RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 MAFO75444 373 aaPredicted RBP17.98■□□□□ 0.47
VHL-203ENST00000477538 C22orf31O95567 290 aa17.98■□□□□ 0.47
VHL-203ENST00000477538 KRT18P05783 430 aaKnown RBP17.98■□□□□ 0.47
VHL-203ENST00000477538 GNAT1P11488 350 aa17.98■□□□□ 0.47
VHL-203ENST00000477538 KLRC1P26715 233 aa17.98■□□□□ 0.47
VHL-203ENST00000477538 HOXC8P31273 242 aa17.98■□□□□ 0.47
VHL-203ENST00000477538 ADAM17P78536 824 aa17.98■□□□□ 0.47
VHL-203ENST00000477538 PTPN11Q06124 597 aaPredicted RBP17.98■□□□□ 0.47
VHL-203ENST00000477538 RAD51AP2Q09MP3 1159 aa17.98■□□□□ 0.47
VHL-203ENST00000477538 HIC1Q14526 733 aa17.98■□□□□ 0.47
VHL-203ENST00000477538 KLHL40Q2TBA0 621 aa17.98■□□□□ 0.47
VHL-203ENST00000477538 SKOR2Q2VWA4 1001 aaPredicted RBP17.98■□□□□ 0.47
VHL-203ENST00000477538 ARSHQ5FYA8 562 aa17.98■□□□□ 0.47
VHL-203ENST00000477538 MTHFD1LQ6UB35 978 aa17.98■□□□□ 0.47
VHL-203ENST00000477538 DYMQ7RTS9 669 aa17.98■□□□□ 0.47
VHL-203ENST00000477538 ELOA2Q8IYF1 753 aaPredicted RBP17.98■□□□□ 0.47
VHL-203ENST00000477538 DDX12PQ92771 950 aa17.98■□□□□ 0.47
VHL-203ENST00000477538 TRIM9Q9C026 710 aa17.98■□□□□ 0.47
VHL-203ENST00000477538 SENP6Q9GZR1 1112 aaPredicted RBP17.98■□□□□ 0.47
VHL-203ENST00000477538 NUP62CLQ9H1M0 184 aa17.98■□□□□ 0.47
VHL-203ENST00000477538 CLSTN2Q9H4D0 955 aa17.98■□□□□ 0.47
VHL-203ENST00000477538 HOOK1Q9UJC3 728 aaKnown RBP17.98■□□□□ 0.47
VHL-203ENST00000477538 TUBE1Q9UJT0 475 aa17.98■□□□□ 0.47
VHL-203ENST00000477538 NPHP3-ACAD11A0A0J9YXS1 232 aa17.97■□□□□ 0.47
VHL-203ENST00000477538 MBLAC1A4D2B0 266 aaPredicted RBP17.97■□□□□ 0.47
VHL-203ENST00000477538 GTPBP6O43824 516 aaPredicted RBP17.97■□□□□ 0.47
VHL-203ENST00000477538 PRR29P0C7W0 189 aa17.97■□□□□ 0.47
VHL-203ENST00000477538 COL6A1P12109 1028 aa17.97■□□□□ 0.47
VHL-203ENST00000477538 GUCY2CP25092 1073 aa17.97■□□□□ 0.47
VHL-203ENST00000477538 CASP1P29466 404 aa17.97■□□□□ 0.47
VHL-203ENST00000477538 ZNF200P98182 395 aaPredicted RBP17.97■□□□□ 0.47
VHL-203ENST00000477538 POSTNQ15063 836 aa17.97■□□□□ 0.47
VHL-203ENST00000477538 MARCH8Q5T0T0 291 aa17.97■□□□□ 0.47
VHL-203ENST00000477538 GDF6Q6KF10 455 aaPredicted RBP17.97■□□□□ 0.47
VHL-203ENST00000477538 SLC43A3Q8NBI5 491 aa17.97■□□□□ 0.47
VHL-203ENST00000477538 RETREG2Q8NC44 543 aa17.97■□□□□ 0.47
VHL-203ENST00000477538 MCPH1Q8NEM0 835 aa17.97■□□□□ 0.47
VHL-203ENST00000477538 ZBTB10Q96DT7 871 aa17.97■□□□□ 0.47
VHL-203ENST00000477538 ABHD8Q96I13 439 aa17.97■□□□□ 0.47
VHL-203ENST00000477538 C7orf25Q9BPX7 421 aa17.97■□□□□ 0.47
VHL-203ENST00000477538 JPH2Q9BR39 696 aaPredicted RBP17.97■□□□□ 0.47
VHL-203ENST00000477538 REEP2Q9BRK0 252 aa17.97■□□□□ 0.47
VHL-203ENST00000477538 TIPINQ9BVW5 301 aa17.97■□□□□ 0.47
VHL-203ENST00000477538 SEZ6LQ9BYH1 1024 aa17.97■□□□□ 0.47
VHL-203ENST00000477538 BLZF1Q9H2G9 400 aa17.97■□□□□ 0.47
VHL-203ENST00000477538 C11orf49Q9H6J7 331 aa17.97■□□□□ 0.47
VHL-203ENST00000477538 XPNPEP1Q9NQW7 623 aa17.97■□□□□ 0.47
VHL-203ENST00000477538 PDLIM7Q9NR12 457 aa17.97■□□□□ 0.47
VHL-203ENST00000477538 BRCA2P51587 3418 aa17.96■□□□□ 0.47
VHL-203ENST00000477538 IGKV6-21A0A0C4DH24 114 aa17.96■□□□□ 0.47
VHL-203ENST00000477538 ARVCFO00192 962 aa17.96■□□□□ 0.47
VHL-203ENST00000477538 TREHO43280 583 aa17.96■□□□□ 0.47
VHL-203ENST00000477538 GAS2O43903 313 aaKnown RBP17.96■□□□□ 0.47
VHL-203ENST00000477538 TRAK2O60296 914 aa17.96■□□□□ 0.47
VHL-203ENST00000477538 HIP1RO75146 1068 aa17.96■□□□□ 0.47
VHL-203ENST00000477538 MYL1P05976 194 aa17.96■□□□□ 0.47
VHL-203ENST00000477538 EN2P19622 333 aaPredicted RBP17.96■□□□□ 0.47
VHL-203ENST00000477538 ASIC1P78348 528 aa17.96■□□□□ 0.47
VHL-203ENST00000477538 MDM2Q00987 491 aaPredicted RBP17.96■□□□□ 0.47
VHL-203ENST00000477538 CACNB1Q02641 598 aaPredicted RBP17.96■□□□□ 0.47
VHL-203ENST00000477538 PNOCQ13519 176 aa17.96■□□□□ 0.47
VHL-203ENST00000477538 CUL4BQ13620 913 aa17.96■□□□□ 0.47
VHL-203ENST00000477538 GIT2Q14161 759 aa17.96■□□□□ 0.47
VHL-203ENST00000477538 CAMK4Q16566 473 aa17.96■□□□□ 0.47
VHL-203ENST00000477538 EFCAB12Q6NXP0 572 aa17.96■□□□□ 0.47
VHL-203ENST00000477538 CNNM4Q6P4Q7 775 aa17.96■□□□□ 0.47
VHL-203ENST00000477538 MAEAQ7L5Y9 396 aa17.96■□□□□ 0.47
VHL-203ENST00000477538 METTL13Q8N6R0 699 aa17.96■□□□□ 0.47
VHL-203ENST00000477538 DNAJC19Q96DA6 116 aa17.96■□□□□ 0.47
VHL-203ENST00000477538 PAWRQ96IZ0 340 aaKnown RBP17.96■□□□□ 0.47
VHL-203ENST00000477538 SUGCTQ9HAC7 445 aa17.96■□□□□ 0.47
VHL-203ENST00000477538 TANC1Q9C0D5 1861 aa17.96■□□□□ 0.47
VHL-203ENST00000477538 TBCAO75347 108 aaKnown RBP17.95■□□□□ 0.46
VHL-203ENST00000477538 CYP2C9P11712 490 aa17.95■□□□□ 0.46
VHL-203ENST00000477538 CLCN3P51790 818 aa17.95■□□□□ 0.46
VHL-203ENST00000477538 SOX10P56693 466 aa17.95■□□□□ 0.46
VHL-203ENST00000477538 DPYDQ12882 1025 aa17.95■□□□□ 0.46
VHL-203ENST00000477538 CCDC183Q5T5S1 534 aa17.95■□□□□ 0.46
VHL-203ENST00000477538 FAM102BQ5T8I3 360 aa17.95■□□□□ 0.46
VHL-203ENST00000477538 CAVIN1Q6NZI2 390 aaKnown RBP17.95■□□□□ 0.46
VHL-203ENST00000477538 SLC39A5Q6ZMH5 540 aa17.95■□□□□ 0.46
VHL-203ENST00000477538 NECAB2Q7Z6G3 386 aa17.95■□□□□ 0.46
VHL-203ENST00000477538 LRRC71Q8N4P6 559 aa17.95■□□□□ 0.46
VHL-203ENST00000477538 SYAP1Q96A49 352 aaPredicted RBP17.95■□□□□ 0.46
VHL-203ENST00000477538 ODF2LQ9ULJ1 636 aa17.95■□□□□ 0.46
VHL-203ENST00000477538 PCDHA2Q9Y5H9 948 aa17.95■□□□□ 0.46
VHL-203ENST00000477538 RSPH10B2B2RC85 870 aa17.94■□□□□ 0.46
VHL-203ENST00000477538 FAM13AO94988 1023 aa17.94■□□□□ 0.46
VHL-203ENST00000477538 RSPH10BP0C881 870 aa17.94■□□□□ 0.46
VHL-203ENST00000477538 IDEP14735 1019 aa17.94■□□□□ 0.46
VHL-203ENST00000477538 TMOD1P28289 359 aa17.94■□□□□ 0.46
VHL-203ENST00000477538 DNM2P50570 870 aa17.94■□□□□ 0.46
VHL-203ENST00000477538 CDK7P50613 346 aa17.94■□□□□ 0.46
VHL-203ENST00000477538 ATN1P54259 1190 aaPredicted RBP17.94■□□□□ 0.46
VHL-203ENST00000477538 MAPK7Q13164 816 aa17.94■□□□□ 0.46
VHL-203ENST00000477538 PTGISQ16647 500 aa17.94■□□□□ 0.46
VHL-203ENST00000477538 IER5Q5VY09 327 aa17.94■□□□□ 0.46
VHL-203ENST00000477538 RUFY4Q6ZNE9 571 aa17.94■□□□□ 0.46
VHL-203ENST00000477538 LINC01465Q8N7H1 131 aa17.94■□□□□ 0.46
VHL-203ENST00000477538 TCP11Q8WWU5 503 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms