RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 SMIM10L2BP0DMW5 78 aa14.57□□□□□ -0.08
CHD3-210ENST00000479080 ZNF131P52739 623 aa14.57□□□□□ -0.08
CHD3-210ENST00000479080 ASIC1P78348 528 aa14.57□□□□□ -0.08
CHD3-210ENST00000479080 EMC2Q15006 297 aa14.57□□□□□ -0.08
CHD3-210ENST00000479080 KMT5BQ4FZB7 885 aa14.57□□□□□ -0.08
CHD3-210ENST00000479080 GLIS3Q8NEA6 775 aa14.57□□□□□ -0.08
CHD3-210ENST00000479080 LMBR1Q8WVP7 490 aa14.57□□□□□ -0.08
CHD3-210ENST00000479080 CTAGE1Q96RT6 745 aa14.57□□□□□ -0.08
CHD3-210ENST00000479080 MTG1Q9BT17 334 aaPredicted RBP14.57□□□□□ -0.08
CHD3-210ENST00000479080 NRBP2Q9NSY0 501 aa14.57□□□□□ -0.08
CHD3-210ENST00000479080 PCDH10Q9P2E7 1040 aa14.57□□□□□ -0.08
CHD3-210ENST00000479080 TRPC6Q9Y210 931 aa14.57□□□□□ -0.08
CHD3-210ENST00000479080 PCDHA2Q9Y5H9 948 aa14.57□□□□□ -0.08
CHD3-210ENST00000479080 ACLYP53396 1101 aa14.56□□□□□ -0.08
CHD3-210ENST00000479080 ZNF200P98182 395 aaPredicted RBP14.56□□□□□ -0.08
CHD3-210ENST00000479080 COASYQ13057 564 aa14.56□□□□□ -0.08
CHD3-210ENST00000479080 MORC3Q14149 939 aa14.56□□□□□ -0.08
CHD3-210ENST00000479080 GRIK4Q16099 956 aa14.56□□□□□ -0.08
CHD3-210ENST00000479080 NBPF20Q3BBV1 942 aa14.56□□□□□ -0.08
CHD3-210ENST00000479080 UNC13DQ70J99 1090 aa14.56□□□□□ -0.08
CHD3-210ENST00000479080 OTUD6AQ7L8S5 288 aa14.56□□□□□ -0.08
CHD3-210ENST00000479080 ASAP3Q8TDY4 903 aa14.56□□□□□ -0.08
CHD3-210ENST00000479080 SPC25Q9HBM1 224 aa14.56□□□□□ -0.08
CHD3-210ENST00000479080 SETD4Q9NVD3 440 aa14.56□□□□□ -0.08
CHD3-210ENST00000479080 HDAC6Q9UBN7 1215 aa14.56□□□□□ -0.08
CHD3-210ENST00000479080 ZNF215Q9UL58 517 aaPredicted RBP14.56□□□□□ -0.08
CHD3-210ENST00000479080 PHF24Q9UPV7 400 aa14.56□□□□□ -0.08
CHD3-210ENST00000479080 COL1A2P08123 1366 aa14.56□□□□□ -0.08
CHD3-210ENST00000479080 LOXHD1Q8IVV2 1947 aa14.55□□□□□ -0.08
CHD3-210ENST00000479080 MYH9P35579 1960 aaKnown RBP14.55□□□□□ -0.08
CHD3-210ENST00000479080 MBLAC1A4D2B0 266 aaPredicted RBP14.55□□□□□ -0.08
CHD3-210ENST00000479080 SFI1A8K8P3 1242 aa14.55□□□□□ -0.08
CHD3-210ENST00000479080 BIN1O00499 593 aa14.55□□□□□ -0.08
CHD3-210ENST00000479080 KPNA6O60684 536 aa14.55□□□□□ -0.08
CHD3-210ENST00000479080 DGAT1O75907 488 aa14.55□□□□□ -0.08
CHD3-210ENST00000479080 RHOBTB3O94955 611 aa14.55□□□□□ -0.08
CHD3-210ENST00000479080 MYL1P05976 194 aa14.55□□□□□ -0.08
CHD3-210ENST00000479080 IGBP1P78318 339 aa14.55□□□□□ -0.08
CHD3-210ENST00000479080 PPFIA1Q13136 1202 aa14.55□□□□□ -0.08
CHD3-210ENST00000479080 BRDTQ58F21 947 aaPredicted RBP14.55□□□□□ -0.08
CHD3-210ENST00000479080 ZNF484Q5JVG2 852 aa14.55□□□□□ -0.08
CHD3-210ENST00000479080 ISM2Q6H9L7 571 aa14.55□□□□□ -0.08
CHD3-210ENST00000479080 RUFY4Q6ZNE9 571 aa14.55□□□□□ -0.08
CHD3-210ENST00000479080 MAEAQ7L5Y9 396 aa14.55□□□□□ -0.08
CHD3-210ENST00000479080 RNF180Q86T96 592 aa14.55□□□□□ -0.08
CHD3-210ENST00000479080 SFR1Q86XK3 245 aa14.55□□□□□ -0.08
CHD3-210ENST00000479080 LRRC71Q8N4P6 559 aa14.55□□□□□ -0.08
CHD3-210ENST00000479080 KIAA0895Q8NCT3 520 aa14.55□□□□□ -0.08
CHD3-210ENST00000479080 SMARCE1Q969G3 411 aa14.55□□□□□ -0.08
CHD3-210ENST00000479080 SYAP1Q96A49 352 aaPredicted RBP14.55□□□□□ -0.08
CHD3-210ENST00000479080 TSEN34Q9BSV6 310 aaKnown RBP14.55□□□□□ -0.08
CHD3-210ENST00000479080 GDAQ9Y2T3 454 aa14.55□□□□□ -0.08
CHD3-210ENST00000479080 PVALEFA0A1B0GWK0 134 aa14.54□□□□□ -0.08
CHD3-210ENST00000479080 A0A1W2PQ45 241 aaPredicted RBP14.54□□□□□ -0.08
CHD3-210ENST00000479080 A0A1W2PQY0 241 aa14.54□□□□□ -0.08
CHD3-210ENST00000479080 MOXD2PA6NHM9 499 aa14.54□□□□□ -0.08
CHD3-210ENST00000479080 MYCNP04198 464 aaPredicted RBP14.54□□□□□ -0.08
CHD3-210ENST00000479080 GJB1P08034 283 aa14.54□□□□□ -0.08
CHD3-210ENST00000479080 CD44P16070 742 aaKnown RBP14.54□□□□□ -0.08
CHD3-210ENST00000479080 ARL2P36404 184 aa14.54□□□□□ -0.08
CHD3-210ENST00000479080 RFC5P40937 340 aa14.54□□□□□ -0.08
CHD3-210ENST00000479080 CASP5P51878 434 aa14.54□□□□□ -0.08
CHD3-210ENST00000479080 AMPD3Q01432 767 aa14.54□□□□□ -0.08
CHD3-210ENST00000479080 STK4Q13043 487 aa14.54□□□□□ -0.08
CHD3-210ENST00000479080 KCNB1Q14721 858 aa14.54□□□□□ -0.08
CHD3-210ENST00000479080 MTHFD1LQ6UB35 978 aa14.54□□□□□ -0.08
CHD3-210ENST00000479080 SMYD4Q8IYR2 804 aaPredicted RBP14.54□□□□□ -0.08
CHD3-210ENST00000479080 SLC43A3Q8NBI5 491 aa14.54□□□□□ -0.08
CHD3-210ENST00000479080 DIS3LQ8TF46 1054 aaKnown RBP14.54□□□□□ -0.08
CHD3-210ENST00000479080 U2AF1L4Q8WU68 220 aaKnown RBP14.54□□□□□ -0.08
CHD3-210ENST00000479080 WNT8BQ93098 351 aa14.54□□□□□ -0.08
CHD3-210ENST00000479080 TMEM143Q96AN5 459 aa14.54□□□□□ -0.08
CHD3-210ENST00000479080 ATP6V0A4Q9HBG4 840 aa14.54□□□□□ -0.08
CHD3-210ENST00000479080 PANK4Q9NVE7 773 aa14.54□□□□□ -0.08
CHD3-210ENST00000479080 KCND2Q9NZV8 630 aa14.54□□□□□ -0.08
CHD3-210ENST00000479080 ODF2LQ9ULJ1 636 aa14.54□□□□□ -0.08
CHD3-210ENST00000479080 PPME1Q9Y570 386 aa14.54□□□□□ -0.08
CHD3-210ENST00000479080 ADGRA3Q8IWK6 1321 aa14.54□□□□□ -0.08
CHD3-210ENST00000479080 DNM1LO00429 736 aa14.53□□□□□ -0.08
CHD3-210ENST00000479080 ZEB2O60315 1214 aa14.53□□□□□ -0.08
CHD3-210ENST00000479080 SGPL1O95470 568 aa14.53□□□□□ -0.08
CHD3-210ENST00000479080 IDEP14735 1019 aa14.53□□□□□ -0.08
CHD3-210ENST00000479080 GLRA2P23416 452 aa14.53□□□□□ -0.08
CHD3-210ENST00000479080 KLRC1P26715 233 aa14.53□□□□□ -0.08
CHD3-210ENST00000479080 CLCN3P51790 818 aa14.53□□□□□ -0.08
CHD3-210ENST00000479080 POLGP54098 1239 aaPredicted RBP14.53□□□□□ -0.08
CHD3-210ENST00000479080 CHMP4BP1P59074 171 aa14.53□□□□□ -0.08
CHD3-210ENST00000479080 ZNF445P59923 1031 aa14.53□□□□□ -0.08
CHD3-210ENST00000479080 TYRO3Q06418 890 aa14.53□□□□□ -0.08
CHD3-210ENST00000479080 DPCR1Q3MIW9 517 aa14.53□□□□□ -0.08
CHD3-210ENST00000479080 FAM102BQ5T8I3 360 aa14.53□□□□□ -0.08
CHD3-210ENST00000479080 GDF6Q6KF10 455 aaPredicted RBP14.53□□□□□ -0.08
CHD3-210ENST00000479080 C11orf57Q6ZUT1 292 aaPredicted RBP14.53□□□□□ -0.08
CHD3-210ENST00000479080 SESTD1Q86VW0 696 aa14.53□□□□□ -0.08
CHD3-210ENST00000479080 PCSK9Q8NBP7 692 aaKnown RBP14.53□□□□□ -0.08
CHD3-210ENST00000479080 GSDMAQ96QA5 445 aa14.53□□□□□ -0.08
CHD3-210ENST00000479080 MED15Q96RN5 788 aa14.53□□□□□ -0.08
CHD3-210ENST00000479080 KATNAL1Q9BW62 490 aa14.53□□□□□ -0.08
CHD3-210ENST00000479080 POLR3FQ9H1D9 316 aaPredicted RBP14.53□□□□□ -0.08
CHD3-210ENST00000479080 GTF2IRD1Q9UHL9 959 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms