RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 STXBP5LQ9Y2K9 1186 aa29.92■■■□□ 2.38
CCM2-211ENST00000478582 ATP6V1DQ9Y5K8 247 aa29.92■■■□□ 2.38
CCM2-211ENST00000478582 SLC4A7Q9Y6M7 1214 aa29.92■■■□□ 2.38
CCM2-211ENST00000478582 IGKV6-21A0A0C4DH24 114 aa29.91■■■□□ 2.38
CCM2-211ENST00000478582 ZBTB39O15060 712 aa29.91■■■□□ 2.38
CCM2-211ENST00000478582 SLC26A4O43511 780 aa29.91■■■□□ 2.38
CCM2-211ENST00000478582 TBC1D8BQ0IIM8 1120 aa29.91■■■□□ 2.38
CCM2-211ENST00000478582 STK38Q15208 465 aa29.91■■■□□ 2.38
CCM2-211ENST00000478582 FAM26DQ5JW98 314 aa29.91■■■□□ 2.38
CCM2-211ENST00000478582 ZNF618Q5T7W0 954 aa29.91■■■□□ 2.38
CCM2-211ENST00000478582 PLA2G4FQ68DD2 849 aa29.91■■■□□ 2.38
CCM2-211ENST00000478582 LINC01465Q8N7H1 131 aa29.91■■■□□ 2.38
CCM2-211ENST00000478582 DNAJB3Q8WWF6 145 aa29.91■■■□□ 2.38
CCM2-211ENST00000478582 CEP170P1Q96L14 293 aa29.91■■■□□ 2.38
CCM2-211ENST00000478582 GUCD1Q96NT3 240 aa29.91■■■□□ 2.38
CCM2-211ENST00000478582 RBM19Q9Y4C8 960 aaKnown RBP29.91■■■□□ 2.38
CCM2-211ENST00000478582 ZBBXA8MT70 800 aa29.9■■■□□ 2.38
CCM2-211ENST00000478582 PPP6R2O75170 966 aa29.9■■■□□ 2.38
CCM2-211ENST00000478582 MAFO75444 373 aaPredicted RBP29.9■■■□□ 2.38
CCM2-211ENST00000478582 CDC25AP30304 524 aa29.9■■■□□ 2.38
CCM2-211ENST00000478582 NPEPPSP55786 919 aa29.9■■■□□ 2.38
CCM2-211ENST00000478582 DNM1Q05193 864 aaKnown RBP29.9■■■□□ 2.38
CCM2-211ENST00000478582 GRIN1Q05586 938 aa29.9■■■□□ 2.38
CCM2-211ENST00000478582 GPNMBQ14956 572 aa29.9■■■□□ 2.38
CCM2-211ENST00000478582 ECM1Q16610 540 aa29.9■■■□□ 2.38
CCM2-211ENST00000478582 FOXD4L6Q3SYB3 417 aaPredicted RBP29.9■■■□□ 2.38
CCM2-211ENST00000478582 HYIQ5T013 277 aa29.9■■■□□ 2.38
CCM2-211ENST00000478582 FOXD4L3Q6VB84 417 aaPredicted RBP29.9■■■□□ 2.38
CCM2-211ENST00000478582 EXOC8Q8IYI6 725 aa29.9■■■□□ 2.38
CCM2-211ENST00000478582 KCTD17Q8N5Z5 321 aa29.9■■■□□ 2.38
CCM2-211ENST00000478582 PBX4Q9BYU1 374 aa29.9■■■□□ 2.38
CCM2-211ENST00000478582 DBR1Q9UK59 544 aaKnown RBP29.9■■■□□ 2.38
CCM2-211ENST00000478582 TET1Q8NFU7 2136 aa29.89■■■□□ 2.38
CCM2-211ENST00000478582 SPTLC2O15270 562 aa29.89■■■□□ 2.38
CCM2-211ENST00000478582 XKR9Q5GH70 373 aa29.89■■■□□ 2.38
CCM2-211ENST00000478582 POTEGQ6S5H5 508 aa29.89■■■□□ 2.38
CCM2-211ENST00000478582 KIAA0319LQ8IZA0 1049 aa29.89■■■□□ 2.38
CCM2-211ENST00000478582 ZNF579Q8NAF0 562 aaKnown RBP29.89■■■□□ 2.38
CCM2-211ENST00000478582 SH2D3AQ9BRG2 576 aa29.89■■■□□ 2.38
CCM2-211ENST00000478582 CIZ1Q9ULV3 898 aaPredicted RBP29.89■■■□□ 2.38
CCM2-211ENST00000478582 RARRES1P49788 294 aa29.88■■■□□ 2.37
CCM2-211ENST00000478582 EFCAB12Q6NXP0 572 aa29.88■■■□□ 2.37
CCM2-211ENST00000478582 KRI1Q8N9T8 703 aaKnown RBP29.88■■■□□ 2.37
CCM2-211ENST00000478582 PIGOQ8TEQ8 1089 aa29.88■■■□□ 2.37
CCM2-211ENST00000478582 TIFAQ96CG3 184 aa29.88■■■□□ 2.37
CCM2-211ENST00000478582 JPH2Q9BR39 696 aaPredicted RBP29.88■■■□□ 2.37
CCM2-211ENST00000478582 FAM49AQ9H0Q0 323 aaPredicted RBP29.88■■■□□ 2.37
CCM2-211ENST00000478582 DHX33Q9H6R0 707 aaKnown RBP29.88■■■□□ 2.37
CCM2-211ENST00000478582 KIAA1024Q9UPX6 916 aa29.88■■■□□ 2.37
CCM2-211ENST00000478582 RSPH10B2B2RC85 870 aa29.87■■■□□ 2.37
CCM2-211ENST00000478582 RSPH10BP0C881 870 aa29.87■■■□□ 2.37
CCM2-211ENST00000478582 TMOD1P28289 359 aa29.87■■■□□ 2.37
CCM2-211ENST00000478582 PBX2P40425 430 aa29.87■■■□□ 2.37
CCM2-211ENST00000478582 RFC5P40937 340 aa29.87■■■□□ 2.37
CCM2-211ENST00000478582 METTL13Q8N6R0 699 aa29.87■■■□□ 2.37
CCM2-211ENST00000478582 CSRNP2Q9H175 543 aa29.87■■■□□ 2.37
CCM2-211ENST00000478582 RCOR1Q9UKL0 485 aa29.87■■■□□ 2.37
CCM2-211ENST00000478582 KDM3AQ9Y4C1 1321 aa29.87■■■□□ 2.37
CCM2-211ENST00000478582 CXCL10P02778 98 aa29.86■■■□□ 2.37
CCM2-211ENST00000478582 UBA7P41226 1012 aa29.86■■■□□ 2.37
CCM2-211ENST00000478582 MGAT3Q09327 533 aa29.86■■■□□ 2.37
CCM2-211ENST00000478582 RAB30Q15771 203 aa29.86■■■□□ 2.37
CCM2-211ENST00000478582 CABP7Q86V35 215 aa29.86■■■□□ 2.37
CCM2-211ENST00000478582 KCNG4Q8TDN1 519 aa29.86■■■□□ 2.37
CCM2-211ENST00000478582 CDX2Q99626 313 aaPredicted RBP29.86■■■□□ 2.37
CCM2-211ENST00000478582 CCSER1Q9C0I3 900 aa29.86■■■□□ 2.37
CCM2-211ENST00000478582 NT5C3AQ9H0P0 336 aa29.86■■■□□ 2.37
CCM2-211ENST00000478582 DDX19AQ9NUU7 478 aaKnown RBP29.86■■■□□ 2.37
CCM2-211ENST00000478582 MSRAQ9UJ68 235 aa29.86■■■□□ 2.37
CCM2-211ENST00000478582 NBNO60934 754 aa29.85■■■□□ 2.37
CCM2-211ENST00000478582 CHRNA1P02708 482 aa29.85■■■□□ 2.37
CCM2-211ENST00000478582 MRPS6P82932 125 aaKnown RBP29.85■■■□□ 2.37
CCM2-211ENST00000478582 IER5Q5VY09 327 aa29.85■■■□□ 2.37
CCM2-211ENST00000478582 ZNF710Q8N1W2 664 aa29.85■■■□□ 2.37
CCM2-211ENST00000478582 SLC7A3Q8WY07 619 aa29.85■■■□□ 2.37
CCM2-211ENST00000478582 CLIC6Q96NY7 704 aa29.85■■■□□ 2.37
CCM2-211ENST00000478582 PNMA5Q96PV4 448 aa29.85■■■□□ 2.37
CCM2-211ENST00000478582 A0A087WWV3 80 aa29.84■■■□□ 2.37
CCM2-211ENST00000478582 GAS2O43903 313 aaKnown RBP29.84■■■□□ 2.37
CCM2-211ENST00000478582 BAIAP3O94812 1187 aa29.84■■■□□ 2.37
CCM2-211ENST00000478582 ATP2A2P16615 1042 aaKnown RBP29.84■■■□□ 2.37
CCM2-211ENST00000478582 CLCN3P51790 818 aa29.84■■■□□ 2.37
CCM2-211ENST00000478582 KRT85P78386 507 aa29.84■■■□□ 2.37
CCM2-211ENST00000478582 MKRN4PQ13434 485 aaPredicted RBP29.84■■■□□ 2.37
CCM2-211ENST00000478582 LRRC71Q8N4P6 559 aa29.84■■■□□ 2.37
CCM2-211ENST00000478582 ZNF576Q9H609 170 aa29.84■■■□□ 2.37
CCM2-211ENST00000478582 SUGCTQ9HAC7 445 aa29.84■■■□□ 2.37
CCM2-211ENST00000478582 DGAT1O75907 488 aa29.83■■■□□ 2.37
CCM2-211ENST00000478582 CTSHP09668 335 aa29.83■■■□□ 2.37
CCM2-211ENST00000478582 DNM2P50570 870 aa29.83■■■□□ 2.37
CCM2-211ENST00000478582 POLGP54098 1239 aaPredicted RBP29.83■■■□□ 2.37
CCM2-211ENST00000478582 GRB10Q13322 594 aa29.83■■■□□ 2.37
CCM2-211ENST00000478582 MBTPS1Q14703 1052 aa29.83■■■□□ 2.37
CCM2-211ENST00000478582 TMEM119Q4V9L6 283 aa29.83■■■□□ 2.37
CCM2-211ENST00000478582 CNKSR3Q6P9H4 555 aa29.83■■■□□ 2.37
CCM2-211ENST00000478582 PHOSPHO2Q8TCD6 241 aa29.83■■■□□ 2.37
CCM2-211ENST00000478582 CCDC43Q96MW1 224 aaKnown RBP29.83■■■□□ 2.37
CCM2-211ENST00000478582 MAP7D2Q96T17 732 aa29.83■■■□□ 2.37
CCM2-211ENST00000478582 DNM3Q9UQ16 869 aa29.83■■■□□ 2.37
CCM2-211ENST00000478582 CDY2AQ9Y6F7 541 aa29.83■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms