RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 TMX3Q96JJ7 454 aa15.89■□□□□ 0.13
PDE6D-204ENST00000477748 UHRF1Q96T88 793 aaPredicted RBP15.89■□□□□ 0.13
PDE6D-204ENST00000477748 SUGCTQ9HAC7 445 aa15.89■□□□□ 0.13
PDE6D-204ENST00000477748 VAV3Q9UKW4 847 aa15.89■□□□□ 0.13
PDE6D-204ENST00000477748 MTUS1Q9ULD2 1270 aa15.89■□□□□ 0.13
PDE6D-204ENST00000477748 COL4A4P53420 1690 aaPredicted RBP15.89■□□□□ 0.13
PDE6D-204ENST00000477748 EML1O00423 815 aa15.88■□□□□ 0.13
PDE6D-204ENST00000477748 CD2BP2O95400 341 aaKnown RBP15.88■□□□□ 0.13
PDE6D-204ENST00000477748 C22orf31O95567 290 aa15.88■□□□□ 0.13
PDE6D-204ENST00000477748 ATP2B1P20020 1258 aa15.88■□□□□ 0.13
PDE6D-204ENST00000477748 PPP2R5CQ13362 524 aa15.88■□□□□ 0.13
PDE6D-204ENST00000477748 GNL2Q13823 731 aaKnown RBP15.88■□□□□ 0.13
PDE6D-204ENST00000477748 LPIN1Q14693 890 aa15.88■□□□□ 0.13
PDE6D-204ENST00000477748 FBXO47Q5MNV8 452 aa15.88■□□□□ 0.13
PDE6D-204ENST00000477748 TSHZ1Q6ZSZ6 1077 aa15.88■□□□□ 0.13
PDE6D-204ENST00000477748 METTL13Q8N6R0 699 aa15.88■□□□□ 0.13
PDE6D-204ENST00000477748 FBXO22Q8NEZ5 403 aa15.88■□□□□ 0.13
PDE6D-204ENST00000477748 HLA-CQ95604 372 aa15.88■□□□□ 0.13
PDE6D-204ENST00000477748 BACH2Q9BYV9 841 aa15.88■□□□□ 0.13
PDE6D-204ENST00000477748 CELF4Q9BZC1 486 aaKnown RBP15.88■□□□□ 0.13
PDE6D-204ENST00000477748 MAGEB2O15479 319 aa15.87■□□□□ 0.13
PDE6D-204ENST00000477748 CALCRLQ16602 461 aa15.87■□□□□ 0.13
PDE6D-204ENST00000477748 NCAPH2Q6IBW4 605 aa15.87■□□□□ 0.13
PDE6D-204ENST00000477748 KIAA0319LQ8IZA0 1049 aa15.87■□□□□ 0.13
PDE6D-204ENST00000477748 BANK1Q8NDB2 785 aa15.87■□□□□ 0.13
PDE6D-204ENST00000477748 C17orf80Q9BSJ5 609 aa15.87■□□□□ 0.13
PDE6D-204ENST00000477748 FOXP1Q9H334 677 aaPredicted RBP15.87■□□□□ 0.13
PDE6D-204ENST00000477748 SEPT9Q9UHD8 586 aaPredicted RBP15.87■□□□□ 0.13
PDE6D-204ENST00000477748 GINS2Q9Y248 185 aa15.87■□□□□ 0.13
PDE6D-204ENST00000477748 KIF3AQ9Y496 699 aa15.87■□□□□ 0.13
PDE6D-204ENST00000477748 SQORQ9Y6N5 450 aa15.87■□□□□ 0.13
PDE6D-204ENST00000477748 WNT7AO00755 349 aa15.86■□□□□ 0.13
PDE6D-204ENST00000477748 NEMFO60524 1076 aa15.86■□□□□ 0.13
PDE6D-204ENST00000477748 PSMC5P62195 406 aa15.86■□□□□ 0.13
PDE6D-204ENST00000477748 TFF2Q03403 129 aa15.86■□□□□ 0.13
PDE6D-204ENST00000477748 EPHA7Q15375 998 aa15.86■□□□□ 0.13
PDE6D-204ENST00000477748 PTPROQ16827 1216 aa15.86■□□□□ 0.13
PDE6D-204ENST00000477748 MTERF2Q49AM1 385 aa15.86■□□□□ 0.13
PDE6D-204ENST00000477748 XKR3Q5GH77 459 aa15.86■□□□□ 0.13
PDE6D-204ENST00000477748 EFCAB12Q6NXP0 572 aa15.86■□□□□ 0.13
PDE6D-204ENST00000477748 FAM43BQ6ZT52 329 aaPredicted RBP15.86■□□□□ 0.13
PDE6D-204ENST00000477748 FTHL17Q9BXU8 183 aa15.86■□□□□ 0.13
PDE6D-204ENST00000477748 AGO3Q9H9G7 860 aaKnown RBP15.86■□□□□ 0.13
PDE6D-204ENST00000477748 KDM3AQ9Y4C1 1321 aa15.86■□□□□ 0.13
PDE6D-204ENST00000477748 DDX11L8A8MPP1 907 aa15.85■□□□□ 0.13
PDE6D-204ENST00000477748 DKC1O60832 514 aaKnown RBP eCLIP15.85■□□□□ 0.13
PDE6D-204ENST00000477748 UPP2O95045 317 aa15.85■□□□□ 0.13
PDE6D-204ENST00000477748 P4HBP07237 508 aaKnown RBP15.85■□□□□ 0.13
PDE6D-204ENST00000477748 BMP1P13497 986 aa15.85■□□□□ 0.13
PDE6D-204ENST00000477748 TMOD1P28289 359 aa15.85■□□□□ 0.13
PDE6D-204ENST00000477748 CD52P31358 61 aa15.85■□□□□ 0.13
PDE6D-204ENST00000477748 QARSP47897 775 aaKnown RBP15.85■□□□□ 0.13
PDE6D-204ENST00000477748 CLCN3P51790 818 aa15.85■□□□□ 0.13
PDE6D-204ENST00000477748 TBC1D8BQ0IIM8 1120 aa15.85■□□□□ 0.13
PDE6D-204ENST00000477748 EPC2Q52LR7 807 aa15.85■□□□□ 0.13
PDE6D-204ENST00000477748 LRRC71Q8N4P6 559 aa15.85■□□□□ 0.13
PDE6D-204ENST00000477748 MAP7D2Q96T17 732 aa15.85■□□□□ 0.13
PDE6D-204ENST00000477748 PPP1R16BQ96T49 567 aa15.85■□□□□ 0.13
PDE6D-204ENST00000477748 NIFKQ9BYG3 293 aaKnown RBP15.85■□□□□ 0.13
PDE6D-204ENST00000477748 PCDHA12Q9UN75 941 aa15.85■□□□□ 0.13
PDE6D-204ENST00000477748 RWDD3Q9Y3V2 267 aa15.85■□□□□ 0.13
PDE6D-204ENST00000477748 TMEM150BA6NC51 233 aa15.84■□□□□ 0.13
PDE6D-204ENST00000477748 STBD1O95210 358 aa15.84■□□□□ 0.13
PDE6D-204ENST00000477748 VTNP04004 478 aa15.84■□□□□ 0.13
PDE6D-204ENST00000477748 MCM7P33993 719 aa15.84■□□□□ 0.13
PDE6D-204ENST00000477748 TXKP42681 527 aa15.84■□□□□ 0.13
PDE6D-204ENST00000477748 KCNQ1P51787 676 aa15.84■□□□□ 0.13
PDE6D-204ENST00000477748 PAK2Q13177 524 aa15.84■□□□□ 0.13
PDE6D-204ENST00000477748 TARBP2Q15633 366 aaKnown RBP15.84■□□□□ 0.13
PDE6D-204ENST00000477748 TIGD5Q53EQ6 642 aa15.84■□□□□ 0.13
PDE6D-204ENST00000477748 NOSTRINQ8IVI9 506 aa15.84■□□□□ 0.13
PDE6D-204ENST00000477748 TMEM192Q8IY95 271 aa15.84■□□□□ 0.13
PDE6D-204ENST00000477748 MRPL38Q96DV4 380 aaKnown RBP15.84■□□□□ 0.13
PDE6D-204ENST00000477748 SH2D3AQ9BRG2 576 aa15.84■□□□□ 0.13
PDE6D-204ENST00000477748 TTC12Q9H892 705 aaPredicted RBP15.84■□□□□ 0.13
PDE6D-204ENST00000477748 CDHR5Q9HBB8 845 aa15.84■□□□□ 0.13
PDE6D-204ENST00000477748 NOL7Q9UMY1 257 aaKnown RBP15.84■□□□□ 0.13
PDE6D-204ENST00000477748 AKT3Q9Y243 479 aa15.84■□□□□ 0.13
PDE6D-204ENST00000477748 ADGRA3Q8IWK6 1321 aa15.84■□□□□ 0.13
PDE6D-204ENST00000477748 H3BNC9 293 aa15.83■□□□□ 0.12
PDE6D-204ENST00000477748 ENPP3O14638 875 aa15.83■□□□□ 0.12
PDE6D-204ENST00000477748 GJB2P29033 226 aa15.83■□□□□ 0.12
PDE6D-204ENST00000477748 SPIRE1Q08AE8 756 aa15.83■□□□□ 0.12
PDE6D-204ENST00000477748 NFX1Q12986 1120 aaKnown RBP15.83■□□□□ 0.12
PDE6D-204ENST00000477748 ZNF174Q15697 407 aa15.83■□□□□ 0.12
PDE6D-204ENST00000477748 KIZQ2M2Z5 673 aa15.83■□□□□ 0.12
PDE6D-204ENST00000477748 TTC38Q5R3I4 469 aa15.83■□□□□ 0.12
PDE6D-204ENST00000477748 FIBCD1Q8N539 461 aa15.83■□□□□ 0.12
PDE6D-204ENST00000477748 LINC01465Q8N7H1 131 aa15.83■□□□□ 0.12
PDE6D-204ENST00000477748 DYDC2Q96IM9 177 aa15.83■□□□□ 0.12
PDE6D-204ENST00000477748 MTMR9Q96QG7 549 aa15.83■□□□□ 0.12
PDE6D-204ENST00000477748 OSMRQ99650 979 aa15.83■□□□□ 0.12
PDE6D-204ENST00000477748 LXNQ9BS40 222 aa15.83■□□□□ 0.12
PDE6D-204ENST00000477748 TMEM60Q9H2L4 133 aa15.83■□□□□ 0.12
PDE6D-204ENST00000477748 RC3H2Q9HBD1 1191 aaKnown RBP15.83■□□□□ 0.12
PDE6D-204ENST00000477748 RGL1Q9NZL6 768 aa15.83■□□□□ 0.12
PDE6D-204ENST00000477748 PADI3Q9ULW8 664 aa15.83■□□□□ 0.12
PDE6D-204ENST00000477748 SMC3Q9UQE7 1217 aa15.83■□□□□ 0.12
PDE6D-204ENST00000477748 C5orf67F2Z3F1 127 aa15.82■□□□□ 0.12
PDE6D-204ENST00000477748 RPS6KA5O75582 802 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms