RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 GJB5O95377 273 aa7.35□□□□□ -1.23
LINC00173-202ENST00000477702 MYL3P08590 195 aa7.35□□□□□ -1.23
LINC00173-202ENST00000477702 AKR1B1P15121 316 aa7.35□□□□□ -1.23
LINC00173-202ENST00000477702 ZNF16P17020 682 aaPredicted RBP7.35□□□□□ -1.23
LINC00173-202ENST00000477702 LTBRP36941 435 aa7.35□□□□□ -1.23
LINC00173-202ENST00000477702 ZXDAP98168 799 aa7.35□□□□□ -1.23
LINC00173-202ENST00000477702 GABPAQ06546 454 aa7.35□□□□□ -1.23
LINC00173-202ENST00000477702 DLX2Q07687 328 aaPredicted RBP7.35□□□□□ -1.23
LINC00173-202ENST00000477702 GRM2Q14416 872 aa7.35□□□□□ -1.23
LINC00173-202ENST00000477702 TCTN1Q2MV58 587 aa7.35□□□□□ -1.23
LINC00173-202ENST00000477702 TIGD5Q53EQ6 642 aa7.35□□□□□ -1.23
LINC00173-202ENST00000477702 ALG1LQ6GMV1 187 aa7.35□□□□□ -1.23
LINC00173-202ENST00000477702 GDF6Q6KF10 455 aaPredicted RBP7.35□□□□□ -1.23
LINC00173-202ENST00000477702 EEPD1Q7L9B9 569 aa7.35□□□□□ -1.23
LINC00173-202ENST00000477702 MAGEB6Q8N7X4 407 aa7.35□□□□□ -1.23
LINC00173-202ENST00000477702 SEZ6LQ9BYH1 1024 aa7.35□□□□□ -1.23
LINC00173-202ENST00000477702 OSBPL7Q9BZF2 842 aa7.35□□□□□ -1.23
LINC00173-202ENST00000477702 LACRTQ9GZZ8 138 aa7.35□□□□□ -1.23
LINC00173-202ENST00000477702 SH2D4AQ9H788 454 aa7.35□□□□□ -1.23
LINC00173-202ENST00000477702 HOMER2Q9NSB8 354 aa7.35□□□□□ -1.23
LINC00173-202ENST00000477702 MCM9Q9NXL9 1143 aa7.35□□□□□ -1.23
LINC00173-202ENST00000477702 PARP2Q9UGN5 583 aa7.35□□□□□ -1.23
LINC00173-202ENST00000477702 PARP14Q460N5 1801 aa7.35□□□□□ -1.23
LINC00173-202ENST00000477702 CEP250Q9BV73 2442 aa7.35□□□□□ -1.23
LINC00173-202ENST00000477702 KMT2EQ8IZD2 1858 aa7.34□□□□□ -1.23
LINC00173-202ENST00000477702 MYO5AQ9Y4I1 1855 aaKnown RBP7.34□□□□□ -1.23
LINC00173-202ENST00000477702 PROB1E7EW31 1015 aa7.34□□□□□ -1.23
LINC00173-202ENST00000477702 E9PSI1 815 aa7.34□□□□□ -1.23
LINC00173-202ENST00000477702 EEF2P13639 858 aaKnown RBP7.34□□□□□ -1.23
LINC00173-202ENST00000477702 AVPR2P30518 371 aa7.34□□□□□ -1.23
LINC00173-202ENST00000477702 AFF1P51825 1210 aaKnown RBP7.34□□□□□ -1.23
LINC00173-202ENST00000477702 CHMP4BP1P59074 171 aa7.34□□□□□ -1.23
LINC00173-202ENST00000477702 COL9A3Q14050 684 aaPredicted RBP7.34□□□□□ -1.23
LINC00173-202ENST00000477702 SMAD2Q15796 467 aaKnown RBP7.34□□□□□ -1.23
LINC00173-202ENST00000477702 PTPROQ16827 1216 aa7.34□□□□□ -1.23
LINC00173-202ENST00000477702 SPRED3Q2MJR0 410 aa7.34□□□□□ -1.23
LINC00173-202ENST00000477702 KIAA0319Q5VV43 1072 aa7.34□□□□□ -1.23
LINC00173-202ENST00000477702 NXPE4Q6UWF7 544 aa7.34□□□□□ -1.23
LINC00173-202ENST00000477702 RPAINQ86UA6 219 aa7.34□□□□□ -1.23
LINC00173-202ENST00000477702 ADSSL1Q8N142 457 aa7.34□□□□□ -1.23
LINC00173-202ENST00000477702 GLIS3Q8NEA6 775 aa7.34□□□□□ -1.23
LINC00173-202ENST00000477702 SSH1Q8WYL5 1049 aa7.34□□□□□ -1.23
LINC00173-202ENST00000477702 NXPE3Q969Y0 559 aa7.34□□□□□ -1.23
LINC00173-202ENST00000477702 TCF12Q99081 682 aa7.34□□□□□ -1.23
LINC00173-202ENST00000477702 SLF1Q9BQI6 1058 aa7.34□□□□□ -1.23
LINC00173-202ENST00000477702 IRF2BPLQ9H1B7 796 aa7.34□□□□□ -1.23
LINC00173-202ENST00000477702 RBSNQ9H1K0 784 aa7.34□□□□□ -1.23
LINC00173-202ENST00000477702 LIN7BQ9HAP6 207 aa7.34□□□□□ -1.23
LINC00173-202ENST00000477702 RAVER2Q9HCJ3 691 aaKnown RBP7.34□□□□□ -1.23
LINC00173-202ENST00000477702 CFAP47Q6ZTR5 3102 aa7.34□□□□□ -1.23
LINC00173-202ENST00000477702 DMDP11532 3685 aa7.34□□□□□ -1.23
LINC00173-202ENST00000477702 MAP1BP46821 2468 aaKnown RBP7.34□□□□□ -1.24
LINC00173-202ENST00000477702 PDE2AO00408 941 aaPredicted RBP7.33□□□□□ -1.24
LINC00173-202ENST00000477702 MBTPS2O43462 519 aa7.33□□□□□ -1.24
LINC00173-202ENST00000477702 CSPG5O95196 566 aa7.33□□□□□ -1.24
LINC00173-202ENST00000477702 PDGFBP01127 241 aaPredicted RBP7.33□□□□□ -1.24
LINC00173-202ENST00000477702 GRIA4P48058 902 aa7.33□□□□□ -1.24
LINC00173-202ENST00000477702 DGKGP49619 791 aa7.33□□□□□ -1.24
LINC00173-202ENST00000477702 GPM6BQ13491 265 aa7.33□□□□□ -1.24
LINC00173-202ENST00000477702 GPNMBQ14956 572 aa7.33□□□□□ -1.24
LINC00173-202ENST00000477702 EPC2Q52LR7 807 aa7.33□□□□□ -1.24
LINC00173-202ENST00000477702 FRMD5Q7Z6J6 570 aa7.33□□□□□ -1.24
LINC00173-202ENST00000477702 FBXO16Q8IX29 292 aaPredicted RBP7.33□□□□□ -1.24
LINC00173-202ENST00000477702 MEIS3Q99687 375 aa7.33□□□□□ -1.24
LINC00173-202ENST00000477702 DBNDD2Q9BQY9 259 aa7.33□□□□□ -1.24
LINC00173-202ENST00000477702 BCO2Q9BYV7 579 aa7.33□□□□□ -1.24
LINC00173-202ENST00000477702 SUV39H2Q9H5I1 410 aa7.33□□□□□ -1.24
LINC00173-202ENST00000477702 SH2B1Q9NRF2 756 aaPredicted RBP7.33□□□□□ -1.24
LINC00173-202ENST00000477702 FRRS1LQ9P0K9 344 aa7.33□□□□□ -1.24
LINC00173-202ENST00000477702 CTNNA3Q9UI47 895 aa7.33□□□□□ -1.24
LINC00173-202ENST00000477702 CTDP1Q9Y5B0 961 aaPredicted RBP7.33□□□□□ -1.24
LINC00173-202ENST00000477702 FRYLO94915 3013 aa7.33□□□□□ -1.24
LINC00173-202ENST00000477702 SIP14410 1827 aa7.33□□□□□ -1.24
LINC00173-202ENST00000477702 RBM47A0AV96 593 aaKnown RBP7.32□□□□□ -1.24
LINC00173-202ENST00000477702 ZBED4O75132 1171 aa7.32□□□□□ -1.24
LINC00173-202ENST00000477702 CDC25BP30305 580 aa7.32□□□□□ -1.24
LINC00173-202ENST00000477702 GTF2F1P35269 517 aaKnown RBP eCLIP7.32□□□□□ -1.24
LINC00173-202ENST00000477702 PURAQ00577 322 aaKnown RBP7.32□□□□□ -1.24
LINC00173-202ENST00000477702 BFSP2Q13515 415 aa7.32□□□□□ -1.24
LINC00173-202ENST00000477702 CCDC158Q5M9N0 1113 aa7.32□□□□□ -1.24
LINC00173-202ENST00000477702 IQSEC1Q6DN90 963 aa7.32□□□□□ -1.24
LINC00173-202ENST00000477702 TAPT1Q6NXT6 567 aa7.32□□□□□ -1.24
LINC00173-202ENST00000477702 KANK3Q6NY19 840 aa7.32□□□□□ -1.24
LINC00173-202ENST00000477702 DGLUCYQ7Z3D6 616 aa7.32□□□□□ -1.24
LINC00173-202ENST00000477702 CCNJLQ8IV13 435 aa7.32□□□□□ -1.24
LINC00173-202ENST00000477702 TMEM102Q8N9M5 508 aaPredicted RBP7.32□□□□□ -1.24
LINC00173-202ENST00000477702 ASAP3Q8TDY4 903 aa7.32□□□□□ -1.24
LINC00173-202ENST00000477702 FBF1Q8TES7 1133 aa7.32□□□□□ -1.24
LINC00173-202ENST00000477702 RMDN1Q96DB5 314 aa7.32□□□□□ -1.24
LINC00173-202ENST00000477702 MTG1Q9BT17 334 aaPredicted RBP7.32□□□□□ -1.24
LINC00173-202ENST00000477702 NSUN3Q9H649 340 aaKnown RBP7.32□□□□□ -1.24
LINC00173-202ENST00000477702 USP24Q9UPU5 2620 aa7.31□□□□□ -1.24
LINC00173-202ENST00000477702 CYP2D7A0A087X1C5 515 aa7.31□□□□□ -1.24
LINC00173-202ENST00000477702 LINC01565O15544 149 aa7.31□□□□□ -1.24
LINC00173-202ENST00000477702 NBNO60934 754 aa7.31□□□□□ -1.24
LINC00173-202ENST00000477702 LILRB5O75023 590 aa7.31□□□□□ -1.24
LINC00173-202ENST00000477702 TBX10O75333 385 aa7.31□□□□□ -1.24
LINC00173-202ENST00000477702 SMNDC1O75940 238 aaKnown RBP eCLIP7.31□□□□□ -1.24
LINC00173-202ENST00000477702 NBL1P41271 181 aa7.31□□□□□ -1.24
LINC00173-202ENST00000477702 INSM1Q01101 510 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms