RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 HSD17B14Q9BPX1 270 aa7.71□□□□□ -1.18
BRCA1-215ENST00000478531 NIFKQ9BYG3 293 aaKnown RBP7.71□□□□□ -1.18
BRCA1-215ENST00000478531 OSBPL7Q9BZF2 842 aa7.71□□□□□ -1.18
BRCA1-215ENST00000478531 ZSCAN16Q9H4T2 348 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-215ENST00000478531 CYP26B1Q9NR63 512 aa7.71□□□□□ -1.18
BRCA1-215ENST00000478531 MYO9BQ13459 2157 aa7.7□□□□□ -1.18
BRCA1-215ENST00000478531 COL6A3P12111 3177 aa7.7□□□□□ -1.18
BRCA1-215ENST00000478531 MAGEB2O15479 319 aa7.7□□□□□ -1.18
BRCA1-215ENST00000478531 BMP15O95972 392 aa7.7□□□□□ -1.18
BRCA1-215ENST00000478531 F13A1P00488 732 aa7.7□□□□□ -1.18
BRCA1-215ENST00000478531 FGBP02675 491 aa7.7□□□□□ -1.18
BRCA1-215ENST00000478531 PFKMP08237 780 aa7.7□□□□□ -1.18
BRCA1-215ENST00000478531 SPATA31C1P0DKV0 1188 aa7.7□□□□□ -1.18
BRCA1-215ENST00000478531 ACTN1P12814 892 aa7.7□□□□□ -1.18
BRCA1-215ENST00000478531 TMOD1P28289 359 aa7.7□□□□□ -1.18
BRCA1-215ENST00000478531 MARCKSP29966 332 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-215ENST00000478531 TARBP2Q15633 366 aaKnown RBP7.7□□□□□ -1.18
BRCA1-215ENST00000478531 KIZQ2M2Z5 673 aa7.7□□□□□ -1.18
BRCA1-215ENST00000478531 IER5Q5VY09 327 aa7.7□□□□□ -1.18
BRCA1-215ENST00000478531 OTUD6AQ7L8S5 288 aa7.7□□□□□ -1.18
BRCA1-215ENST00000478531 KIAA0319LQ8IZA0 1049 aa7.7□□□□□ -1.18
BRCA1-215ENST00000478531 SLC7A3Q8WY07 619 aa7.7□□□□□ -1.18
BRCA1-215ENST00000478531 VWCEQ96DN2 955 aa7.7□□□□□ -1.18
BRCA1-215ENST00000478531 TUFT1Q9NNX1 390 aa7.7□□□□□ -1.18
BRCA1-215ENST00000478531 CXXC1Q9P0U4 656 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-215ENST00000478531 TRPV2Q9Y5S1 764 aa7.7□□□□□ -1.18
BRCA1-215ENST00000478531 REV3LO60673 3130 aa7.7□□□□□ -1.18
BRCA1-215ENST00000478531 A0A1W2PPC1 479 aa7.7□□□□□ -1.18
BRCA1-215ENST00000478531 USO1O60763 962 aaKnown RBP7.7□□□□□ -1.18
BRCA1-215ENST00000478531 PARNO95453 639 aaKnown RBP7.7□□□□□ -1.18
BRCA1-215ENST00000478531 RPLP2P05387 115 aaKnown RBP7.7□□□□□ -1.18
BRCA1-215ENST00000478531 RPA1P27694 616 aa7.7□□□□□ -1.18
BRCA1-215ENST00000478531 DNM2P50570 870 aa7.7□□□□□ -1.18
BRCA1-215ENST00000478531 MGAT3Q09327 533 aa7.7□□□□□ -1.18
BRCA1-215ENST00000478531 DRP2Q13474 957 aa7.7□□□□□ -1.18
BRCA1-215ENST00000478531 PDIA5Q14554 519 aa7.7□□□□□ -1.18
BRCA1-215ENST00000478531 GPNMBQ14956 572 aa7.7□□□□□ -1.18
BRCA1-215ENST00000478531 EMC2Q15006 297 aa7.7□□□□□ -1.18
BRCA1-215ENST00000478531 TCTN1Q2MV58 587 aa7.7□□□□□ -1.18
BRCA1-215ENST00000478531 KRT79Q5XKE5 535 aa7.7□□□□□ -1.18
BRCA1-215ENST00000478531 ARL6IP4Q66PJ3 421 aaKnown RBP7.7□□□□□ -1.18
BRCA1-215ENST00000478531 CNKSR3Q6P9H4 555 aa7.7□□□□□ -1.18
BRCA1-215ENST00000478531 RPAINQ86UA6 219 aa7.7□□□□□ -1.18
BRCA1-215ENST00000478531 RASSF8Q8NHQ8 419 aa7.7□□□□□ -1.18
BRCA1-215ENST00000478531 USP28Q96RU2 1077 aa7.7□□□□□ -1.18
BRCA1-215ENST00000478531 CEP89Q96ST8 783 aa7.7□□□□□ -1.18
BRCA1-215ENST00000478531 PLIN2Q99541 437 aa7.7□□□□□ -1.18
BRCA1-215ENST00000478531 OSMRQ99650 979 aa7.7□□□□□ -1.18
BRCA1-215ENST00000478531 POLR3CQ9BUI4 534 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-215ENST00000478531 IFIH1Q9BYX4 1025 aaKnown RBP7.7□□□□□ -1.18
BRCA1-215ENST00000478531 MTIF3Q9H2K0 278 aaKnown RBP7.7□□□□□ -1.18
BRCA1-215ENST00000478531 DDX19AQ9NUU7 478 aaKnown RBP7.7□□□□□ -1.18
BRCA1-215ENST00000478531 PRUNE2Q8WUY3 3088 aa7.69□□□□□ -1.18
BRCA1-215ENST00000478531 MAFO75444 373 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-215ENST00000478531 CXCL10P02778 98 aa7.69□□□□□ -1.18
BRCA1-215ENST00000478531 CD52P31358 61 aa7.69□□□□□ -1.18
BRCA1-215ENST00000478531 RFC5P40937 340 aa7.69□□□□□ -1.18
BRCA1-215ENST00000478531 KCNJ6P48051 423 aa7.69□□□□□ -1.18
BRCA1-215ENST00000478531 RARRES1P49788 294 aa7.69□□□□□ -1.18
BRCA1-215ENST00000478531 NLRP11P59045 1033 aaKnown RBP7.69□□□□□ -1.18
BRCA1-215ENST00000478531 GRIN1Q05586 938 aa7.69□□□□□ -1.18
BRCA1-215ENST00000478531 LPIN1Q14693 890 aa7.69□□□□□ -1.18
BRCA1-215ENST00000478531 STK38Q15208 465 aa7.69□□□□□ -1.18
BRCA1-215ENST00000478531 ECM1Q16610 540 aa7.69□□□□□ -1.18
BRCA1-215ENST00000478531 FAM26DQ5JW98 314 aa7.69□□□□□ -1.18
BRCA1-215ENST00000478531 FBXO47Q5MNV8 452 aa7.69□□□□□ -1.18
BRCA1-215ENST00000478531 FAM109BQ6ICB4 259 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-215ENST00000478531 TSHZ1Q6ZSZ6 1077 aa7.69□□□□□ -1.18
BRCA1-215ENST00000478531 RHPN2Q8IUC4 686 aa7.69□□□□□ -1.18
BRCA1-215ENST00000478531 NME8Q8N427 588 aa7.69□□□□□ -1.18
BRCA1-215ENST00000478531 LINC01465Q8N7H1 131 aa7.69□□□□□ -1.18
BRCA1-215ENST00000478531 DBF4BQ8NFT6 615 aa7.69□□□□□ -1.18
BRCA1-215ENST00000478531 NLRP7Q8WX94 980 aa7.69□□□□□ -1.18
BRCA1-215ENST00000478531 HERVK_113Q902F9 699 aa7.69□□□□□ -1.18
BRCA1-215ENST00000478531 TMEM143Q96AN5 459 aa7.69□□□□□ -1.18
BRCA1-215ENST00000478531 CDK5RAP3Q96JB5 506 aa7.69□□□□□ -1.18
BRCA1-215ENST00000478531 ZNF396Q96N95 335 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-215ENST00000478531 CELF4Q9BZC1 486 aaKnown RBP7.69□□□□□ -1.18
BRCA1-215ENST00000478531 CDHR5Q9HBB8 845 aa7.69□□□□□ -1.18
BRCA1-215ENST00000478531 SUCLA2Q9P2R7 463 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-215ENST00000478531 TFIP11Q9UBB9 837 aaKnown RBP7.69□□□□□ -1.18
BRCA1-215ENST00000478531 KIAA1024Q9UPX6 916 aa7.69□□□□□ -1.18
BRCA1-215ENST00000478531 ARHGEF35A5YM69 484 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 SOX1O00570 391 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-215ENST00000478531 LYPLA2O95372 231 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 PDIA4P13667 645 aaKnown RBP7.68□□□□□ -1.18
BRCA1-215ENST00000478531 IBSPP21815 317 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-215ENST00000478531 ANP32AP39687 249 aaKnown RBP7.68□□□□□ -1.18
BRCA1-215ENST00000478531 PAK2Q13177 524 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 PTPAQ15257 358 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 PLEKHG4Q58EX7 1191 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 SPECC1Q5M775 1068 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 MAEAQ7L5Y9 396 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 KSR1Q8IVT5 923 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 TMEM40Q8WWA1 233 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 SEPT8Q92599 483 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 LRCH3Q96II8 777 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 NLRP4Q96MN2 994 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 NACC1Q96RE7 527 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 MTRQ99707 1265 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms