RNA–Protein interactions for RNA: ENST00000477200.1

PIKFYVE-209, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 3

Gene PIKFYVE, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-209ENST00000477200 CHMP4BQ9H444 224 aaKnown RBP5.65□□□□□ -1.5
PIKFYVE-209ENST00000477200 ST7Q9NRC1 585 aa5.65□□□□□ -1.5
PIKFYVE-209ENST00000477200 FAM184BQ9ULE4 1060 aa5.65□□□□□ -1.5
PIKFYVE-209ENST00000477200 TRAF6Q9Y4K3 522 aa5.65□□□□□ -1.5
PIKFYVE-209ENST00000477200 SHROOM4Q9ULL8 1493 aa5.64□□□□□ -1.51
PIKFYVE-209ENST00000477200 STAT5BP51692 787 aa5.64□□□□□ -1.51
PIKFYVE-209ENST00000477200 TERF1P54274 439 aa5.64□□□□□ -1.51
PIKFYVE-209ENST00000477200 RIN1Q13671 783 aa5.64□□□□□ -1.51
PIKFYVE-209ENST00000477200 LRCH2Q5VUJ6 765 aa5.64□□□□□ -1.51
PIKFYVE-209ENST00000477200 YOD1Q5VVQ6 348 aaPredicted RBP5.64□□□□□ -1.51
PIKFYVE-209ENST00000477200 ZNF408Q9H9D4 720 aa5.64□□□□□ -1.51
PIKFYVE-209ENST00000477200 UCKL1Q9NWZ5 548 aa5.64□□□□□ -1.51
PIKFYVE-209ENST00000477200 PTMSP20962 102 aa5.63□□□□□ -1.51
PIKFYVE-209ENST00000477200 STAT3P40763 770 aa5.63□□□□□ -1.51
PIKFYVE-209ENST00000477200 TNNT2P45379 298 aaPredicted RBP5.63□□□□□ -1.51
PIKFYVE-209ENST00000477200 IFRD2Q12894 506 aaPredicted RBP5.63□□□□□ -1.51
PIKFYVE-209ENST00000477200 PAK1Q13153 545 aa5.63□□□□□ -1.51
PIKFYVE-209ENST00000477200 NRDE2Q9H7Z3 1164 aa5.63□□□□□ -1.51
PIKFYVE-209ENST00000477200 CBLCQ9ULV8 474 aa5.63□□□□□ -1.51
PIKFYVE-209ENST00000477200 PRAMEF25A6NGN4 478 aa5.62□□□□□ -1.51
PIKFYVE-209ENST00000477200 KCNK3O14649 394 aa5.62□□□□□ -1.51
PIKFYVE-209ENST00000477200 WNT9AO14904 365 aa5.62□□□□□ -1.51
PIKFYVE-209ENST00000477200 PYGMP11217 842 aa5.62□□□□□ -1.51
PIKFYVE-209ENST00000477200 KRT15P19012 456 aa5.62□□□□□ -1.51
PIKFYVE-209ENST00000477200 JAM2P57087 298 aa5.62□□□□□ -1.51
PIKFYVE-209ENST00000477200 HERVK_113P62684 666 aa5.62□□□□□ -1.51
PIKFYVE-209ENST00000477200 TOB2Q14106 344 aaPredicted RBP5.62□□□□□ -1.51
PIKFYVE-209ENST00000477200 ACAP1Q15027 740 aa5.62□□□□□ -1.51
PIKFYVE-209ENST00000477200 SEC23AQ15436 765 aa5.62□□□□□ -1.51
PIKFYVE-209ENST00000477200 FIGNQ5HY92 759 aa5.62□□□□□ -1.51
PIKFYVE-209ENST00000477200 GRAMD4Q6IC98 578 aa5.62□□□□□ -1.51
PIKFYVE-209ENST00000477200 MRGPREQ86SM8 312 aa5.62□□□□□ -1.51
PIKFYVE-209ENST00000477200 VPS37DQ86XT2 251 aa5.62□□□□□ -1.51
PIKFYVE-209ENST00000477200 ANKRD35Q8N283 1001 aa5.62□□□□□ -1.51
PIKFYVE-209ENST00000477200 MRRFQ96E11 262 aaKnown RBP5.62□□□□□ -1.51
PIKFYVE-209ENST00000477200 OR10A5Q9H207 317 aa5.62□□□□□ -1.51
PIKFYVE-209ENST00000477200 CATSPERZQ9NTU4 200 aa5.62□□□□□ -1.51
PIKFYVE-209ENST00000477200 GOLGA6L3A6NEY3 463 aa5.61□□□□□ -1.51
PIKFYVE-209ENST00000477200 CLGNO14967 610 aa5.61□□□□□ -1.51
PIKFYVE-209ENST00000477200 KIF20AO95235 890 aa5.61□□□□□ -1.51
PIKFYVE-209ENST00000477200 GCP02774 474 aa5.61□□□□□ -1.51
PIKFYVE-209ENST00000477200 PTMAP06454 111 aaKnown RBP5.61□□□□□ -1.51
PIKFYVE-209ENST00000477200 RGS3P49796 1198 aa5.61□□□□□ -1.51
PIKFYVE-209ENST00000477200 MBNL2Q5VZF2 373 aaKnown RBP5.61□□□□□ -1.51
PIKFYVE-209ENST00000477200 BCL6BQ8N143 479 aaPredicted RBP5.61□□□□□ -1.51
PIKFYVE-209ENST00000477200 PCDH19Q8TAB3 1148 aa5.61□□□□□ -1.51
PIKFYVE-209ENST00000477200 HNRNPLLQ8WVV9 542 aaKnown RBP5.61□□□□□ -1.51
PIKFYVE-209ENST00000477200 RABGGTAQ92696 567 aa5.61□□□□□ -1.51
PIKFYVE-209ENST00000477200 FBXW5Q969U6 566 aa5.61□□□□□ -1.51
PIKFYVE-209ENST00000477200 TRAV20A0A0B4J274 112 aa5.6□□□□□ -1.51
PIKFYVE-209ENST00000477200 A0A1W2PRX2 142 aa5.6□□□□□ -1.51
PIKFYVE-209ENST00000477200 IQCA1LA6NCM1 817 aa5.6□□□□□ -1.51
PIKFYVE-209ENST00000477200 CLASP2O75122 1294 aaKnown RBP5.6□□□□□ -1.51
PIKFYVE-209ENST00000477200 ATXN1P54253 815 aaKnown RBP5.6□□□□□ -1.51
PIKFYVE-209ENST00000477200 ADAM15Q13444 863 aa5.6□□□□□ -1.51
PIKFYVE-209ENST00000477200 CSRP2Q16527 193 aa5.6□□□□□ -1.51
PIKFYVE-209ENST00000477200 DDR2Q16832 855 aa5.6□□□□□ -1.51
PIKFYVE-209ENST00000477200 C16orf59Q7L2K0 433 aa5.6□□□□□ -1.51
PIKFYVE-209ENST00000477200 WDR48Q8TAF3 677 aa5.6□□□□□ -1.51
PIKFYVE-209ENST00000477200 NTN5Q8WTR8 489 aaPredicted RBP5.6□□□□□ -1.51
PIKFYVE-209ENST00000477200 FRAT1Q92837 279 aaPredicted RBP5.6□□□□□ -1.51
PIKFYVE-209ENST00000477200 MIEF2Q96C03 454 aa5.6□□□□□ -1.51
PIKFYVE-209ENST00000477200 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.6□□□□□ -1.51
PIKFYVE-209ENST00000477200 KIAA1522Q9P206 1035 aaPredicted RBP5.6□□□□□ -1.51
PIKFYVE-209ENST00000477200 PCDHA8Q9Y5H6 950 aa5.6□□□□□ -1.51
PIKFYVE-209ENST00000477200 NCAPD3P42695 1498 aa5.59□□□□□ -1.51
PIKFYVE-209ENST00000477200 XDHP47989 1333 aa5.59□□□□□ -1.51
PIKFYVE-209ENST00000477200 ZNF561-AS1K7EIQ3 104 aa5.59□□□□□ -1.51
PIKFYVE-209ENST00000477200 NUDT3O95989 172 aa5.59□□□□□ -1.51
PIKFYVE-209ENST00000477200 LMNAP02545 664 aaKnown RBP5.59□□□□□ -1.51
PIKFYVE-209ENST00000477200 MMEP08473 750 aa5.59□□□□□ -1.51
PIKFYVE-209ENST00000477200 MMP14P50281 582 aa5.59□□□□□ -1.51
PIKFYVE-209ENST00000477200 ADCY7P51828 1080 aa5.59□□□□□ -1.51
PIKFYVE-209ENST00000477200 MFAP1P55081 439 aaKnown RBP5.59□□□□□ -1.51
PIKFYVE-209ENST00000477200 ZC3H6P61129 1189 aaKnown RBP5.59□□□□□ -1.51
PIKFYVE-209ENST00000477200 ATP2C1P98194 919 aaPredicted RBP5.59□□□□□ -1.51
PIKFYVE-209ENST00000477200 SLC20A2Q08357 652 aa5.59□□□□□ -1.51
PIKFYVE-209ENST00000477200 EP400NLQ6ZTU2 488 aa5.59□□□□□ -1.51
PIKFYVE-209ENST00000477200 DPH6Q7L8W6 267 aa5.59□□□□□ -1.51
PIKFYVE-209ENST00000477200 VRK3Q8IV63 474 aa5.59□□□□□ -1.51
PIKFYVE-209ENST00000477200 HAS1Q92839 578 aa5.59□□□□□ -1.51
PIKFYVE-209ENST00000477200 SECISBP2LQ93073 1101 aaKnown RBP5.59□□□□□ -1.51
PIKFYVE-209ENST00000477200 ZNF622Q969S3 477 aaKnown RBP eCLIP5.59□□□□□ -1.512e-11■□□□□ 10.9
PIKFYVE-209ENST00000477200 SMURF1Q9HCE7 757 aa5.59□□□□□ -1.51
PIKFYVE-209ENST00000477200 RRAGDQ9NQL2 400 aaPredicted RBP5.59□□□□□ -1.51
PIKFYVE-209ENST00000477200 LAS1LQ9Y4W2 734 aaKnown RBP5.59□□□□□ -1.51
PIKFYVE-209ENST00000477200 CTDP1Q9Y5B0 961 aaPredicted RBP5.59□□□□□ -1.51
PIKFYVE-209ENST00000477200 FAM20BO75063 409 aa5.58□□□□□ -1.52
PIKFYVE-209ENST00000477200 FGRP09769 529 aa5.58□□□□□ -1.52
PIKFYVE-209ENST00000477200 PTGS2P35354 604 aa5.58□□□□□ -1.52
PIKFYVE-209ENST00000477200 MAN2A2P49641 1150 aa5.58□□□□□ -1.52
PIKFYVE-209ENST00000477200 ST5P78524 1137 aa5.58□□□□□ -1.52
PIKFYVE-209ENST00000477200 MRPS21P82921 87 aaKnown RBP5.58□□□□□ -1.52
PIKFYVE-209ENST00000477200 MTDHQ86UE4 582 aaKnown RBP5.58□□□□□ -1.52
PIKFYVE-209ENST00000477200 TRIM44Q96DX7 344 aaPredicted RBP5.58□□□□□ -1.52
PIKFYVE-209ENST00000477200 ZNF764Q96H86 408 aaPredicted RBP5.58□□□□□ -1.52
PIKFYVE-209ENST00000477200 GTPBP4Q9BZE4 634 aaKnown RBP5.58□□□□□ -1.52
PIKFYVE-209ENST00000477200 TRAF5O00463 557 aa5.57□□□□□ -1.52
PIKFYVE-209ENST00000477200 SRGAP2CP0DJJ0 459 aa5.57□□□□□ -1.52
PIKFYVE-209ENST00000477200 IRX3P78415 501 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms