RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 IGSF9Q9P2J2 1179 aa12.85□□□□□ -0.35
CCDC18-208ENST00000479653 ST3GAL5Q9UNP4 418 aa12.85□□□□□ -0.35
CCDC18-208ENST00000479653 NOC2LQ9Y3T9 749 aaKnown RBP12.85□□□□□ -0.35
CCDC18-208ENST00000479653 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.84□□□□□ -0.35
CCDC18-208ENST00000479653 GSTTP1A0A1W2PQM5 241 aa12.84□□□□□ -0.35
CCDC18-208ENST00000479653 KLRF2D3W0D1 207 aa12.84□□□□□ -0.35
CCDC18-208ENST00000479653 ATP9AO75110 1047 aa12.84□□□□□ -0.35
CCDC18-208ENST00000479653 PCP11498 1178 aaKnown RBP12.84□□□□□ -0.35
CCDC18-208ENST00000479653 NONOQ15233 471 aaKnown RBP eCLIP12.84□□□□□ -0.35
CCDC18-208ENST00000479653 TBC1D10CQ8IV04 446 aa12.84□□□□□ -0.35
CCDC18-208ENST00000479653 NME8Q8N427 588 aa12.84□□□□□ -0.35
CCDC18-208ENST00000479653 PI4K2BQ8TCG2 481 aa12.84□□□□□ -0.35
CCDC18-208ENST00000479653 TRAPPC12Q8WVT3 735 aa12.84□□□□□ -0.35
CCDC18-208ENST00000479653 AUTS2Q8WXX7 1259 aa12.84□□□□□ -0.35
CCDC18-208ENST00000479653 TNPO1Q92973 898 aaKnown RBP12.84□□□□□ -0.35
CCDC18-208ENST00000479653 TMEM117Q9H0C3 514 aa12.84□□□□□ -0.35
CCDC18-208ENST00000479653 PKD2L1Q9P0L9 805 aa12.84□□□□□ -0.35
CCDC18-208ENST00000479653 PCDHA2Q9Y5H9 948 aa12.84□□□□□ -0.35
CCDC18-208ENST00000479653 TTC41PQ6P2S7 1318 aa12.84□□□□□ -0.35
CCDC18-208ENST00000479653 POTEMA6NI47 508 aa12.83□□□□□ -0.36
CCDC18-208ENST00000479653 NT5C1B-RDH14C9J2C7 533 aa12.83□□□□□ -0.36
CCDC18-208ENST00000479653 GPR182O15218 404 aa12.83□□□□□ -0.36
CCDC18-208ENST00000479653 DMWDQ09019 674 aa12.83□□□□□ -0.36
CCDC18-208ENST00000479653 TRAF1Q13077 416 aa12.83□□□□□ -0.36
CCDC18-208ENST00000479653 ACAP1Q15027 740 aa12.83□□□□□ -0.36
CCDC18-208ENST00000479653 PLCB4Q15147 1175 aa12.83□□□□□ -0.36
CCDC18-208ENST00000479653 PPM1JQ5JR12 505 aa12.83□□□□□ -0.36
CCDC18-208ENST00000479653 ODR4Q5SWX8 454 aa12.83□□□□□ -0.36
CCDC18-208ENST00000479653 POTEGQ6S5H5 508 aa12.83□□□□□ -0.36
CCDC18-208ENST00000479653 GPR149Q86SP6 731 aa12.83□□□□□ -0.36
CCDC18-208ENST00000479653 RNF169Q8NCN4 708 aa12.83□□□□□ -0.36
CCDC18-208ENST00000479653 ATRIPQ8WXE1 791 aa12.83□□□□□ -0.36
CCDC18-208ENST00000479653 CASD1Q96PB1 797 aa12.83□□□□□ -0.36
CCDC18-208ENST00000479653 ZSCAN10Q96SZ4 725 aaPredicted RBP12.83□□□□□ -0.36
CCDC18-208ENST00000479653 AZI2Q9H6S1 392 aa12.83□□□□□ -0.36
CCDC18-208ENST00000479653 CDHR5Q9HBB8 845 aa12.83□□□□□ -0.36
CCDC18-208ENST00000479653 HELLSQ9NRZ9 838 aa12.83□□□□□ -0.36
CCDC18-208ENST00000479653 DLGAP2Q9P1A6 1054 aa12.83□□□□□ -0.36
CCDC18-208ENST00000479653 NEDD4P46934 1319 aa12.83□□□□□ -0.36
CCDC18-208ENST00000479653 KDM3AQ9Y4C1 1321 aa12.83□□□□□ -0.36
CCDC18-208ENST00000479653 SMIM35A0A1B0GVV1 85 aa12.82□□□□□ -0.36
CCDC18-208ENST00000479653 HOXA2O43364 376 aa12.82□□□□□ -0.36
CCDC18-208ENST00000479653 GBP2P32456 591 aaPredicted RBP12.82□□□□□ -0.36
CCDC18-208ENST00000479653 METAP2P50579 478 aaKnown RBP eCLIP12.82□□□□□ -0.36
CCDC18-208ENST00000479653 FAM189BP81408 668 aa12.82□□□□□ -0.36
CCDC18-208ENST00000479653 LETM2Q2VYF4 491 aa12.82□□□□□ -0.36
CCDC18-208ENST00000479653 MCMDC2Q4G0Z9 681 aa12.82□□□□□ -0.36
CCDC18-208ENST00000479653 VPS52Q8N1B4 723 aa12.82□□□□□ -0.36
CCDC18-208ENST00000479653 SLC39A11Q8N1S5 342 aa12.82□□□□□ -0.36
CCDC18-208ENST00000479653 LRRC43Q8N309 656 aa12.82□□□□□ -0.36
CCDC18-208ENST00000479653 SLC44A3Q8N4M1 653 aa12.82□□□□□ -0.36
CCDC18-208ENST00000479653 GPR152Q8TDT2 470 aa12.82□□□□□ -0.36
CCDC18-208ENST00000479653 TMEM169Q96HH4 297 aa12.82□□□□□ -0.36
CCDC18-208ENST00000479653 PIGSQ96S52 555 aa12.82□□□□□ -0.36
CCDC18-208ENST00000479653 PPP1R16BQ96T49 567 aa12.82□□□□□ -0.36
CCDC18-208ENST00000479653 ELAC1Q9H777 363 aaKnown RBP12.82□□□□□ -0.36
CCDC18-208ENST00000479653 ZNF213O14771 459 aa12.81□□□□□ -0.36
CCDC18-208ENST00000479653 LAMTOR5O43504 91 aa12.81□□□□□ -0.36
CCDC18-208ENST00000479653 SRFP11831 508 aa12.81□□□□□ -0.36
CCDC18-208ENST00000479653 ALDH7A1P49419 539 aaKnown RBP12.81□□□□□ -0.36
CCDC18-208ENST00000479653 CSTF1Q05048 431 aaKnown RBP12.81□□□□□ -0.36
CCDC18-208ENST00000479653 AAMPQ13685 434 aa12.81□□□□□ -0.36
CCDC18-208ENST00000479653 PCNX4Q63HM2 1172 aa12.81□□□□□ -0.36
CCDC18-208ENST00000479653 PHLDB3Q6NSJ2 640 aa12.81□□□□□ -0.36
CCDC18-208ENST00000479653 MTHFD1LQ6UB35 978 aa12.81□□□□□ -0.36
CCDC18-208ENST00000479653 FAM43BQ6ZT52 329 aaPredicted RBP12.81□□□□□ -0.36
CCDC18-208ENST00000479653 MAML2Q8IZL2 1156 aaPredicted RBP12.81□□□□□ -0.36
CCDC18-208ENST00000479653 ENAHQ8N8S7 591 aaPredicted RBP12.81□□□□□ -0.36
CCDC18-208ENST00000479653 SMARCC2Q8TAQ2 1214 aa12.81□□□□□ -0.36
CCDC18-208ENST00000479653 OTUD7AQ8TE49 926 aaPredicted RBP12.81□□□□□ -0.36
CCDC18-208ENST00000479653 SLC22A17Q8WUG5 538 aa12.81□□□□□ -0.36
CCDC18-208ENST00000479653 TMEM40Q8WWA1 233 aa12.81□□□□□ -0.36
CCDC18-208ENST00000479653 MTMR8Q96EF0 704 aa12.81□□□□□ -0.36
CCDC18-208ENST00000479653 FAM227BQ96M60 508 aa12.81□□□□□ -0.36
CCDC18-208ENST00000479653 FOXQ1Q9C009 403 aa12.81□□□□□ -0.36
CCDC18-208ENST00000479653 DCTPP1Q9H773 170 aa12.81□□□□□ -0.36
CCDC18-208ENST00000479653 SFXN1Q9H9B4 322 aa12.81□□□□□ -0.36
CCDC18-208ENST00000479653 ARHGEF3Q9NR81 526 aa12.81□□□□□ -0.36
CCDC18-208ENST00000479653 SPATA6Q9NWH7 488 aaPredicted RBP12.81□□□□□ -0.36
CCDC18-208ENST00000479653 FAM208BQ5VWN6 2430 aa12.8□□□□□ -0.36
CCDC18-208ENST00000479653 SPTLC1O15269 473 aa12.8□□□□□ -0.36
CCDC18-208ENST00000479653 LRRN2O75325 713 aa12.8□□□□□ -0.36
CCDC18-208ENST00000479653 HOXB3P14651 431 aaPredicted RBP12.8□□□□□ -0.36
CCDC18-208ENST00000479653 GLULP15104 373 aa12.8□□□□□ -0.36
CCDC18-208ENST00000479653 KCNA2P16389 499 aa12.8□□□□□ -0.36
CCDC18-208ENST00000479653 KLRC1P26715 233 aa12.8□□□□□ -0.36
CCDC18-208ENST00000479653 PTPN14Q15678 1187 aa12.8□□□□□ -0.36
CCDC18-208ENST00000479653 DCLRE1AQ6PJP8 1040 aa12.8□□□□□ -0.36
CCDC18-208ENST00000479653 BORCS6Q96GS4 357 aa12.8□□□□□ -0.36
CCDC18-208ENST00000479653 CDHR1Q96JP9 859 aa12.8□□□□□ -0.36
CCDC18-208ENST00000479653 SMG5Q9UPR3 1016 aaKnown RBP12.8□□□□□ -0.36
CCDC18-208ENST00000479653 GTF3C3Q9Y5Q9 886 aa12.8□□□□□ -0.36
CCDC18-208ENST00000479653 B4E1Z4 1266 aa12.79□□□□□ -0.36
CCDC18-208ENST00000479653 N4BP1O75113 896 aaKnown RBP12.79□□□□□ -0.36
CCDC18-208ENST00000479653 ZSCAN20P17040 1043 aaPredicted RBP12.79□□□□□ -0.36
CCDC18-208ENST00000479653 KLRC2P26717 231 aa12.79□□□□□ -0.36
CCDC18-208ENST00000479653 BCAR1P56945 870 aa12.79□□□□□ -0.36
CCDC18-208ENST00000479653 GIT2Q14161 759 aa12.79□□□□□ -0.36
CCDC18-208ENST00000479653 KIZQ2M2Z5 673 aa12.79□□□□□ -0.36
CCDC18-208ENST00000479653 IFIT1BQ5T764 474 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms