RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 HAS3O00219 553 aa8.35□□□□□ -1.07
BRCA1-214ENST00000477152 FAM13AO94988 1023 aa8.35□□□□□ -1.07
BRCA1-214ENST00000477152 GJB5O95377 273 aa8.35□□□□□ -1.07
BRCA1-214ENST00000477152 RSPH10BP0C881 870 aa8.35□□□□□ -1.07
BRCA1-214ENST00000477152 RHOQP17081 205 aa8.35□□□□□ -1.07
BRCA1-214ENST00000477152 GRM4Q14833 912 aa8.35□□□□□ -1.07
BRCA1-214ENST00000477152 PGM5Q15124 567 aa8.35□□□□□ -1.07
BRCA1-214ENST00000477152 MRPL14Q6P1L8 145 aaKnown RBP8.35□□□□□ -1.07
BRCA1-214ENST00000477152 FAM43BQ6ZT52 329 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-214ENST00000477152 HOMER1Q86YM7 354 aa8.35□□□□□ -1.07
BRCA1-214ENST00000477152 CTCFLQ8NI51 663 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-214ENST00000477152 SMARCC2Q8TAQ2 1214 aa8.35□□□□□ -1.07
BRCA1-214ENST00000477152 RNF217Q8TC41 542 aa8.35□□□□□ -1.07
BRCA1-214ENST00000477152 TBC1D5Q92609 795 aa8.35□□□□□ -1.07
BRCA1-214ENST00000477152 KAT2BQ92831 832 aa8.35□□□□□ -1.07
BRCA1-214ENST00000477152 ATP6V0A1Q93050 837 aa8.35□□□□□ -1.07
BRCA1-214ENST00000477152 MAP3K14Q99558 947 aa8.35□□□□□ -1.07
BRCA1-214ENST00000477152 MTA3Q9BTC8 594 aa8.35□□□□□ -1.07
BRCA1-214ENST00000477152 CPVLQ9H3G5 476 aa8.35□□□□□ -1.07
BRCA1-214ENST00000477152 CERS4Q9HA82 394 aa8.35□□□□□ -1.07
BRCA1-214ENST00000477152 DCTN4Q9UJW0 460 aa8.35□□□□□ -1.07
BRCA1-214ENST00000477152 SIP14410 1827 aa8.35□□□□□ -1.07
BRCA1-214ENST00000477152 FIBPO43427 364 aa8.35□□□□□ -1.07
BRCA1-214ENST00000477152 FZD6O60353 706 aa8.35□□□□□ -1.07
BRCA1-214ENST00000477152 HOXD8P13378 290 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-214ENST00000477152 SMARCA1P28370 1054 aa8.35□□□□□ -1.07
BRCA1-214ENST00000477152 THPOP40225 353 aa8.35□□□□□ -1.07
BRCA1-214ENST00000477152 ERVK-21P61565 698 aa8.35□□□□□ -1.07
BRCA1-214ENST00000477152 GRB10Q13322 594 aa8.35□□□□□ -1.07
BRCA1-214ENST00000477152 CASC1Q6TDU7 716 aa8.35□□□□□ -1.07
BRCA1-214ENST00000477152 NPAS4Q8IUM7 802 aa8.35□□□□□ -1.07
BRCA1-214ENST00000477152 MTMR8Q96EF0 704 aa8.35□□□□□ -1.07
BRCA1-214ENST00000477152 RRP36Q96EU6 259 aaKnown RBP8.35□□□□□ -1.07
BRCA1-214ENST00000477152 RIOX1Q9H6W3 641 aa8.35□□□□□ -1.07
BRCA1-214ENST00000477152 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.35□□□□□ -1.077e-6■■■■■ 74.5
BRCA1-214ENST00000477152 COL20A1Q9P218 1284 aa8.35□□□□□ -1.07
BRCA1-214ENST00000477152 MAD2L2Q9UI95 211 aa8.35□□□□□ -1.07
BRCA1-214ENST00000477152 RWDD3Q9Y3V2 267 aa8.35□□□□□ -1.07
BRCA1-214ENST00000477152 TCF20Q9UGU0 1960 aaKnown RBP8.34□□□□□ -1.07
BRCA1-214ENST00000477152 NCK2O43639 380 aa8.34□□□□□ -1.07
BRCA1-214ENST00000477152 UPP2O95045 317 aa8.34□□□□□ -1.07
BRCA1-214ENST00000477152 ZNF286BP0CG31 522 aa8.34□□□□□ -1.07
BRCA1-214ENST00000477152 CALM1P0DP23 149 aa8.34□□□□□ -1.07
BRCA1-214ENST00000477152 CALM2P0DP24 149 aa8.34□□□□□ -1.07
BRCA1-214ENST00000477152 CALM3P0DP25 149 aa8.34□□□□□ -1.07
BRCA1-214ENST00000477152 TIGD5Q53EQ6 642 aa8.34□□□□□ -1.07
BRCA1-214ENST00000477152 METTL7BQ6UX53 244 aa8.34□□□□□ -1.07
BRCA1-214ENST00000477152 TRIM46Q7Z4K8 759 aa8.34□□□□□ -1.07
BRCA1-214ENST00000477152 SERINC5Q86VE9 423 aa8.34□□□□□ -1.07
BRCA1-214ENST00000477152 FCHSD1Q86WN1 690 aa8.34□□□□□ -1.07
BRCA1-214ENST00000477152 FAM122AQ96E09 287 aa8.34□□□□□ -1.07
BRCA1-214ENST00000477152 MYO19Q96H55 970 aa8.34□□□□□ -1.07
BRCA1-214ENST00000477152 RFXAPO00287 272 aa8.33□□□□□ -1.08
BRCA1-214ENST00000477152 NBNO60934 754 aa8.33□□□□□ -1.08
BRCA1-214ENST00000477152 ICAM3P32942 547 aa8.33□□□□□ -1.08
BRCA1-214ENST00000477152 SEC23AQ15436 765 aa8.33□□□□□ -1.08
BRCA1-214ENST00000477152 RTN1Q16799 776 aa8.33□□□□□ -1.08
BRCA1-214ENST00000477152 ZNF618Q5T7W0 954 aa8.33□□□□□ -1.08
BRCA1-214ENST00000477152 TTC22Q5TAA0 569 aa8.33□□□□□ -1.08
BRCA1-214ENST00000477152 TEX2Q8IWB9 1127 aa8.33□□□□□ -1.08
BRCA1-214ENST00000477152 MYOCDQ8IZQ8 938 aa8.33□□□□□ -1.08
BRCA1-214ENST00000477152 PIGSQ96S52 555 aa8.33□□□□□ -1.08
BRCA1-214ENST00000477152 YME1L1Q96TA2 773 aa8.33□□□□□ -1.08
BRCA1-214ENST00000477152 SENP7Q9BQF6 1050 aa8.33□□□□□ -1.08
BRCA1-214ENST00000477152 MICAL3Q7RTP6 2002 aa8.33□□□□□ -1.08
BRCA1-214ENST00000477152 DDAH1O94760 285 aa8.33□□□□□ -1.08
BRCA1-214ENST00000477152 UBA1P22314 1058 aaKnown RBP8.33□□□□□ -1.08
BRCA1-214ENST00000477152 HOXA13P31271 388 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-214ENST00000477152 GPC1P35052 558 aa8.33□□□□□ -1.08
BRCA1-214ENST00000477152 TAF2Q6P1X5 1199 aa8.33□□□□□ -1.08
BRCA1-214ENST00000477152 SYNE3Q6ZMZ3 975 aa8.33□□□□□ -1.08
BRCA1-214ENST00000477152 NFXL1Q6ZNB6 911 aa8.33□□□□□ -1.08
BRCA1-214ENST00000477152 TMC7Q7Z402 723 aa8.33□□□□□ -1.08
BRCA1-214ENST00000477152 TET1Q8NFU7 2136 aa8.33□□□□□ -1.08
BRCA1-214ENST00000477152 DHX38Q92620 1227 aaKnown RBP8.33□□□□□ -1.08
BRCA1-214ENST00000477152 PPP2R3CQ969Q6 453 aa8.33□□□□□ -1.08
BRCA1-214ENST00000477152 VWCEQ96DN2 955 aa8.33□□□□□ -1.08
BRCA1-214ENST00000477152 IFT43Q96FT9 208 aa8.33□□□□□ -1.08
BRCA1-214ENST00000477152 HSH2DQ96JZ2 352 aa8.33□□□□□ -1.08
BRCA1-214ENST00000477152 COL4A4P53420 1690 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-214ENST00000477152 NRCAMQ92823 1304 aa8.32□□□□□ -1.08
BRCA1-214ENST00000477152 LINC01553A4QN01 128 aa8.32□□□□□ -1.08
BRCA1-214ENST00000477152 CCDC69A6NI79 296 aa8.32□□□□□ -1.08
BRCA1-214ENST00000477152 SPATA31C2B4DYI2 1134 aa8.32□□□□□ -1.08
BRCA1-214ENST00000477152 MAFGO15525 162 aa8.32□□□□□ -1.08
BRCA1-214ENST00000477152 IGHDP01880 384 aa8.32□□□□□ -1.08
BRCA1-214ENST00000477152 LGALS2P05162 132 aa8.32□□□□□ -1.08
BRCA1-214ENST00000477152 SMIM10L2AP0DMW4 78 aa8.32□□□□□ -1.08
BRCA1-214ENST00000477152 SMIM10L2BP0DMW5 78 aa8.32□□□□□ -1.08
BRCA1-214ENST00000477152 TFF2Q03403 129 aa8.32□□□□□ -1.08
BRCA1-214ENST00000477152 HSDL1Q3SXM5 330 aa8.32□□□□□ -1.08
BRCA1-214ENST00000477152 PLEKHG4Q58EX7 1191 aa8.32□□□□□ -1.08
BRCA1-214ENST00000477152 TMEM31Q5JXX7 168 aa8.32□□□□□ -1.08
BRCA1-214ENST00000477152 PCNX4Q63HM2 1172 aa8.32□□□□□ -1.08
BRCA1-214ENST00000477152 TMEM87BQ96K49 555 aa8.32□□□□□ -1.08
BRCA1-214ENST00000477152 SPZ1Q9BXG8 430 aa8.32□□□□□ -1.08
BRCA1-214ENST00000477152 LMAN2LQ9H0V9 348 aa8.32□□□□□ -1.08
BRCA1-214ENST00000477152 RALGAPA2Q2PPJ7 1873 aa8.32□□□□□ -1.08
BRCA1-214ENST00000477152 PTPRSQ13332 1948 aa8.32□□□□□ -1.08
BRCA1-214ENST00000477152 SPDYE3A6NKU9 549 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms