RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 CRY1Q16526 586 aa5.5□□□□□ -1.53
NCKAP1-204ENST00000477988 SYCE2Q6PIF2 218 aa5.5□□□□□ -1.53
NCKAP1-204ENST00000477988 MTDHQ86UE4 582 aaKnown RBP5.5□□□□□ -1.53
NCKAP1-204ENST00000477988 CELF2-AS1Q8N7Q2 184 aa5.5□□□□□ -1.53
NCKAP1-204ENST00000477988 PCDH19Q8TAB3 1148 aa5.5□□□□□ -1.53
NCKAP1-204ENST00000477988 ZNF669Q96BR6 464 aaPredicted RBP5.5□□□□□ -1.53
NCKAP1-204ENST00000477988 UCKL1Q9NWZ5 548 aa5.5□□□□□ -1.53
NCKAP1-204ENST00000477988 TRAF6Q9Y4K3 522 aa5.5□□□□□ -1.53
NCKAP1-204ENST00000477988 CTDP1Q9Y5B0 961 aaPredicted RBP5.5□□□□□ -1.53
NCKAP1-204ENST00000477988 A0A1W2PRX2 142 aa5.49□□□□□ -1.53
NCKAP1-204ENST00000477988 ZNF561-AS1K7EIQ3 104 aa5.49□□□□□ -1.53
NCKAP1-204ENST00000477988 ARVCFO00192 962 aa5.49□□□□□ -1.53
NCKAP1-204ENST00000477988 PYGMP11217 842 aa5.49□□□□□ -1.53
NCKAP1-204ENST00000477988 MAN2A2P49641 1150 aa5.49□□□□□ -1.53
NCKAP1-204ENST00000477988 JAM2P57087 298 aa5.49□□□□□ -1.53
NCKAP1-204ENST00000477988 SESN2P58004 480 aaPredicted RBP5.49□□□□□ -1.53
NCKAP1-204ENST00000477988 ST5P78524 1137 aa5.49□□□□□ -1.53
NCKAP1-204ENST00000477988 MBNL2Q5VZF2 373 aaKnown RBP5.49□□□□□ -1.53
NCKAP1-204ENST00000477988 LRSAM1Q6UWE0 723 aa5.49□□□□□ -1.53
NCKAP1-204ENST00000477988 HAS1Q92839 578 aa5.49□□□□□ -1.53
NCKAP1-204ENST00000477988 PTPRN2Q92932 1015 aa5.49□□□□□ -1.53
NCKAP1-204ENST00000477988 BBC3Q96PG8 261 aaPredicted RBP5.49□□□□□ -1.53
NCKAP1-204ENST00000477988 KIAA1522Q9P206 1035 aaPredicted RBP5.49□□□□□ -1.53
NCKAP1-204ENST00000477988 A0A0A6YYK5 440 aaPredicted RBP5.48□□□□□ -1.53
NCKAP1-204ENST00000477988 KRT15P19012 456 aa5.48□□□□□ -1.53
NCKAP1-204ENST00000477988 SCNN1GP51170 649 aa5.48□□□□□ -1.53
NCKAP1-204ENST00000477988 STAT5BP51692 787 aa5.48□□□□□ -1.53
NCKAP1-204ENST00000477988 LACTBP83111 547 aaPredicted RBP5.48□□□□□ -1.53
NCKAP1-204ENST00000477988 MAP3K12Q12852 859 aa5.48□□□□□ -1.53
NCKAP1-204ENST00000477988 TOB2Q14106 344 aaPredicted RBP5.48□□□□□ -1.53
NCKAP1-204ENST00000477988 FAM47CQ5HY64 1035 aa5.48□□□□□ -1.53
NCKAP1-204ENST00000477988 YOD1Q5VVQ6 348 aaPredicted RBP5.48□□□□□ -1.53
NCKAP1-204ENST00000477988 PAPD7Q5XG87 772 aaKnown RBP5.48□□□□□ -1.53
NCKAP1-204ENST00000477988 Q6ZRM9 215 aa5.48□□□□□ -1.53
NCKAP1-204ENST00000477988 MRGPREQ86SM8 312 aa5.48□□□□□ -1.53
NCKAP1-204ENST00000477988 GSPT2Q8IYD1 628 aaKnown RBP5.48□□□□□ -1.53
NCKAP1-204ENST00000477988 HNRNPLLQ8WVV9 542 aaKnown RBP5.48□□□□□ -1.53
NCKAP1-204ENST00000477988 SLC6A15Q9H2J7 730 aa5.48□□□□□ -1.53
NCKAP1-204ENST00000477988 NRDE2Q9H7Z3 1164 aa5.48□□□□□ -1.53
NCKAP1-204ENST00000477988 CBLCQ9ULV8 474 aa5.48□□□□□ -1.53
NCKAP1-204ENST00000477988 ADCY7P51828 1080 aa5.47□□□□□ -1.53
NCKAP1-204ENST00000477988 SAFB2Q14151 953 aaKnown RBP eCLIP5.47□□□□□ -1.53
NCKAP1-204ENST00000477988 KRTAP5-11Q6L8G4 156 aa5.47□□□□□ -1.53
NCKAP1-204ENST00000477988 KLHDC10Q6PID8 442 aa5.47□□□□□ -1.53
NCKAP1-204ENST00000477988 CALML6Q8TD86 181 aa5.47□□□□□ -1.53
NCKAP1-204ENST00000477988 LENG9Q96B70 501 aa5.47□□□□□ -1.53
NCKAP1-204ENST00000477988 RIOX1Q9H6W3 641 aa5.47□□□□□ -1.53
NCKAP1-204ENST00000477988 ASB1Q9Y576 335 aa5.47□□□□□ -1.53
NCKAP1-204ENST00000477988 PCDHA8Q9Y5H6 950 aa5.47□□□□□ -1.53
NCKAP1-204ENST00000477988 XDHP47989 1333 aa5.47□□□□□ -1.53
NCKAP1-204ENST00000477988 ZBTB7CA1YPR0 619 aa5.46□□□□□ -1.54
NCKAP1-204ENST00000477988 H2AFYO75367 372 aaKnown RBP5.46□□□□□ -1.54
NCKAP1-204ENST00000477988 RPS6KA4O75676 772 aa5.46□□□□□ -1.54
NCKAP1-204ENST00000477988 MMEP08473 750 aa5.46□□□□□ -1.54
NCKAP1-204ENST00000477988 ZNF37AP17032 561 aaPredicted RBP5.46□□□□□ -1.54
NCKAP1-204ENST00000477988 APEX1P27695 318 aaKnown RBP5.46□□□□□ -1.54
NCKAP1-204ENST00000477988 ARID5AQ03989 594 aa5.46□□□□□ -1.54
NCKAP1-204ENST00000477988 ANKS3Q6ZW76 656 aa5.46□□□□□ -1.54
NCKAP1-204ENST00000477988 SLC25A43Q8WUT9 341 aaPredicted RBP5.46□□□□□ -1.54
NCKAP1-204ENST00000477988 ASB15Q8WXK1 588 aa5.46□□□□□ -1.54
NCKAP1-204ENST00000477988 GFM2Q969S9 779 aaKnown RBP5.46□□□□□ -1.54
NCKAP1-204ENST00000477988 SLC7A6OSQ96CW6 309 aaPredicted RBP5.46□□□□□ -1.54
NCKAP1-204ENST00000477988 SMURF1Q9HCE7 757 aa5.46□□□□□ -1.54
NCKAP1-204ENST00000477988 KLF4O43474 513 aa5.45□□□□□ -1.54
NCKAP1-204ENST00000477988 PPFIA4O75335 1185 aa5.45□□□□□ -1.54
NCKAP1-204ENST00000477988 SMAD3P84022 425 aaKnown RBP5.45□□□□□ -1.54
NCKAP1-204ENST00000477988 ATP2C1P98194 919 aaPredicted RBP5.45□□□□□ -1.54
NCKAP1-204ENST00000477988 GUCY1A3Q02108 690 aa5.45□□□□□ -1.54
NCKAP1-204ENST00000477988 ADAM15Q13444 863 aa5.45□□□□□ -1.54
NCKAP1-204ENST00000477988 GAREM2Q75VX8 874 aa5.45□□□□□ -1.54
NCKAP1-204ENST00000477988 RHOUQ7L0Q8 258 aa5.45□□□□□ -1.54
NCKAP1-204ENST00000477988 BCL6BQ8N143 479 aaPredicted RBP5.45□□□□□ -1.54
NCKAP1-204ENST00000477988 KCNH7Q9NS40 1196 aa5.45□□□□□ -1.54
NCKAP1-204ENST00000477988 ZNHIT2Q9UHR6 403 aa5.45□□□□□ -1.54
NCKAP1-204ENST00000477988 PACSIN3Q9UKS6 424 aa5.45□□□□□ -1.54
NCKAP1-204ENST00000477988 CCDC66A2RUB6 948 aa5.44□□□□□ -1.54
NCKAP1-204ENST00000477988 ERCC5P28715 1186 aaPredicted RBP5.44□□□□□ -1.54
NCKAP1-204ENST00000477988 SDHAP31040 664 aa5.44□□□□□ -1.54
NCKAP1-204ENST00000477988 KRTAP10-7P60409 375 aaPredicted RBP5.44□□□□□ -1.54
NCKAP1-204ENST00000477988 SUMO1P63165 101 aaKnown RBP5.44□□□□□ -1.54
NCKAP1-204ENST00000477988 SEC23AQ15436 765 aa5.44□□□□□ -1.54
NCKAP1-204ENST00000477988 FAM111BQ6SJ93 734 aa5.44□□□□□ -1.54
NCKAP1-204ENST00000477988 HTR3DQ70Z44 454 aa5.44□□□□□ -1.54
NCKAP1-204ENST00000477988 MCF2L2Q86YR7 1114 aa5.44□□□□□ -1.54
NCKAP1-204ENST00000477988 GBP4Q96PP9 640 aa5.44□□□□□ -1.54
NCKAP1-204ENST00000477988 SPATA9Q9BWV2 254 aa5.44□□□□□ -1.54
NCKAP1-204ENST00000477988 GPR87Q9BY21 358 aa5.44□□□□□ -1.54
NCKAP1-204ENST00000477988 PRAMEF22A3QJZ6 481 aa5.43□□□□□ -1.54
NCKAP1-204ENST00000477988 ZAR1LA6NP61 321 aa5.43□□□□□ -1.54
NCKAP1-204ENST00000477988 GOLGA6L22H0YM25 854 aa5.43□□□□□ -1.54
NCKAP1-204ENST00000477988 FOXP2O15409 715 aa5.43□□□□□ -1.54
NCKAP1-204ENST00000477988 SRGAP2CP0DJJ0 459 aa5.43□□□□□ -1.54
NCKAP1-204ENST00000477988 ELAVL1Q15717 326 aaKnown RBP5.43□□□□□ -1.54
NCKAP1-204ENST00000477988 GAGE13Q4V321 117 aa5.43□□□□□ -1.54
NCKAP1-204ENST00000477988 RABL3Q5HYI8 236 aa5.43□□□□□ -1.54
NCKAP1-204ENST00000477988 ADGRG3Q86Y34 549 aa5.43□□□□□ -1.54
NCKAP1-204ENST00000477988 VRK3Q8IV63 474 aa5.43□□□□□ -1.54
NCKAP1-204ENST00000477988 NOSTRINQ8IVI9 506 aa5.43□□□□□ -1.54
NCKAP1-204ENST00000477988 SYNE4Q8N205 404 aa5.43□□□□□ -1.54
NCKAP1-204ENST00000477988 HIPK4Q8NE63 616 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms