12.39□□□□□ -0.43
APTX-223ENST00000479656 BBXQ8WY36 941 aaPredicted RBP12.39□□□□□ -0.43
APTX-223ENST00000479656 LENG1Q96BZ8 264 aaPredicted RBP12.39□□□□□ -0.43
APTX-223ENST00000479656 EEF2KMTQ96G04 330 aa12.39□□□□□ -0.43
APTX-223ENST00000479656 DRC1Q96MC2 740 aa12.39□□□□□ -0.43
APTX-223ENST00000479656 PPP1R9BQ96SB3 815 aa12.39□□□□□ -0.43
APTX-223ENST00000479656 XPNPEP1Q9NQW7 623 aa12.39□□□□□ -0.43
APTX-223ENST00000479656 KIF20AO95235 890 aa12.38□□□□□ -0.43
APTX-223ENST00000479656 SERPINC1P01008 464 aa12.38□□□□□ -0.43
APTX-223ENST00000479656 MMP3P08254 477 aa12.38□□□□□ -0.43
APTX-223ENST00000479656 HOXD13P35453 343 aa12.38□□□□□ -0.43
APTX-223ENST00000479656 SLC26A2P50443 739 aa12.38□□□□□ -0.43
APTX-223ENST00000479656 PEX3P56589 373 aa12.38□□□□□ -0.43
APTX-223ENST00000479656 IRX5P78411 483 aaPredicted RBP12.38□□□□□ -0.43
APTX-223ENST00000479656 KCNA1Q09470 495 aa12.38□□□□□ -0.43
APTX-223ENST00000479656 TRIM32Q13049 653 aa12.38□□□□□ -0.43
APTX-223ENST00000479656 CDKAL1Q5VV42 579 aa12.38□□□□□ -0.43
APTX-223ENST00000479656 CREBRFQ8IUR6 639 aa12.38□□□□□ -0.43
APTX-223ENST00000479656 KSR1Q8IVT5 923 aa12.38□□□□□ -0.43
APTX-223ENST00000479656 CSGALNACT2Q8N6G5 542 aa12.38□□□□□ -0.43
APTX-223ENST00000479656 MCPH1Q8NEM0 835 aa12.38□□□□□ -0.43
APTX-223ENST00000479656 ZNF507Q8TCN5 953 aa12.38□□□□□ -0.43
APTX-223ENST00000479656 ATP8B4Q8TF62 1192 aa12.38□□□□□ -0.43
APTX-223ENST00000479656 PDLIM2Q96JY6 352 aa12.38□□□□□ -0.43
APTX-223ENST00000479656 FAM167AQ96KS9 214 aa12.38□□□□□ -0.43
APTX-223ENST00000479656 C16orf70Q9BSU1 422 aa12.38□□□□□ -0.43
APTX-223ENST00000479656 DHX33Q9H6R0 707 aaKnown RBP12.38□□□□□ -0.43
APTX-223ENST00000479656 ATP6V0A4Q9HBG4 840 aa12.38□□□□□ -0.43
APTX-223ENST00000479656 ERAP1Q9NZ08 941 aa12.38□□□□□ -0.43
APTX-223ENST00000479656 IFNKQ9P0W0 207 aa12.38□□□□□ -0.43
APTX-223ENST00000479656 ZNF286BP0CG31 522 aa12.38□□□□□ -0.43
APTX-223ENST00000479656 HOXD10P28358 340 aa12.38□□□□□ -0.43
APTX-223ENST00000479656 EMC2Q15006 297 aa12.38□□□□□ -0.43
APTX-223ENST00000479656 KNOP1Q1ED39 458 aaKnown RBP12.38□□□□□ -0.43
APTX-223ENST00000479656 TLK2Q86UE8 772 aa12.38□□□□□ -0.43
APTX-223ENST00000479656 IRF2BP1Q8IU81 584 aa12.38□□□□□ -0.43
APTX-223ENST00000479656 KIFAP3Q92845 792 aa12.38□□□□□ -0.43
APTX-223ENST00000479656 TMEM143Q96AN5 459 aa12.38□□□□□ -0.43
APTX-223ENST00000479656 NAP1L5Q96NT1 182 aaPredicted RBP12.38□□□□□ -0.43
APTX-223ENST00000479656 XPO4Q9C0E2 1151 aaKnown RBP12.38□□□□□ -0.43
APTX-223ENST00000479656 KCTD10Q9H3F6 313 aa12.38□□□□□ -0.43
APTX-223ENST00000479656 SRRDQ9UH36 339 aa12.38□□□□□ -0.43
APTX-223ENST00000479656 TRPC6Q9Y210 931 aa12.38□□□□□ -0.43
APTX-223ENST00000479656 ZBTB42B2RXF5 422 aa12.37□□□□□ -0.43
APTX-223ENST00000479656 H3BRB1 525 aa12.37□□□□□ -0.43
APTX-223ENST00000479656 HBP1O60381 514 aa12.37□□□□□ -0.43
APTX-223ENST00000479656 ELNP15502 786 aa12.37□□□□□ -0.43
APTX-223ENST00000479656 CNGA1P29973 690 aa12.37□□□□□ -0.43
APTX-223ENST00000479656 UBASH3AP57075 661 aa12.37□□□□□ -0.43
APTX-223ENST00000479656 LRRC63Q05C16 580 aa12.37□□□□□ -0.43
APTX-223ENST00000479656 DGKDQ16760 1214 aa12.37□□□□□ -0.43
APTX-223ENST00000479656 TRAPPC12Q8WVT3 735 aa12.37□□□□□ -0.43
APTX-223ENST00000479656 SLC7A3Q8WY07 619 aa12.37□□□□□ -0.43
APTX-223ENST00000479656 BSNDQ8WZ55 320 aa12.37□□□□□ -0.43
APTX-223ENST00000479656 TSG101Q99816 390 aa12.37□□□□□ -0.43
APTX-223ENST00000479656 TUT1Q9H6E5 874 aaKnown RBP12.37□□□□□ -0.43
APTX-223ENST00000479656 PCDHB13Q9Y5F0 798 aa12.37□□□□□ -0.43
APTX-223ENST00000479656 A6NJR5 290 aa12.36□□□□□ -0.43
APTX-223ENST00000479656 CCDC169A6NNP5 214 aa12.36□□□□□ -0.43
APTX-223ENST00000479656 K7ENM7 598 aa12.36□□□□□ -0.43
APTX-223ENST00000479656 EIF3DO15371 548 aaKnown RBP eCLIP12.36□□□□□ -0.43
APTX-223ENST00000479656 SLC16A4O15374 487 aa12.36□□□□□ -0.43
APTX-223ENST00000479656 FKTNO75072 461 aa12.36□□□□□ -0.43
APTX-223ENST00000479656 MAFO75444 373 aaPredicted RBP12.36□□□□□ -0.43
APTX-223ENST00000479656 MAPTP10636 758 aaKnown RBP12.36□□□□□ -0.43
APTX-223ENST00000479656 HOXD8P13378 290 aaPredicted RBP12.36□□□□□ -0.43
APTX-223ENST00000479656 CYBAP13498 195 aa12.36□□□□□ -0.43
APTX-223ENST00000479656 AKR1A1P14550 325 aa12.36□□□□□ -0.43
APTX-223ENST00000479656 RFC5P40937 340 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms