RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 LRRN2O75325 713 aa11.17□□□□□ -0.62
SMARCB1-206ENST00000477836 STAM2O75886 525 aa11.17□□□□□ -0.62
SMARCB1-206ENST00000477836 POLR2MP0CAP2 368 aa11.17□□□□□ -0.62
SMARCB1-206ENST00000477836 INSRRP14616 1297 aa11.17□□□□□ -0.62
SMARCB1-206ENST00000477836 KCNA4P22459 653 aa11.17□□□□□ -0.62
SMARCB1-206ENST00000477836 HAND2P61296 217 aa11.17□□□□□ -0.62
SMARCB1-206ENST00000477836 KRT76Q01546 638 aa11.17□□□□□ -0.62
SMARCB1-206ENST00000477836 BMS1Q14692 1282 aaKnown RBP11.17□□□□□ -0.62
SMARCB1-206ENST00000477836 NONOQ15233 471 aaKnown RBP eCLIP11.17□□□□□ -0.62
SMARCB1-206ENST00000477836 ZNF528Q3MIS6 628 aa11.17□□□□□ -0.62
SMARCB1-206ENST00000477836 GPR149Q86SP6 731 aa11.17□□□□□ -0.62
SMARCB1-206ENST00000477836 SAMD3Q8N6K7 520 aa11.17□□□□□ -0.62
SMARCB1-206ENST00000477836 GPR152Q8TDT2 470 aa11.17□□□□□ -0.62
SMARCB1-206ENST00000477836 ATRIPQ8WXE1 791 aa11.17□□□□□ -0.62
SMARCB1-206ENST00000477836 AUTS2Q8WXX7 1259 aa11.17□□□□□ -0.62
SMARCB1-206ENST00000477836 BORCS6Q96GS4 357 aa11.17□□□□□ -0.62
SMARCB1-206ENST00000477836 KAT14Q9H8E8 782 aa11.17□□□□□ -0.62
SMARCB1-206ENST00000477836 TMEM161AQ9NX61 479 aa11.17□□□□□ -0.62
SMARCB1-206ENST00000477836 ANGPTL2Q9UKU9 493 aa11.17□□□□□ -0.62
SMARCB1-206ENST00000477836 SMG5Q9UPR3 1016 aaKnown RBP11.17□□□□□ -0.62
SMARCB1-206ENST00000477836 GINS2Q9Y248 185 aa11.17□□□□□ -0.62
SMARCB1-206ENST00000477836 NOC2LQ9Y3T9 749 aaKnown RBP11.17□□□□□ -0.62
SMARCB1-206ENST00000477836 CACNA1IQ9P0X4 2223 aa11.17□□□□□ -0.62
SMARCB1-206ENST00000477836 NBEAQ8NFP9 2946 aa11.16□□□□□ -0.62
SMARCB1-206ENST00000477836 KDM3AQ9Y4C1 1321 aa11.16□□□□□ -0.62
SMARCB1-206ENST00000477836 GSTTP1A0A1W2PQM5 241 aa11.16□□□□□ -0.62
SMARCB1-206ENST00000477836 RRN3P2A6NIE6 340 aa11.16□□□□□ -0.62
SMARCB1-206ENST00000477836 RPS6KA5O75582 802 aa11.16□□□□□ -0.62
SMARCB1-206ENST00000477836 FGAP02671 866 aa11.16□□□□□ -0.62
SMARCB1-206ENST00000477836 PARP1P09874 1014 aaKnown RBP11.16□□□□□ -0.62
SMARCB1-206ENST00000477836 SRFP11831 508 aa11.16□□□□□ -0.62
SMARCB1-206ENST00000477836 MX1P20591 662 aa11.16□□□□□ -0.62
SMARCB1-206ENST00000477836 TGM1P22735 817 aa11.16□□□□□ -0.62
SMARCB1-206ENST00000477836 ALX1Q15699 326 aa11.16□□□□□ -0.62
SMARCB1-206ENST00000477836 LETM2Q2VYF4 491 aa11.16□□□□□ -0.62
SMARCB1-206ENST00000477836 MFSD6Q6ZSS7 791 aa11.16□□□□□ -0.62
SMARCB1-206ENST00000477836 DGKHQ86XP1 1220 aa11.16□□□□□ -0.62
SMARCB1-206ENST00000477836 LRRC43Q8N309 656 aa11.16□□□□□ -0.62
SMARCB1-206ENST00000477836 SLC44A3Q8N4M1 653 aa11.16□□□□□ -0.62
SMARCB1-206ENST00000477836 PJA1Q8NG27 643 aa11.16□□□□□ -0.62
SMARCB1-206ENST00000477836 TRAPPC12Q8WVT3 735 aa11.16□□□□□ -0.62
SMARCB1-206ENST00000477836 SEPT1Q8WYJ6 367 aa11.16□□□□□ -0.62
SMARCB1-206ENST00000477836 CASD1Q96PB1 797 aa11.16□□□□□ -0.62
SMARCB1-206ENST00000477836 SENP7Q9BQF6 1050 aa11.16□□□□□ -0.62
SMARCB1-206ENST00000477836 FOXQ1Q9C009 403 aa11.16□□□□□ -0.62
SMARCB1-206ENST00000477836 TMEM117Q9H0C3 514 aa11.16□□□□□ -0.62
SMARCB1-206ENST00000477836 SMARCAD1Q9H4L7 1026 aa11.16□□□□□ -0.62
SMARCB1-206ENST00000477836 SFXN1Q9H9B4 322 aa11.16□□□□□ -0.62
SMARCB1-206ENST00000477836 PARD6AQ9NPB6 346 aa11.16□□□□□ -0.62
SMARCB1-206ENST00000477836 ARHGEF3Q9NR81 526 aa11.16□□□□□ -0.62
SMARCB1-206ENST00000477836 SPATA6Q9NWH7 488 aaPredicted RBP11.16□□□□□ -0.62
SMARCB1-206ENST00000477836 ST3GAL5Q9UNP4 418 aa11.16□□□□□ -0.62
SMARCB1-206ENST00000477836 PCDHA2Q9Y5H9 948 aa11.16□□□□□ -0.62
SMARCB1-206ENST00000477836 NT5C1B-RDH14C9J2C7 533 aa11.15□□□□□ -0.62
SMARCB1-206ENST00000477836 LAMTOR5O43504 91 aa11.15□□□□□ -0.62
SMARCB1-206ENST00000477836 N4BP1O75113 896 aaKnown RBP11.15□□□□□ -0.62
SMARCB1-206ENST00000477836 GBP2P32456 591 aaPredicted RBP11.15□□□□□ -0.62
SMARCB1-206ENST00000477836 CSTF1Q05048 431 aaKnown RBP11.15□□□□□ -0.62
SMARCB1-206ENST00000477836 PTPN14Q15678 1187 aa11.15□□□□□ -0.62
SMARCB1-206ENST00000477836 DCLRE1AQ6PJP8 1040 aa11.15□□□□□ -0.62
SMARCB1-206ENST00000477836 ABI1Q8IZP0 508 aa11.15□□□□□ -0.62
SMARCB1-206ENST00000477836 SLC39A11Q8N1S5 342 aa11.15□□□□□ -0.62
SMARCB1-206ENST00000477836 NME8Q8N427 588 aa11.15□□□□□ -0.62
SMARCB1-206ENST00000477836 GIMAP8Q8ND71 665 aaPredicted RBP11.15□□□□□ -0.62
SMARCB1-206ENST00000477836 OTUD7AQ8TE49 926 aaPredicted RBP11.15□□□□□ -0.62
SMARCB1-206ENST00000477836 SLC22A17Q8WUG5 538 aa11.15□□□□□ -0.62
SMARCB1-206ENST00000477836 EPC1Q9H2F5 836 aa11.15□□□□□ -0.62
SMARCB1-206ENST00000477836 ELAC1Q9H777 363 aaKnown RBP11.15□□□□□ -0.62
SMARCB1-206ENST00000477836 FBXO4Q9UKT5 387 aa11.15□□□□□ -0.62
SMARCB1-206ENST00000477836 PCDHGA2Q9Y5H1 932 aa11.15□□□□□ -0.62
SMARCB1-206ENST00000477836 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.15□□□□□ -0.62
SMARCB1-206ENST00000477836 C2orf16Q68DN1 1984 aa11.15□□□□□ -0.62
SMARCB1-206ENST00000477836 SETXQ7Z333 2677 aaKnown RBP11.15□□□□□ -0.62
SMARCB1-206ENST00000477836 FASNP49327 2511 aaKnown RBP11.14□□□□□ -0.63
SMARCB1-206ENST00000477836 SALL3Q9BXA9 1300 aa11.14□□□□□ -0.63
SMARCB1-206ENST00000477836 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.14□□□□□ -0.63
SMARCB1-206ENST00000477836 SLC30A4O14863 429 aa11.14□□□□□ -0.63
SMARCB1-206ENST00000477836 ZBTB5O15062 677 aa11.14□□□□□ -0.63
SMARCB1-206ENST00000477836 GPR182O15218 404 aa11.14□□□□□ -0.63
SMARCB1-206ENST00000477836 HOXA2O43364 376 aa11.14□□□□□ -0.63
SMARCB1-206ENST00000477836 ATP9AO75110 1047 aa11.14□□□□□ -0.63
SMARCB1-206ENST00000477836 METAP2P50579 478 aaKnown RBP eCLIP11.14□□□□□ -0.63
SMARCB1-206ENST00000477836 FAM189BP81408 668 aa11.14□□□□□ -0.63
SMARCB1-206ENST00000477836 PLCB4Q15147 1175 aa11.14□□□□□ -0.63
SMARCB1-206ENST00000477836 ODR4Q5SWX8 454 aa11.14□□□□□ -0.63
SMARCB1-206ENST00000477836 HOMER1Q86YM7 354 aa11.14□□□□□ -0.63
SMARCB1-206ENST00000477836 PLEKHM2Q8IWE5 1019 aa11.14□□□□□ -0.63
SMARCB1-206ENST00000477836 VPS52Q8N1B4 723 aa11.14□□□□□ -0.63
SMARCB1-206ENST00000477836 STAG2Q8N3U4 1231 aa11.14□□□□□ -0.63
SMARCB1-206ENST00000477836 NETO1Q8TDF5 533 aa11.14□□□□□ -0.63
SMARCB1-206ENST00000477836 TMEM40Q8WWA1 233 aa11.14□□□□□ -0.63
SMARCB1-206ENST00000477836 ESR2Q92731 530 aa11.14□□□□□ -0.63
SMARCB1-206ENST00000477836 TMEM169Q96HH4 297 aa11.14□□□□□ -0.63
SMARCB1-206ENST00000477836 ZBP1Q9H171 429 aa11.14□□□□□ -0.63
SMARCB1-206ENST00000477836 CDHR5Q9HBB8 845 aa11.14□□□□□ -0.63
SMARCB1-206ENST00000477836 GMEB2Q9UKD1 530 aa11.14□□□□□ -0.63
SMARCB1-206ENST00000477836 FRMPD4Q14CM0 1322 aa11.13□□□□□ -0.63
SMARCB1-206ENST00000477836 SMIM35A0A1B0GVV1 85 aa11.13□□□□□ -0.63
SMARCB1-206ENST00000477836 PDE1AP54750 535 aa11.13□□□□□ -0.63
SMARCB1-206ENST00000477836 SPEM2Q0P670 501 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms