RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 SRBD1Q8N5C6 995 aaKnown RBP23.12■■□□□ 1.29
PDLIM1-202ENST00000477757 LY9Q9HBG7 655 aa23.12■■□□□ 1.29
PDLIM1-202ENST00000477757 IGKV6D-21A0A0A0MT36 114 aa23.11■■□□□ 1.29
PDLIM1-202ENST00000477757 HBP1O60381 514 aa23.11■■□□□ 1.29
PDLIM1-202ENST00000477757 ATG7O95352 703 aa23.11■■□□□ 1.29
PDLIM1-202ENST00000477757 PBX3P40426 434 aa23.11■■□□□ 1.29
PDLIM1-202ENST00000477757 GNAQP50148 359 aa23.11■■□□□ 1.29
PDLIM1-202ENST00000477757 KRT17Q04695 432 aa23.11■■□□□ 1.29
PDLIM1-202ENST00000477757 DSC3Q14574 896 aa23.11■■□□□ 1.29
PDLIM1-202ENST00000477757 SMC1AQ14683 1233 aaKnown RBP23.11■■□□□ 1.29
PDLIM1-202ENST00000477757 LRRC55Q6ZSA7 311 aa23.11■■□□□ 1.29
PDLIM1-202ENST00000477757 TMC7Q7Z402 723 aa23.11■■□□□ 1.29
PDLIM1-202ENST00000477757 ZDHHC14Q8IZN3 488 aa23.11■■□□□ 1.29
PDLIM1-202ENST00000477757 TDRD5Q8NAT2 981 aaKnown RBP23.11■■□□□ 1.29
PDLIM1-202ENST00000477757 CYP2W1Q8TAV3 490 aa23.11■■□□□ 1.29
PDLIM1-202ENST00000477757 CASD1Q96PB1 797 aa23.11■■□□□ 1.29
PDLIM1-202ENST00000477757 MFSD1Q9H3U5 465 aa23.11■■□□□ 1.29
PDLIM1-202ENST00000477757 RNF19AQ9NV58 838 aa23.11■■□□□ 1.29
PDLIM1-202ENST00000477757 ASGR2P07307 311 aa23.1■■□□□ 1.29
PDLIM1-202ENST00000477757 CRYBB1P53674 252 aaPredicted RBP23.1■■□□□ 1.29
PDLIM1-202ENST00000477757 PTH1RQ03431 593 aa23.1■■□□□ 1.29
PDLIM1-202ENST00000477757 KIZQ2M2Z5 673 aa23.1■■□□□ 1.29
PDLIM1-202ENST00000477757 ADSSL1Q8N142 457 aa23.1■■□□□ 1.29
PDLIM1-202ENST00000477757 MRPL43Q8N983 215 aaKnown RBP23.1■■□□□ 1.29
PDLIM1-202ENST00000477757 OSMRQ99650 979 aa23.1■■□□□ 1.29
PDLIM1-202ENST00000477757 RWDD1Q9H446 243 aaPredicted RBP23.1■■□□□ 1.29
PDLIM1-202ENST00000477757 SPG21Q9NZD8 308 aa23.1■■□□□ 1.29
PDLIM1-202ENST00000477757 C2orf71A6NGG8 1288 aa23.09■■□□□ 1.29
PDLIM1-202ENST00000477757 ZBTB42B2RXF5 422 aa23.09■■□□□ 1.29
PDLIM1-202ENST00000477757 CWF19L1Q69YN2 538 aaKnown RBP23.09■■□□□ 1.29
PDLIM1-202ENST00000477757 AGO4Q9HCK5 861 aaKnown RBP23.09■■□□□ 1.29
PDLIM1-202ENST00000477757 MYO10Q9HD67 2058 aa23.09■■□□□ 1.29
PDLIM1-202ENST00000477757 CLASP2O75122 1294 aaKnown RBP23.08■■□□□ 1.29
PDLIM1-202ENST00000477757 CCNE2O96020 404 aa23.08■■□□□ 1.29
PDLIM1-202ENST00000477757 ARP10275 920 aa23.08■■□□□ 1.29
PDLIM1-202ENST00000477757 AAMPQ13685 434 aa23.08■■□□□ 1.29
PDLIM1-202ENST00000477757 ZNF484Q5JVG2 852 aa23.08■■□□□ 1.29
PDLIM1-202ENST00000477757 FAM160B1Q5W0V3 765 aa23.08■■□□□ 1.29
PDLIM1-202ENST00000477757 KIAA1841Q6NSI8 718 aa23.08■■□□□ 1.29
PDLIM1-202ENST00000477757 ABI1Q8IZP0 508 aa23.08■■□□□ 1.29
PDLIM1-202ENST00000477757 PPP1R16BQ96T49 567 aa23.08■■□□□ 1.29
PDLIM1-202ENST00000477757 USTQ9Y2C2 406 aa23.08■■□□□ 1.29
PDLIM1-202ENST00000477757 DENND4AQ7Z401 1863 aa23.08■■□□□ 1.29
PDLIM1-202ENST00000477757 BACH1O14867 736 aa23.07■■□□□ 1.28
PDLIM1-202ENST00000477757 C22orf31O95567 290 aa23.07■■□□□ 1.28
PDLIM1-202ENST00000477757 CEP55Q53EZ4 464 aa23.07■■□□□ 1.28
PDLIM1-202ENST00000477757 ABHD15Q6UXT9 468 aa23.07■■□□□ 1.28
PDLIM1-202ENST00000477757 CCDC60Q8IWA6 550 aaPredicted RBP23.07■■□□□ 1.28
PDLIM1-202ENST00000477757 CMTR1Q8N1G2 835 aaKnown RBP23.07■■□□□ 1.28
PDLIM1-202ENST00000477757 SLC39A11Q8N1S5 342 aa23.07■■□□□ 1.28
PDLIM1-202ENST00000477757 MTA3Q9BTC8 594 aa23.07■■□□□ 1.28
PDLIM1-202ENST00000477757 DZANK1Q9NVP4 752 aa23.07■■□□□ 1.28
PDLIM1-202ENST00000477757 hCG_1642624A0A1W2PR95 340 aa23.06■■□□□ 1.28
PDLIM1-202ENST00000477757 GPR32O75388 356 aa23.06■■□□□ 1.28
PDLIM1-202ENST00000477757 WEE2P0C1S8 567 aa23.06■■□□□ 1.28
PDLIM1-202ENST00000477757 RARS2Q5T160 578 aaKnown RBP23.06■■□□□ 1.28
PDLIM1-202ENST00000477757 HEATR3Q7Z4Q2 680 aa23.06■■□□□ 1.28
PDLIM1-202ENST00000477757 PLCD3Q8N3E9 789 aa23.06■■□□□ 1.28
PDLIM1-202ENST00000477757 LIMD1Q9UGP4 676 aa23.06■■□□□ 1.28
PDLIM1-202ENST00000477757 FRYLO94915 3013 aa23.06■■□□□ 1.28
PDLIM1-202ENST00000477757 VTNP04004 478 aa23.05■■□□□ 1.28
PDLIM1-202ENST00000477757 AOC1P19801 751 aa23.05■■□□□ 1.28
PDLIM1-202ENST00000477757 PDXDC2PQ6P474 469 aa23.05■■□□□ 1.28
PDLIM1-202ENST00000477757 TEX2Q8IWB9 1127 aa23.05■■□□□ 1.28
PDLIM1-202ENST00000477757 CCDC105Q8IYK2 499 aa23.05■■□□□ 1.28
PDLIM1-202ENST00000477757 RUFY2Q8WXA3 655 aa23.05■■□□□ 1.28
PDLIM1-202ENST00000477757 EVPLQ92817 2033 aa23.04■■□□□ 1.28
PDLIM1-202ENST00000477757 MEIS1O00470 390 aa23.04■■□□□ 1.28
PDLIM1-202ENST00000477757 RXRAP19793 462 aa23.04■■□□□ 1.28
PDLIM1-202ENST00000477757 CLLU1OSQ5K130 101 aa23.04■■□□□ 1.28
PDLIM1-202ENST00000477757 CASC1Q6TDU7 716 aa23.04■■□□□ 1.28
PDLIM1-202ENST00000477757 ECHDC2Q86YB7 292 aa23.04■■□□□ 1.28
PDLIM1-202ENST00000477757 C12orf76Q8N812 135 aaPredicted RBP23.04■■□□□ 1.28
PDLIM1-202ENST00000477757 FLCNQ8NFG4 579 aa23.04■■□□□ 1.28
PDLIM1-202ENST00000477757 ZNF302Q9NR11 478 aa23.04■■□□□ 1.28
PDLIM1-202ENST00000477757 DBR1Q9UK59 544 aaKnown RBP23.04■■□□□ 1.28
PDLIM1-202ENST00000477757 EP300Q09472 2414 aaPredicted RBP23.04■■□□□ 1.28
PDLIM1-202ENST00000477757 DDX39AO00148 427 aaKnown RBP23.03■■□□□ 1.28
PDLIM1-202ENST00000477757 SH2B2O14492 632 aaPredicted RBP23.03■■□□□ 1.28
PDLIM1-202ENST00000477757 PRC1O43663 620 aa23.03■■□□□ 1.28
PDLIM1-202ENST00000477757 EOMESO95936 686 aa23.03■■□□□ 1.28
PDLIM1-202ENST00000477757 IGHDP01880 384 aa23.03■■□□□ 1.28
PDLIM1-202ENST00000477757 CALM1P0DP23 149 aa23.03■■□□□ 1.28
PDLIM1-202ENST00000477757 CALM2P0DP24 149 aa23.03■■□□□ 1.28
PDLIM1-202ENST00000477757 CALM3P0DP25 149 aa23.03■■□□□ 1.28
PDLIM1-202ENST00000477757 GSPT1P15170 499 aaKnown RBP23.03■■□□□ 1.28
PDLIM1-202ENST00000477757 ATAT1Q5SQI0 421 aa23.03■■□□□ 1.28
PDLIM1-202ENST00000477757 NFXL1Q6ZNB6 911 aa23.03■■□□□ 1.28
PDLIM1-202ENST00000477757 TMTC3Q6ZXV5 915 aa23.03■■□□□ 1.28
PDLIM1-202ENST00000477757 PGBD1Q96JS3 809 aa23.03■■□□□ 1.28
PDLIM1-202ENST00000477757 CCDC69A6NI79 296 aa23.02■■□□□ 1.28
PDLIM1-202ENST00000477757 FOSP01100 380 aaPredicted RBP23.02■■□□□ 1.28
PDLIM1-202ENST00000477757 NPR3P17342 541 aa23.02■■□□□ 1.28
PDLIM1-202ENST00000477757 ATP4AP20648 1035 aa23.02■■□□□ 1.28
PDLIM1-202ENST00000477757 BMS1Q14692 1282 aaKnown RBP23.02■■□□□ 1.28
PDLIM1-202ENST00000477757 ANGPT1Q15389 498 aa23.02■■□□□ 1.28
PDLIM1-202ENST00000477757 NIPA1Q7RTP0 329 aa23.02■■□□□ 1.28
PDLIM1-202ENST00000477757 TMTC2Q8N394 836 aa23.02■■□□□ 1.28
PDLIM1-202ENST00000477757 ANO3Q9BYT9 981 aa23.02■■□□□ 1.28
PDLIM1-202ENST00000477757 ZBP1Q9H171 429 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms