RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 RPS6KA5O75582 802 aa26.34■■□□□ 1.81
C9orf3-215ENST00000478473 CCDC85BQ15834 202 aaPredicted RBP26.34■■□□□ 1.81
C9orf3-215ENST00000478473 EPC2Q52LR7 807 aa26.34■■□□□ 1.81
C9orf3-215ENST00000478473 NPAS4Q8IUM7 802 aa26.34■■□□□ 1.81
C9orf3-215ENST00000478473 CLP1Q92989 425 aaKnown RBP26.34■■□□□ 1.81
C9orf3-215ENST00000478473 COL25A1Q9BXS0 654 aaPredicted RBP26.34■■□□□ 1.81
C9orf3-215ENST00000478473 PRDM6Q9NQX0 595 aa26.34■■□□□ 1.81
C9orf3-215ENST00000478473 THEGQ9P2T0 379 aa26.34■■□□□ 1.81
C9orf3-215ENST00000478473 VTNP04004 478 aa26.33■■□□□ 1.81
C9orf3-215ENST00000478473 CLCN3P51790 818 aa26.33■■□□□ 1.81
C9orf3-215ENST00000478473 KIZQ2M2Z5 673 aa26.33■■□□□ 1.81
C9orf3-215ENST00000478473 TRMT1LQ7Z2T5 733 aaKnown RBP26.33■■□□□ 1.81
C9orf3-215ENST00000478473 POTEDQ86YR6 584 aa26.33■■□□□ 1.81
C9orf3-215ENST00000478473 SLFN12Q8IYM2 578 aa26.33■■□□□ 1.81
C9orf3-215ENST00000478473 FBXO22Q8NEZ5 403 aa26.33■■□□□ 1.81
C9orf3-215ENST00000478473 GDPD5Q8WTR4 605 aa26.33■■□□□ 1.81
C9orf3-215ENST00000478473 PPM1EQ8WY54 764 aa26.33■■□□□ 1.81
C9orf3-215ENST00000478473 MAP7D2Q96T17 732 aa26.33■■□□□ 1.81
C9orf3-215ENST00000478473 ST3GAL5Q9UNP4 418 aa26.33■■□□□ 1.81
C9orf3-215ENST00000478473 ADGRA3Q8IWK6 1321 aa26.33■■□□□ 1.81
C9orf3-215ENST00000478473 H3BNC9 293 aa26.32■■□□□ 1.8
C9orf3-215ENST00000478473 DKC1O60832 514 aaKnown RBP eCLIP26.32■■□□□ 1.82e-9■□□□□ 11.2
C9orf3-215ENST00000478473 P4HBP07237 508 aaKnown RBP26.32■■□□□ 1.8
C9orf3-215ENST00000478473 QARSP47897 775 aaKnown RBP26.32■■□□□ 1.8
C9orf3-215ENST00000478473 CDC42EP1Q00587 391 aa26.32■■□□□ 1.8
C9orf3-215ENST00000478473 TBC1D8BQ0IIM8 1120 aa26.32■■□□□ 1.8
C9orf3-215ENST00000478473 TRIM29Q14134 588 aa26.32■■□□□ 1.8
C9orf3-215ENST00000478473 EPHA7Q15375 998 aa26.32■■□□□ 1.8
C9orf3-215ENST00000478473 TMEM266Q2M3C6 531 aa26.32■■□□□ 1.8
C9orf3-215ENST00000478473 ANO5Q75V66 913 aa26.32■■□□□ 1.8
C9orf3-215ENST00000478473 FAM228AQ86W67 206 aa26.32■■□□□ 1.8
C9orf3-215ENST00000478473 TMEM192Q8IY95 271 aa26.32■■□□□ 1.8
C9orf3-215ENST00000478473 RGS18Q9NS28 235 aa26.32■■□□□ 1.8
C9orf3-215ENST00000478473 C1orf112Q9NSG2 853 aa26.32■■□□□ 1.8
C9orf3-215ENST00000478473 MTUS1Q9ULD2 1270 aa26.32■■□□□ 1.8
C9orf3-215ENST00000478473 PPME1Q9Y570 386 aa26.32■■□□□ 1.8
C9orf3-215ENST00000478473 MAFO75444 373 aaPredicted RBP26.31■■□□□ 1.8
C9orf3-215ENST00000478473 RB1P06400 928 aa26.31■■□□□ 1.8
C9orf3-215ENST00000478473 STAG3L1P0CL83 205 aa26.31■■□□□ 1.8
C9orf3-215ENST00000478473 EIF4BP23588 611 aaKnown RBP26.31■■□□□ 1.8
C9orf3-215ENST00000478473 SARSP49591 514 aaKnown RBP26.31■■□□□ 1.8
C9orf3-215ENST00000478473 GPC3P51654 580 aa26.31■■□□□ 1.8
C9orf3-215ENST00000478473 NLRP11P59045 1033 aaKnown RBP26.31■■□□□ 1.8
C9orf3-215ENST00000478473 FAM189BP81408 668 aa26.31■■□□□ 1.8
C9orf3-215ENST00000478473 HMGN5P82970 282 aaKnown RBP26.31■■□□□ 1.8
C9orf3-215ENST00000478473 NFX1Q12986 1120 aaKnown RBP26.31■■□□□ 1.8
C9orf3-215ENST00000478473 DSC3Q14574 896 aa26.31■■□□□ 1.8
C9orf3-215ENST00000478473 TJAP1Q5JTD0 557 aa26.31■■□□□ 1.8
C9orf3-215ENST00000478473 CCDC83Q8IWF9 413 aa26.31■■□□□ 1.8
C9orf3-215ENST00000478473 LRRC71Q8N4P6 559 aa26.31■■□□□ 1.8
C9orf3-215ENST00000478473 FIBCD1Q8N539 461 aa26.31■■□□□ 1.8
C9orf3-215ENST00000478473 OSMRQ99650 979 aa26.31■■□□□ 1.8
C9orf3-215ENST00000478473 GINS2Q9Y248 185 aa26.31■■□□□ 1.8
C9orf3-215ENST00000478473 RWDD3Q9Y3V2 267 aa26.31■■□□□ 1.8
C9orf3-215ENST00000478473 RALGAPA2Q2PPJ7 1873 aa26.31■■□□□ 1.8
C9orf3-215ENST00000478473 C9IYK1 514 aa26.3■■□□□ 1.8
C9orf3-215ENST00000478473 MGEA5O60502 916 aa26.3■■□□□ 1.8
C9orf3-215ENST00000478473 C4orf19Q8IY42 314 aa26.3■■□□□ 1.8
C9orf3-215ENST00000478473 CMTR2Q8IYT2 770 aaKnown RBP26.3■■□□□ 1.8
C9orf3-215ENST00000478473 BANK1Q8NDB2 785 aa26.3■■□□□ 1.8
C9orf3-215ENST00000478473 RNF216Q9NWF9 866 aaPredicted RBP26.3■■□□□ 1.8
C9orf3-215ENST00000478473 SEPT9Q9UHD8 586 aaPredicted RBP26.3■■□□□ 1.8
C9orf3-215ENST00000478473 TTC28Q96AY4 2481 aa26.29■■□□□ 1.8
C9orf3-215ENST00000478473 BAG4O95429 457 aaKnown RBP26.29■■□□□ 1.8
C9orf3-215ENST00000478473 RABEP1Q15276 862 aa26.29■■□□□ 1.8
C9orf3-215ENST00000478473 SLC24A5Q71RS6 500 aa26.29■■□□□ 1.8
C9orf3-215ENST00000478473 SYMPKQ92797 1274 aaKnown RBP26.29■■□□□ 1.8
C9orf3-215ENST00000478473 MRPL38Q96DV4 380 aaKnown RBP26.29■■□□□ 1.8
C9orf3-215ENST00000478473 ASB2Q96Q27 587 aa26.29■■□□□ 1.8
C9orf3-215ENST00000478473 MTMR9Q96QG7 549 aa26.29■■□□□ 1.8
C9orf3-215ENST00000478473 WRAP73Q9P2S5 460 aaPredicted RBP26.29■■□□□ 1.8
C9orf3-215ENST00000478473 AKT3Q9Y243 479 aa26.29■■□□□ 1.8
C9orf3-215ENST00000478473 XIRP2A4UGR9 3374 aa26.29■■□□□ 1.8
C9orf3-215ENST00000478473 BMPR1AP36894 532 aa26.28■■□□□ 1.8
C9orf3-215ENST00000478473 MRPS5P82675 430 aaKnown RBP26.28■■□□□ 1.8
C9orf3-215ENST00000478473 MTERF2Q49AM1 385 aa26.28■■□□□ 1.8
C9orf3-215ENST00000478473 FBXO18Q8NFZ0 1043 aa26.28■■□□□ 1.8
C9orf3-215ENST00000478473 ADAM2Q99965 735 aa26.28■■□□□ 1.8
C9orf3-215ENST00000478473 JPH2Q9BR39 696 aaPredicted RBP26.28■■□□□ 1.8
C9orf3-215ENST00000478473 ELAC1Q9H777 363 aaKnown RBP26.28■■□□□ 1.8
C9orf3-215ENST00000478473 COG5Q9UP83 839 aa26.28■■□□□ 1.8
C9orf3-215ENST00000478473 TMEM150BA6NC51 233 aa26.27■■□□□ 1.8
C9orf3-215ENST00000478473 DDX11L8A8MPP1 907 aa26.27■■□□□ 1.8
C9orf3-215ENST00000478473 WNT7AO00755 349 aa26.27■■□□□ 1.8
C9orf3-215ENST00000478473 DARSP14868 501 aaKnown RBP26.27■■□□□ 1.8
C9orf3-215ENST00000478473 DRP2Q13474 957 aa26.27■■□□□ 1.8
C9orf3-215ENST00000478473 BTG3Q14201 252 aaPredicted RBP26.27■■□□□ 1.8
C9orf3-215ENST00000478473 MICALL1Q8N3F8 863 aa26.27■■□□□ 1.8
C9orf3-215ENST00000478473 PLVAPQ9BX97 442 aa26.27■■□□□ 1.8
C9orf3-215ENST00000478473 FOXP1Q9H334 677 aaPredicted RBP26.27■■□□□ 1.8
C9orf3-215ENST00000478473 CYP26B1Q9NR63 512 aa26.27■■□□□ 1.8
C9orf3-215ENST00000478473 PCDHA12Q9UN75 941 aa26.27■■□□□ 1.8
C9orf3-215ENST00000478473 NLRC5Q86WI3 1866 aa26.27■■□□□ 1.8
C9orf3-215ENST00000478473 SPTBN5Q9NRC6 3674 aaKnown RBP26.26■■□□□ 1.79
C9orf3-215ENST00000478473 LYPLA2O95372 231 aa26.26■■□□□ 1.79
C9orf3-215ENST00000478473 ORC2Q13416 577 aaPredicted RBP26.26■■□□□ 1.79
C9orf3-215ENST00000478473 GPM6BQ13491 265 aa26.26■■□□□ 1.79
C9orf3-215ENST00000478473 SAFBQ15424 915 aaKnown RBP eCLIP26.26■■□□□ 1.79
C9orf3-215ENST00000478473 EXOC8Q8IYI6 725 aa26.26■■□□□ 1.79
C9orf3-215ENST00000478473 C8orf76Q96K31 380 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms