RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 SLFN12Q8IYM2 578 aa24.45■■□□□ 1.5
COL9A3-211ENST00000477612 SPTBN5Q9NRC6 3674 aaKnown RBP24.45■■□□□ 1.5
COL9A3-211ENST00000477612 FNDC1Q4ZHG4 1894 aaPredicted RBP24.45■■□□□ 1.5
COL9A3-211ENST00000477612 GPR182O15218 404 aa24.44■■□□□ 1.5
COL9A3-211ENST00000477612 DKC1O60832 514 aaKnown RBP eCLIP24.44■■□□□ 1.5
COL9A3-211ENST00000477612 DGKIO75912 1065 aa24.44■■□□□ 1.5
COL9A3-211ENST00000477612 P4HBP07237 508 aaKnown RBP24.44■■□□□ 1.5
COL9A3-211ENST00000477612 QARSP47897 775 aaKnown RBP24.44■■□□□ 1.5
COL9A3-211ENST00000477612 TBC1D8BQ0IIM8 1120 aa24.44■■□□□ 1.5
COL9A3-211ENST00000477612 RABEP1Q15276 862 aa24.44■■□□□ 1.5
COL9A3-211ENST00000477612 EPHA7Q15375 998 aa24.44■■□□□ 1.5
COL9A3-211ENST00000477612 KIZQ2M2Z5 673 aa24.44■■□□□ 1.5
COL9A3-211ENST00000477612 PPM1EQ8WY54 764 aa24.44■■□□□ 1.5
COL9A3-211ENST00000477612 MAP7D2Q96T17 732 aa24.44■■□□□ 1.5
COL9A3-211ENST00000477612 C17orf80Q9BSJ5 609 aa24.44■■□□□ 1.5
COL9A3-211ENST00000477612 ADAMTS10Q9H324 1103 aa24.44■■□□□ 1.5
COL9A3-211ENST00000477612 GINS2Q9Y248 185 aa24.44■■□□□ 1.5
COL9A3-211ENST00000477612 BAG4O95429 457 aaKnown RBP24.43■■□□□ 1.5
COL9A3-211ENST00000477612 LINC00271P0C7V0 271 aa24.43■■□□□ 1.5
COL9A3-211ENST00000477612 NFX1Q12986 1120 aaKnown RBP24.43■■□□□ 1.5
COL9A3-211ENST00000477612 CCDC85BQ15834 202 aaPredicted RBP24.43■■□□□ 1.5
COL9A3-211ENST00000477612 TMEM266Q2M3C6 531 aa24.43■■□□□ 1.5
COL9A3-211ENST00000477612 ANO5Q75V66 913 aa24.43■■□□□ 1.5
COL9A3-211ENST00000477612 NPAS4Q8IUM7 802 aa24.43■■□□□ 1.5
COL9A3-211ENST00000477612 LRRC71Q8N4P6 559 aa24.43■■□□□ 1.5
COL9A3-211ENST00000477612 BANK1Q8NDB2 785 aa24.43■■□□□ 1.5
COL9A3-211ENST00000477612 OSMRQ99650 979 aa24.43■■□□□ 1.5
COL9A3-211ENST00000477612 SEPT9Q9UHD8 586 aaPredicted RBP24.43■■□□□ 1.5
COL9A3-211ENST00000477612 ST3GAL5Q9UNP4 418 aa24.43■■□□□ 1.5
COL9A3-211ENST00000477612 ARID2Q68CP9 1835 aa24.42■■□□□ 1.5
COL9A3-211ENST00000477612 NLRP11P59045 1033 aaKnown RBP24.42■■□□□ 1.5
COL9A3-211ENST00000477612 EPC2Q52LR7 807 aa24.42■■□□□ 1.5
COL9A3-211ENST00000477612 FAM228AQ86W67 206 aa24.42■■□□□ 1.5
COL9A3-211ENST00000477612 C4orf19Q8IY42 314 aa24.42■■□□□ 1.5
COL9A3-211ENST00000477612 C8orf76Q96K31 380 aa24.42■■□□□ 1.5
COL9A3-211ENST00000477612 PRDM6Q9NQX0 595 aa24.42■■□□□ 1.5
COL9A3-211ENST00000477612 RGS18Q9NS28 235 aa24.42■■□□□ 1.5
COL9A3-211ENST00000477612 MTUS1Q9ULD2 1270 aa24.42■■□□□ 1.5
COL9A3-211ENST00000477612 AKT3Q9Y243 479 aa24.42■■□□□ 1.5
COL9A3-211ENST00000477612 KIAA1671Q9BY89 1806 aa24.42■■□□□ 1.5
COL9A3-211ENST00000477612 ADGRA3Q8IWK6 1321 aa24.41■■□□□ 1.5
COL9A3-211ENST00000477612 MARCH6O60337 910 aa24.41■■□□□ 1.5
COL9A3-211ENST00000477612 MGEA5O60502 916 aa24.41■■□□□ 1.5
COL9A3-211ENST00000477612 MAFO75444 373 aaPredicted RBP24.41■■□□□ 1.5
COL9A3-211ENST00000477612 STAG3L1P0CL83 205 aa24.41■■□□□ 1.5
COL9A3-211ENST00000477612 EIF4BP23588 611 aaKnown RBP24.41■■□□□ 1.5
COL9A3-211ENST00000477612 GPC3P51654 580 aa24.41■■□□□ 1.5
COL9A3-211ENST00000477612 CDC42EP1Q00587 391 aa24.41■■□□□ 1.5
COL9A3-211ENST00000477612 SAFBQ15424 915 aaKnown RBP eCLIP24.41■■□□□ 1.5
COL9A3-211ENST00000477612 MTERF2Q49AM1 385 aa24.41■■□□□ 1.5
COL9A3-211ENST00000477612 TMEM192Q8IY95 271 aa24.41■■□□□ 1.5
COL9A3-211ENST00000477612 FIBCD1Q8N539 461 aa24.41■■□□□ 1.5
COL9A3-211ENST00000477612 FBXO22Q8NEZ5 403 aa24.41■■□□□ 1.5
COL9A3-211ENST00000477612 FBXO18Q8NFZ0 1043 aa24.41■■□□□ 1.5
COL9A3-211ENST00000477612 GDPD5Q8WTR4 605 aa24.41■■□□□ 1.5
COL9A3-211ENST00000477612 ATXN2LQ8WWM7 1075 aaKnown RBP24.41■■□□□ 1.5
COL9A3-211ENST00000477612 CLP1Q92989 425 aaKnown RBP24.41■■□□□ 1.5
COL9A3-211ENST00000477612 MTMR9Q96QG7 549 aa24.41■■□□□ 1.5
COL9A3-211ENST00000477612 PPME1Q9Y570 386 aa24.41■■□□□ 1.5
COL9A3-211ENST00000477612 VCANP13611 3396 aa24.41■■□□□ 1.5
COL9A3-211ENST00000477612 TMEM150BA6NC51 233 aa24.4■■□□□ 1.5
COL9A3-211ENST00000477612 DDX11L8A8MPP1 907 aa24.4■■□□□ 1.5
COL9A3-211ENST00000477612 C5orf67F2Z3F1 127 aa24.4■■□□□ 1.5
COL9A3-211ENST00000477612 H3BNC9 293 aa24.4■■□□□ 1.5
COL9A3-211ENST00000477612 DLL1O00548 723 aa24.4■■□□□ 1.5
COL9A3-211ENST00000477612 WNT7AO00755 349 aa24.4■■□□□ 1.5
COL9A3-211ENST00000477612 SARSP49591 514 aaKnown RBP24.4■■□□□ 1.5
COL9A3-211ENST00000477612 FOSBP53539 338 aa24.4■■□□□ 1.5
COL9A3-211ENST00000477612 FOXP1Q9H334 677 aaPredicted RBP24.4■■□□□ 1.5
COL9A3-211ENST00000477612 C1orf112Q9NSG2 853 aa24.4■■□□□ 1.5
COL9A3-211ENST00000477612 WRAP73Q9P2S5 460 aaPredicted RBP24.4■■□□□ 1.5
COL9A3-211ENST00000477612 THEGQ9P2T0 379 aa24.4■■□□□ 1.5
COL9A3-211ENST00000477612 PCDHA12Q9UN75 941 aa24.4■■□□□ 1.5
COL9A3-211ENST00000477612 C9IYK1 514 aa24.39■■□□□ 1.49
COL9A3-211ENST00000477612 RB1P06400 928 aa24.39■■□□□ 1.49
COL9A3-211ENST00000477612 FAM189BP81408 668 aa24.39■■□□□ 1.49
COL9A3-211ENST00000477612 DRP2Q13474 957 aa24.39■■□□□ 1.49
COL9A3-211ENST00000477612 DSC3Q14574 896 aa24.39■■□□□ 1.49
COL9A3-211ENST00000477612 CALCRLQ16602 461 aa24.39■■□□□ 1.49
COL9A3-211ENST00000477612 SLC24A5Q71RS6 500 aa24.39■■□□□ 1.49
COL9A3-211ENST00000477612 CMTR2Q8IYT2 770 aaKnown RBP24.39■■□□□ 1.49
COL9A3-211ENST00000477612 PPP1R16BQ96T49 567 aa24.39■■□□□ 1.49
COL9A3-211ENST00000477612 JPH2Q9BR39 696 aaPredicted RBP24.39■■□□□ 1.49
COL9A3-211ENST00000477612 CYP26B1Q9NR63 512 aa24.39■■□□□ 1.49
COL9A3-211ENST00000477612 RNF216Q9NWF9 866 aaPredicted RBP24.39■■□□□ 1.49
COL9A3-211ENST00000477612 RWDD3Q9Y3V2 267 aa24.39■■□□□ 1.49
COL9A3-211ENST00000477612 ATG2AQ2TAZ0 1938 aa24.39■■□□□ 1.49
COL9A3-211ENST00000477612 ST18O60284 1047 aa24.38■■□□□ 1.49
COL9A3-211ENST00000477612 NEMFO60524 1076 aa24.38■■□□□ 1.49
COL9A3-211ENST00000477612 SLITRK3O94933 977 aa24.38■■□□□ 1.49
COL9A3-211ENST00000477612 GUCY1B3Q02153 619 aa24.38■■□□□ 1.49
COL9A3-211ENST00000477612 MICALL1Q8N3F8 863 aa24.38■■□□□ 1.49
COL9A3-211ENST00000477612 ADAM2Q99965 735 aa24.38■■□□□ 1.49
COL9A3-211ENST00000477612 SH2D3AQ9BRG2 576 aa24.38■■□□□ 1.49
COL9A3-211ENST00000477612 LXNQ9BS40 222 aa24.38■■□□□ 1.49
COL9A3-211ENST00000477612 COL25A1Q9BXS0 654 aaPredicted RBP24.38■■□□□ 1.49
COL9A3-211ENST00000477612 UPF2Q9HAU5 1272 aaKnown RBP24.38■■□□□ 1.49
COL9A3-211ENST00000477612 DARSP14868 501 aaKnown RBP24.37■■□□□ 1.49
COL9A3-211ENST00000477612 DNM2P50570 870 aa24.37■■□□□ 1.49
COL9A3-211ENST00000477612 ORC2Q13416 577 aaPredicted RBP24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms