RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 SUGCTQ9HAC7 445 aa16.98■□□□□ 0.31
COL16A1-211ENST00000479100 CYP26B1Q9NR63 512 aa16.98■□□□□ 0.31
COL16A1-211ENST00000479100 BMP2KQ9NSY1 1161 aaPredicted RBP16.98■□□□□ 0.31
COL16A1-211ENST00000479100 ANKEF1Q9NU02 776 aa16.98■□□□□ 0.31
COL16A1-211ENST00000479100 DDX19AQ9NUU7 478 aaKnown RBP16.98■□□□□ 0.31
COL16A1-211ENST00000479100 CIZ1Q9ULV3 898 aaPredicted RBP16.98■□□□□ 0.31
COL16A1-211ENST00000479100 WDR81Q562E7 1941 aa16.98■□□□□ 0.31
COL16A1-211ENST00000479100 SELPP16109 830 aa16.97■□□□□ 0.31
COL16A1-211ENST00000479100 ME1P48163 572 aa16.97■□□□□ 0.31
COL16A1-211ENST00000479100 CLCN3P51790 818 aa16.97■□□□□ 0.31
COL16A1-211ENST00000479100 ZNF618Q5T7W0 954 aa16.97■□□□□ 0.31
COL16A1-211ENST00000479100 EFCAB12Q6NXP0 572 aa16.97■□□□□ 0.31
COL16A1-211ENST00000479100 LRRC71Q8N4P6 559 aa16.97■□□□□ 0.31
COL16A1-211ENST00000479100 TMEM199Q8N511 208 aa16.97■□□□□ 0.31
COL16A1-211ENST00000479100 IPO9Q96P70 1041 aaKnown RBP16.97■□□□□ 0.31
COL16A1-211ENST00000479100 CDX2Q99626 313 aaPredicted RBP16.97■□□□□ 0.31
COL16A1-211ENST00000479100 MMTAG2Q9BU76 263 aaKnown RBP16.97■□□□□ 0.31
COL16A1-211ENST00000479100 WNT8AQ9H1J5 351 aa16.97■□□□□ 0.31
COL16A1-211ENST00000479100 MYH15Q9Y2K3 1946 aa16.97■□□□□ 0.31
COL16A1-211ENST00000479100 KDM3AQ9Y4C1 1321 aa16.96■□□□□ 0.31
COL16A1-211ENST00000479100 SMIM35A0A1B0GVV1 85 aa16.96■□□□□ 0.31
COL16A1-211ENST00000479100 PITPNM1O00562 1244 aa16.96■□□□□ 0.31
COL16A1-211ENST00000479100 PPP6R2O75170 966 aa16.96■□□□□ 0.31
COL16A1-211ENST00000479100 CSF2RAP15509 400 aa16.96■□□□□ 0.31
COL16A1-211ENST00000479100 MUTP22033 750 aa16.96■□□□□ 0.31
COL16A1-211ENST00000479100 TMOD1P28289 359 aa16.96■□□□□ 0.31
COL16A1-211ENST00000479100 POLGP54098 1239 aaPredicted RBP16.96■□□□□ 0.31
COL16A1-211ENST00000479100 TMEM62Q0P6H9 643 aa16.96■□□□□ 0.31
COL16A1-211ENST00000479100 TMEM240Q5SV17 173 aa16.96■□□□□ 0.31
COL16A1-211ENST00000479100 LRRC8DQ7L1W4 858 aa16.96■□□□□ 0.31
COL16A1-211ENST00000479100 KCNG4Q8TDN1 519 aa16.96■□□□□ 0.31
COL16A1-211ENST00000479100 CALML4Q96GE6 196 aa16.96■□□□□ 0.31
COL16A1-211ENST00000479100 SPATA32Q96LK8 384 aa16.96■□□□□ 0.31
COL16A1-211ENST00000479100 CHMP5Q9NZZ3 219 aa16.96■□□□□ 0.31
COL16A1-211ENST00000479100 DNM3Q9UQ16 869 aa16.96■□□□□ 0.31
COL16A1-211ENST00000479100 TMEM265A0A087WTH1 108 aa16.95■□□□□ 0.3
COL16A1-211ENST00000479100 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.95■□□□□ 0.3
COL16A1-211ENST00000479100 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.95■□□□□ 0.3
COL16A1-211ENST00000479100 ARHGEF35A5YM69 484 aa16.95■□□□□ 0.3
COL16A1-211ENST00000479100 RSPH10B2B2RC85 870 aa16.95■□□□□ 0.3
COL16A1-211ENST00000479100 E9PMD0 336 aa16.95■□□□□ 0.3
COL16A1-211ENST00000479100 CUTAO60888 179 aa16.95■□□□□ 0.3
COL16A1-211ENST00000479100 MAFO75444 373 aaPredicted RBP16.95■□□□□ 0.3
COL16A1-211ENST00000479100 IQCF3P0C7M6 154 aa16.95■□□□□ 0.3
COL16A1-211ENST00000479100 RSPH10BP0C881 870 aa16.95■□□□□ 0.3
COL16A1-211ENST00000479100 XRCC6P12956 609 aaKnown RBP eCLIP16.95■□□□□ 0.3
COL16A1-211ENST00000479100 TXLNAP40222 546 aa16.95■□□□□ 0.3
COL16A1-211ENST00000479100 RFC5P40937 340 aa16.95■□□□□ 0.3
COL16A1-211ENST00000479100 DNM2P50570 870 aa16.95■□□□□ 0.3
COL16A1-211ENST00000479100 PPIGQ13427 754 aaKnown RBP eCLIP16.95■□□□□ 0.36e-7■■■■■ 47.1
COL16A1-211ENST00000479100 TPRNQ4KMQ1 711 aa16.95■□□□□ 0.3
COL16A1-211ENST00000479100 USP49Q70CQ1 688 aa16.95■□□□□ 0.3
COL16A1-211ENST00000479100 KIAA0319LQ8IZA0 1049 aa16.95■□□□□ 0.3
COL16A1-211ENST00000479100 SLC7A3Q8WY07 619 aa16.95■□□□□ 0.3
COL16A1-211ENST00000479100 SYMPKQ92797 1274 aaKnown RBP16.95■□□□□ 0.3
COL16A1-211ENST00000479100 EPSTI1Q96J88 318 aa16.95■□□□□ 0.3
COL16A1-211ENST00000479100 PNMA5Q96PV4 448 aa16.95■□□□□ 0.3
COL16A1-211ENST00000479100 MAP7D2Q96T17 732 aa16.95■□□□□ 0.3
COL16A1-211ENST00000479100 PPP1R16BQ96T49 567 aa16.95■□□□□ 0.3
COL16A1-211ENST00000479100 JPH2Q9BR39 696 aaPredicted RBP16.95■□□□□ 0.3
COL16A1-211ENST00000479100 RCOR1Q9UKL0 485 aa16.95■□□□□ 0.3
COL16A1-211ENST00000479100 AKT3Q9Y243 479 aa16.95■□□□□ 0.3
COL16A1-211ENST00000479100 PPME1Q9Y570 386 aa16.95■□□□□ 0.3
COL16A1-211ENST00000479100 MORC2Q9Y6X9 1032 aaPredicted RBP16.95■□□□□ 0.3
COL16A1-211ENST00000479100 PRUNE2Q8WUY3 3088 aa16.94■□□□□ 0.3
COL16A1-211ENST00000479100 M0QZ92 97 aa16.94■□□□□ 0.3
COL16A1-211ENST00000479100 USO1O60763 962 aaKnown RBP16.94■□□□□ 0.3
COL16A1-211ENST00000479100 CAND2O75155 1236 aa16.94■□□□□ 0.3
COL16A1-211ENST00000479100 VTNP04004 478 aa16.94■□□□□ 0.3
COL16A1-211ENST00000479100 SSBP05455 408 aaKnown RBP eCLIP16.94■□□□□ 0.3
COL16A1-211ENST00000479100 RARRES1P49788 294 aa16.94■□□□□ 0.3
COL16A1-211ENST00000479100 MRPS6P82932 125 aaKnown RBP16.94■□□□□ 0.3
COL16A1-211ENST00000479100 RBL2Q08999 1139 aa16.94■□□□□ 0.3
COL16A1-211ENST00000479100 GRB10Q13322 594 aa16.94■□□□□ 0.3
COL16A1-211ENST00000479100 EMC2Q15006 297 aa16.94■□□□□ 0.3
COL16A1-211ENST00000479100 KARSQ15046 597 aaKnown RBP16.94■□□□□ 0.3
COL16A1-211ENST00000479100 DEFB128Q7Z7B8 93 aa16.94■□□□□ 0.3
COL16A1-211ENST00000479100 EXOC8Q8IYI6 725 aa16.94■□□□□ 0.3
COL16A1-211ENST00000479100 NME8Q8N427 588 aa16.94■□□□□ 0.3
COL16A1-211ENST00000479100 LEO1Q8WVC0 666 aaPredicted RBP16.94■□□□□ 0.3
COL16A1-211ENST00000479100 VWCEQ96DN2 955 aa16.94■□□□□ 0.3
COL16A1-211ENST00000479100 CEP89Q96ST8 783 aa16.94■□□□□ 0.3
COL16A1-211ENST00000479100 NT5C3AQ9H0P0 336 aa16.94■□□□□ 0.3
COL16A1-211ENST00000479100 BHMT2Q9H2M3 363 aa16.94■□□□□ 0.3
COL16A1-211ENST00000479100 DBR1Q9UK59 544 aaKnown RBP16.94■□□□□ 0.3
COL16A1-211ENST00000479100 GINS2Q9Y248 185 aa16.94■□□□□ 0.3
COL16A1-211ENST00000479100 CDY2AQ9Y6F7 541 aa16.94■□□□□ 0.3
COL16A1-211ENST00000479100 DLL1O00548 723 aa16.93■□□□□ 0.3
COL16A1-211ENST00000479100 EYA4O95677 639 aa16.93■□□□□ 0.3
COL16A1-211ENST00000479100 RPLP2P05387 115 aaKnown RBP16.93■□□□□ 0.3
COL16A1-211ENST00000479100 ACRP10323 421 aa16.93■□□□□ 0.3
COL16A1-211ENST00000479100 DRP2Q13474 957 aa16.93■□□□□ 0.3
COL16A1-211ENST00000479100 IER5Q5VY09 327 aa16.93■□□□□ 0.3
COL16A1-211ENST00000479100 ZNF365Q70YC5 407 aa16.93■□□□□ 0.3
COL16A1-211ENST00000479100 MAEAQ7L5Y9 396 aa16.93■□□□□ 0.3
COL16A1-211ENST00000479100 KCNK18Q7Z418 384 aa16.93■□□□□ 0.3
COL16A1-211ENST00000479100 TMEM143Q96AN5 459 aa16.93■□□□□ 0.3
COL16A1-211ENST00000479100 ZNF668Q96K58 619 aaPredicted RBP16.93■□□□□ 0.3
COL16A1-211ENST00000479100 SCLT1Q96NL6 688 aa16.93■□□□□ 0.3
COL16A1-211ENST00000479100 PANK2Q9BZ23 570 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms