RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 ITGB3BPQ13352 177 aaPredicted RBP7.6□□□□□ -1.19
RTFDC1-206ENST00000477485 MTMR3Q13615 1198 aa7.6□□□□□ -1.19
RTFDC1-206ENST00000477485 PDE12Q6L8Q7 609 aaKnown RBP7.6□□□□□ -1.19
RTFDC1-206ENST00000477485 MIS18BP1Q6P0N0 1132 aa7.6□□□□□ -1.19
RTFDC1-206ENST00000477485 SLC24A5Q71RS6 500 aa7.6□□□□□ -1.19
RTFDC1-206ENST00000477485 PLPPR4Q7Z2D5 763 aa7.6□□□□□ -1.19
RTFDC1-206ENST00000477485 TMTC2Q8N394 836 aa7.6□□□□□ -1.19
RTFDC1-206ENST00000477485 KREMEN2Q8NCW0 462 aa7.6□□□□□ -1.19
RTFDC1-206ENST00000477485 TMEM40Q8WWA1 233 aa7.6□□□□□ -1.19
RTFDC1-206ENST00000477485 MRPS27Q92552 414 aaKnown RBP7.6□□□□□ -1.19
RTFDC1-206ENST00000477485 ASIC4Q96FT7 647 aa7.6□□□□□ -1.19
RTFDC1-206ENST00000477485 TMEM87BQ96K49 555 aa7.6□□□□□ -1.19
RTFDC1-206ENST00000477485 ZNF668Q96K58 619 aaPredicted RBP7.6□□□□□ -1.19
RTFDC1-206ENST00000477485 RIPOR3Q96MK2 946 aa7.6□□□□□ -1.19
RTFDC1-206ENST00000477485 ZNF558Q96NG5 402 aa7.6□□□□□ -1.19
RTFDC1-206ENST00000477485 ANO3Q9BYT9 981 aa7.6□□□□□ -1.19
RTFDC1-206ENST00000477485 AGO4Q9HCK5 861 aaKnown RBP7.6□□□□□ -1.19
RTFDC1-206ENST00000477485 TMEM161AQ9NX61 479 aa7.6□□□□□ -1.19
RTFDC1-206ENST00000477485 AKT3Q9Y243 479 aa7.6□□□□□ -1.19
RTFDC1-206ENST00000477485 SAMM50Q9Y512 469 aa7.6□□□□□ -1.19
RTFDC1-206ENST00000477485 COL1A2P08123 1366 aa7.59□□□□□ -1.19
RTFDC1-206ENST00000477485 ZFHX2Q9C0A1 2572 aaPredicted RBP7.59□□□□□ -1.19
RTFDC1-206ENST00000477485 C9IYK1 514 aa7.59□□□□□ -1.19
RTFDC1-206ENST00000477485 SGSM2O43147 1006 aa7.59□□□□□ -1.19
RTFDC1-206ENST00000477485 HOXA2O43364 376 aa7.59□□□□□ -1.19
RTFDC1-206ENST00000477485 PPM1AP35813 382 aa7.59□□□□□ -1.19
RTFDC1-206ENST00000477485 SLC26A2P50443 739 aa7.59□□□□□ -1.19
RTFDC1-206ENST00000477485 METAP2P50579 478 aaKnown RBP eCLIP7.59□□□□□ -1.193e-6■■□□□ 14.5
RTFDC1-206ENST00000477485 CRYBB1P53674 252 aaPredicted RBP7.59□□□□□ -1.19
RTFDC1-206ENST00000477485 SMC1AQ14683 1233 aaKnown RBP7.59□□□□□ -1.19
RTFDC1-206ENST00000477485 TPRNQ4KMQ1 711 aa7.59□□□□□ -1.19
RTFDC1-206ENST00000477485 CEP55Q53EZ4 464 aa7.59□□□□□ -1.19
RTFDC1-206ENST00000477485 ZNF484Q5JVG2 852 aa7.59□□□□□ -1.19
RTFDC1-206ENST00000477485 RARS2Q5T160 578 aaKnown RBP7.59□□□□□ -1.19
RTFDC1-206ENST00000477485 JAKMIP3Q5VZ66 844 aa7.59□□□□□ -1.19
RTFDC1-206ENST00000477485 WWC2Q6AWC2 1192 aa7.59□□□□□ -1.19
RTFDC1-206ENST00000477485 SWSAP1Q6NVH7 229 aa7.59□□□□□ -1.19
RTFDC1-206ENST00000477485 KCNT2Q6UVM3 1135 aa7.59□□□□□ -1.19
RTFDC1-206ENST00000477485 TMTC3Q6ZXV5 915 aa7.59□□□□□ -1.19
RTFDC1-206ENST00000477485 FAM228AQ86W67 206 aa7.59□□□□□ -1.19
RTFDC1-206ENST00000477485 PLA2G4DQ86XP0 818 aa7.59□□□□□ -1.19
RTFDC1-206ENST00000477485 CCDC60Q8IWA6 550 aaPredicted RBP7.59□□□□□ -1.19
RTFDC1-206ENST00000477485 CRIPAKQ8N1N5 446 aa7.59□□□□□ -1.19
RTFDC1-206ENST00000477485 LRRC43Q8N309 656 aa7.59□□□□□ -1.19
RTFDC1-206ENST00000477485 FANCBQ8NB91 859 aa7.59□□□□□ -1.19
RTFDC1-206ENST00000477485 FLCNQ8NFG4 579 aa7.59□□□□□ -1.19
RTFDC1-206ENST00000477485 ATP8B4Q8TF62 1192 aa7.59□□□□□ -1.19
RTFDC1-206ENST00000477485 SUSD6Q92537 303 aa7.59□□□□□ -1.19
RTFDC1-206ENST00000477485 CASP10Q92851 521 aa7.59□□□□□ -1.19
RTFDC1-206ENST00000477485 MAP7D2Q96T17 732 aa7.59□□□□□ -1.19
RTFDC1-206ENST00000477485 SMOC2Q9H3U7 446 aa7.59□□□□□ -1.19
RTFDC1-206ENST00000477485 POMKQ9H5K3 350 aa7.59□□□□□ -1.19
RTFDC1-206ENST00000477485 CWH43Q9H720 699 aa7.59□□□□□ -1.19
RTFDC1-206ENST00000477485 SORCS3Q9UPU3 1222 aa7.59□□□□□ -1.19
RTFDC1-206ENST00000477485 TDRD15B5MCY1 1934 aaKnown RBP7.58□□□□□ -1.2
RTFDC1-206ENST00000477485 CNTNAP5Q8WYK1 1306 aa7.58□□□□□ -1.2
RTFDC1-206ENST00000477485 USP34Q70CQ2 3546 aa7.58□□□□□ -1.2
RTFDC1-206ENST00000477485 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.58□□□□□ -1.2
RTFDC1-206ENST00000477485 SMCO2A6NFE2 343 aa7.58□□□□□ -1.2
RTFDC1-206ENST00000477485 C2CD4DB7Z1M9 353 aa7.58□□□□□ -1.2
RTFDC1-206ENST00000477485 NT5C1B-RDH14C9J2C7 533 aa7.58□□□□□ -1.2
RTFDC1-206ENST00000477485 FSCN2O14926 492 aa7.58□□□□□ -1.2
RTFDC1-206ENST00000477485 GALR2O43603 387 aaPredicted RBP7.58□□□□□ -1.2
RTFDC1-206ENST00000477485 BRD1O95696 1058 aa7.58□□□□□ -1.2
RTFDC1-206ENST00000477485 CCNE2O96020 404 aa7.58□□□□□ -1.2
RTFDC1-206ENST00000477485 FOSP01100 380 aaPredicted RBP7.58□□□□□ -1.2
RTFDC1-206ENST00000477485 ASGR2P07307 311 aa7.58□□□□□ -1.2
RTFDC1-206ENST00000477485 HOXB8P17481 243 aaPredicted RBP7.58□□□□□ -1.2
RTFDC1-206ENST00000477485 CLCN3P51790 818 aa7.58□□□□□ -1.2
RTFDC1-206ENST00000477485 NLRP11P59045 1033 aaKnown RBP7.58□□□□□ -1.2
RTFDC1-206ENST00000477485 BMS1Q14692 1282 aaKnown RBP7.58□□□□□ -1.2
RTFDC1-206ENST00000477485 LONRF3Q496Y0 759 aa7.58□□□□□ -1.2
RTFDC1-206ENST00000477485 SYCE2Q6PIF2 218 aa7.58□□□□□ -1.2
RTFDC1-206ENST00000477485 KIAA0319LQ8IZA0 1049 aa7.58□□□□□ -1.2
RTFDC1-206ENST00000477485 TDRD5Q8NAT2 981 aaKnown RBP7.58□□□□□ -1.2
RTFDC1-206ENST00000477485 HELQQ8TDG4 1101 aa7.58□□□□□ -1.2
RTFDC1-206ENST00000477485 MAP4K1Q92918 833 aa7.58□□□□□ -1.2
RTFDC1-206ENST00000477485 ZNF577Q9BSK1 485 aa7.58□□□□□ -1.2
RTFDC1-206ENST00000477485 TMEM117Q9H0C3 514 aa7.58□□□□□ -1.2
RTFDC1-206ENST00000477485 S1PR5Q9H228 398 aa7.58□□□□□ -1.2
RTFDC1-206ENST00000477485 NGRNQ9NPE2 291 aaKnown RBP7.58□□□□□ -1.2
RTFDC1-206ENST00000477485 RIC8AQ9NPQ8 531 aa7.58□□□□□ -1.2
RTFDC1-206ENST00000477485 SPG21Q9NZD8 308 aa7.58□□□□□ -1.2
RTFDC1-206ENST00000477485 GABBR1Q9UBS5 961 aa7.58□□□□□ -1.2
RTFDC1-206ENST00000477485 DBR1Q9UK59 544 aaKnown RBP7.58□□□□□ -1.2
RTFDC1-206ENST00000477485 LZTS1Q9Y250 596 aa7.58□□□□□ -1.2
RTFDC1-206ENST00000477485 SPTBN4Q9H254 2564 aa7.57□□□□□ -1.2
RTFDC1-206ENST00000477485 IPO5O00410 1097 aaKnown RBP7.57□□□□□ -1.2
RTFDC1-206ENST00000477485 STK25O00506 426 aa7.57□□□□□ -1.2
RTFDC1-206ENST00000477485 SLC27A2O14975 620 aa7.57□□□□□ -1.2
RTFDC1-206ENST00000477485 ZC3H11AO75152 810 aaKnown RBP eCLIP7.57□□□□□ -1.2
RTFDC1-206ENST00000477485 C22orf31O95567 290 aa7.57□□□□□ -1.2
RTFDC1-206ENST00000477485 CXCL14O95715 111 aa7.57□□□□□ -1.2
RTFDC1-206ENST00000477485 PSAPP07602 524 aa7.57□□□□□ -1.2
RTFDC1-206ENST00000477485 FGFR4P22455 802 aa7.57□□□□□ -1.2
RTFDC1-206ENST00000477485 RFX1P22670 979 aa7.57□□□□□ -1.2
RTFDC1-206ENST00000477485 TMOD1P28289 359 aa7.57□□□□□ -1.2
RTFDC1-206ENST00000477485 MTHFRP42898 656 aa7.57□□□□□ -1.2
RTFDC1-206ENST00000477485 FGD1P98174 961 aa7.57□□□□□ -1.2
RTFDC1-206ENST00000477485 PLCB3Q01970 1234 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms