RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 ZNF761Q86XN6 746 aaPredicted RBP5.43□□□□□ -1.54
SMARCA1-204ENST00000478420 SIAH1Q8IUQ4 282 aa5.43□□□□□ -1.54
SMARCA1-204ENST00000478420 TXNDC5Q8NBS9 432 aaKnown RBP5.43□□□□□ -1.54
SMARCA1-204ENST00000478420 CLRN3Q8NCR9 226 aa5.43□□□□□ -1.54
SMARCA1-204ENST00000478420 NUDT10Q8NFP7 164 aa5.43□□□□□ -1.54
SMARCA1-204ENST00000478420 RPGRQ92834 1020 aaKnown RBP5.43□□□□□ -1.54
SMARCA1-204ENST00000478420 NUDT11Q96G61 164 aa5.43□□□□□ -1.54
SMARCA1-204ENST00000478420 GPATCH3Q96I76 525 aa5.43□□□□□ -1.54
SMARCA1-204ENST00000478420 ZNF496Q96IT1 587 aaPredicted RBP5.43□□□□□ -1.54
SMARCA1-204ENST00000478420 LCORQ96JN0 433 aaPredicted RBP5.43□□□□□ -1.54
SMARCA1-204ENST00000478420 MYL10Q9BUA6 226 aa5.43□□□□□ -1.54
SMARCA1-204ENST00000478420 ZDHHC5Q9C0B5 715 aa5.43□□□□□ -1.54
SMARCA1-204ENST00000478420 MS4A5Q9H3V2 200 aa5.43□□□□□ -1.54
SMARCA1-204ENST00000478420 BARX1Q9HBU1 254 aaPredicted RBP5.43□□□□□ -1.54
SMARCA1-204ENST00000478420 LUC7LQ9NQ29 371 aaKnown RBP5.43□□□□□ -1.54
SMARCA1-204ENST00000478420 PHLDB1Q86UU1 1377 aa5.42□□□□□ -1.54
SMARCA1-204ENST00000478420 hCG_2014768A0A024R1R8 64 aa5.42□□□□□ -1.54
SMARCA1-204ENST00000478420 C9orf118A6NHY6 69 aa5.42□□□□□ -1.54
SMARCA1-204ENST00000478420 MAFGO15525 162 aa5.42□□□□□ -1.54
SMARCA1-204ENST00000478420 CUTAO60888 179 aa5.42□□□□□ -1.54
SMARCA1-204ENST00000478420 POLD1P28340 1107 aa5.42□□□□□ -1.54
SMARCA1-204ENST00000478420 ADCY8P40145 1251 aa5.42□□□□□ -1.54
SMARCA1-204ENST00000478420 CDKN1CP49918 316 aaPredicted RBP5.42□□□□□ -1.54
SMARCA1-204ENST00000478420 BCAR1P56945 870 aa5.42□□□□□ -1.54
SMARCA1-204ENST00000478420 GJA9P57773 515 aa5.42□□□□□ -1.54
SMARCA1-204ENST00000478420 ANAPC15P60006 121 aa5.42□□□□□ -1.54
SMARCA1-204ENST00000478420 NFATC3Q12968 1075 aa5.42□□□□□ -1.54
SMARCA1-204ENST00000478420 MOGSQ13724 837 aa5.42□□□□□ -1.54
SMARCA1-204ENST00000478420 MYBPC3Q14896 1274 aa5.42□□□□□ -1.54
SMARCA1-204ENST00000478420 NOLC1Q14978 699 aaKnown RBP eCLIP5.42□□□□□ -1.54
SMARCA1-204ENST00000478420 GRAMD4Q6IC98 578 aa5.42□□□□□ -1.54
SMARCA1-204ENST00000478420 FAM124AQ86V42 546 aa5.42□□□□□ -1.54
SMARCA1-204ENST00000478420 IFNL2Q8IZJ0 200 aa5.42□□□□□ -1.54
SMARCA1-204ENST00000478420 PRPF38AQ8NAV1 312 aaKnown RBP5.42□□□□□ -1.54
SMARCA1-204ENST00000478420 FERMT2Q96AC1 680 aa5.42□□□□□ -1.54
SMARCA1-204ENST00000478420 ST20-MTHFSA0A0A6YYL1 179 aa5.41□□□□□ -1.54
SMARCA1-204ENST00000478420 A0A0G2JNJ9 132 aa5.41□□□□□ -1.54
SMARCA1-204ENST00000478420 LCHNA4D1U4 455 aa5.41□□□□□ -1.54
SMARCA1-204ENST00000478420 MROH6A6NGR9 719 aa5.41□□□□□ -1.54
SMARCA1-204ENST00000478420 ALG1L2C9J202 215 aa5.41□□□□□ -1.54
SMARCA1-204ENST00000478420 TRIM13O60858 407 aa5.41□□□□□ -1.54
SMARCA1-204ENST00000478420 MAFO75444 373 aaPredicted RBP5.41□□□□□ -1.54
SMARCA1-204ENST00000478420 SASH1O94885 1247 aa5.41□□□□□ -1.54
SMARCA1-204ENST00000478420 BMP7P18075 431 aa5.41□□□□□ -1.54
SMARCA1-204ENST00000478420 KIAA2012Q0VF49 1180 aa5.41□□□□□ -1.54
SMARCA1-204ENST00000478420 KIAA1841Q6NSI8 718 aa5.41□□□□□ -1.54
SMARCA1-204ENST00000478420 LCNL1Q6ZST4 164 aa5.41□□□□□ -1.54
SMARCA1-204ENST00000478420 Q6ZUG5 572 aa5.41□□□□□ -1.54
SMARCA1-204ENST00000478420 KANSL1Q7Z3B3 1105 aa5.41□□□□□ -1.54
SMARCA1-204ENST00000478420 NECAB2Q7Z6G3 386 aa5.41□□□□□ -1.54
SMARCA1-204ENST00000478420 REXO1L1PQ8IX06 675 aa5.41□□□□□ -1.54
SMARCA1-204ENST00000478420 KLHL36Q8N4N3 616 aa5.41□□□□□ -1.54
SMARCA1-204ENST00000478420 SEMA4AQ9H3S1 761 aa5.41□□□□□ -1.54
SMARCA1-204ENST00000478420 TOPORSQ9NS56 1045 aaPredicted RBP5.41□□□□□ -1.54
SMARCA1-204ENST00000478420 SLC5A4Q9NY91 659 aa5.41□□□□□ -1.54
SMARCA1-204ENST00000478420 KCMF1Q9P0J7 381 aa5.41□□□□□ -1.54
SMARCA1-204ENST00000478420 Q9UFV3 132 aa5.41□□□□□ -1.54
SMARCA1-204ENST00000478420 KCNQ1P51787 676 aa5.4□□□□□ -1.54
SMARCA1-204ENST00000478420 GUCY2FP51841 1108 aa5.4□□□□□ -1.54
SMARCA1-204ENST00000478420 IGBP1P78318 339 aa5.4□□□□□ -1.54
SMARCA1-204ENST00000478420 JAG1P78504 1218 aa5.4□□□□□ -1.54
SMARCA1-204ENST00000478420 TOP3AQ13472 1001 aaPredicted RBP5.4□□□□□ -1.54
SMARCA1-204ENST00000478420 EIF4HQ15056 248 aaKnown RBP5.4□□□□□ -1.54
SMARCA1-204ENST00000478420 NT5DC1Q5TFE4 455 aa5.4□□□□□ -1.54
SMARCA1-204ENST00000478420 TMEM200BQ69YZ2 307 aa5.4□□□□□ -1.54
SMARCA1-204ENST00000478420 CXorf67Q86X51 503 aaPredicted RBP5.4□□□□□ -1.54
SMARCA1-204ENST00000478420 MARCH10Q8NA82 808 aaPredicted RBP5.4□□□□□ -1.54
SMARCA1-204ENST00000478420 COG1Q8WTW3 980 aa5.4□□□□□ -1.54
SMARCA1-204ENST00000478420 AHCYL2Q96HN2 611 aaKnown RBP5.4□□□□□ -1.54
SMARCA1-204ENST00000478420 AJUBAQ96IF1 538 aa5.4□□□□□ -1.54
SMARCA1-204ENST00000478420 ANO3Q9BYT9 981 aa5.4□□□□□ -1.54
SMARCA1-204ENST00000478420 KATNBL1Q9H079 304 aa5.4□□□□□ -1.54
SMARCA1-204ENST00000478420 PUS7LQ9H0K6 701 aaKnown RBP5.4□□□□□ -1.54
SMARCA1-204ENST00000478420 MTG2Q9H4K7 406 aa5.4□□□□□ -1.54
SMARCA1-204ENST00000478420 VTA1Q9NP79 307 aa5.4□□□□□ -1.54
SMARCA1-204ENST00000478420 USP40Q9NVE5 1235 aa5.4□□□□□ -1.54
SMARCA1-204ENST00000478420 ADAM29Q9UKF5 820 aa5.4□□□□□ -1.54
SMARCA1-204ENST00000478420 CDC42EP3Q9UKI2 254 aa5.4□□□□□ -1.54
SMARCA1-204ENST00000478420 ZDHHC9Q9Y397 364 aa5.4□□□□□ -1.54
SMARCA1-204ENST00000478420 ADAMTS20P59510 1910 aa5.4□□□□□ -1.55
SMARCA1-204ENST00000478420 ELL2O00472 640 aaPredicted RBP5.39□□□□□ -1.55
SMARCA1-204ENST00000478420 NOBOXO60393 691 aa5.39□□□□□ -1.55
SMARCA1-204ENST00000478420 PRKD3O94806 890 aa5.39□□□□□ -1.55
SMARCA1-204ENST00000478420 HMGCRP04035 888 aa5.39□□□□□ -1.55
SMARCA1-204ENST00000478420 ETV4P43268 484 aa5.39□□□□□ -1.55
SMARCA1-204ENST00000478420 FAM50AQ14320 339 aaKnown RBP5.39□□□□□ -1.55
SMARCA1-204ENST00000478420 DGKDQ16760 1214 aa5.39□□□□□ -1.55
SMARCA1-204ENST00000478420 ZBTB41Q5SVQ8 909 aa5.39□□□□□ -1.55
SMARCA1-204ENST00000478420 BORAQ6PGQ7 559 aa5.39□□□□□ -1.55
SMARCA1-204ENST00000478420 UNQ6494/PRO21346Q6UXR6 183 aa5.39□□□□□ -1.55
SMARCA1-204ENST00000478420 SYT8Q8NBV8 401 aa5.39□□□□□ -1.55
SMARCA1-204ENST00000478420 OR5AN1Q8NGI8 311 aa5.39□□□□□ -1.55
SMARCA1-204ENST00000478420 ACAP3Q96P50 834 aa5.39□□□□□ -1.55
SMARCA1-204ENST00000478420 CARD11Q9BXL7 1154 aa5.39□□□□□ -1.55
SMARCA1-204ENST00000478420 WNT8AQ9H1J5 351 aa5.39□□□□□ -1.55
SMARCA1-204ENST00000478420 ZCCHC4Q9H5U6 513 aa5.39□□□□□ -1.55
SMARCA1-204ENST00000478420 SAE1Q9UBE0 346 aaPredicted RBP5.39□□□□□ -1.55
SMARCA1-204ENST00000478420 SYNPO2Q9UMS6 1093 aa5.39□□□□□ -1.55
SMARCA1-204ENST00000478420 GOLGA8AA7E2F4 631 aa5.38□□□□□ -1.55
SMARCA1-204ENST00000478420 GOLGA8BA8MQT2 603 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms