RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 PPP1R37O75864 691 aa15.96■□□□□ 0.15
COL4A6-206ENST00000477085 IGHA2P01877 340 aa15.96■□□□□ 0.15
COL4A6-206ENST00000477085 HOXC6P09630 235 aa15.96■□□□□ 0.15
COL4A6-206ENST00000477085 PLS3P13797 630 aa15.96■□□□□ 0.15
COL4A6-206ENST00000477085 PBX1P40424 430 aa15.96■□□□□ 0.15
COL4A6-206ENST00000477085 CCL14Q16627 93 aa15.96■□□□□ 0.15
COL4A6-206ENST00000477085 PRAMEF19Q5SWL8 479 aa15.96■□□□□ 0.15
COL4A6-206ENST00000477085 FAM178BQ8IXR5 827 aa15.96■□□□□ 0.15
COL4A6-206ENST00000477085 ZC3H3Q8IXZ2 948 aaKnown RBP15.96■□□□□ 0.15
COL4A6-206ENST00000477085 NIFKQ9BYG3 293 aaKnown RBP15.96■□□□□ 0.15
COL4A6-206ENST00000477085 SMPD1P17405 629 aa15.95■□□□□ 0.14
COL4A6-206ENST00000477085 EEF1GP26641 437 aaKnown RBP15.95■□□□□ 0.14
COL4A6-206ENST00000477085 CAP1Q01518 475 aa15.95■□□□□ 0.14
COL4A6-206ENST00000477085 SPAG1Q07617 926 aa15.95■□□□□ 0.14
COL4A6-206ENST00000477085 ACVR2BQ13705 512 aa15.95■□□□□ 0.14
COL4A6-206ENST00000477085 TARBP2Q15633 366 aaKnown RBP15.95■□□□□ 0.14
COL4A6-206ENST00000477085 MTERF2Q49AM1 385 aa15.95■□□□□ 0.14
COL4A6-206ENST00000477085 FAM102BQ5T8I3 360 aa15.95■□□□□ 0.14
COL4A6-206ENST00000477085 ZNF784Q8NCA9 323 aaPredicted RBP15.95■□□□□ 0.14
COL4A6-206ENST00000477085 BSNDQ8WZ55 320 aa15.95■□□□□ 0.14
COL4A6-206ENST00000477085 CNOT6LQ96LI5 555 aaKnown RBP15.95■□□□□ 0.14
COL4A6-206ENST00000477085 ARHGAP39Q9C0H5 1083 aa15.95■□□□□ 0.14
COL4A6-206ENST00000477085 TRAF3IP3Q9Y228 551 aa15.95■□□□□ 0.14
COL4A6-206ENST00000477085 LOXHD1Q8IVV2 1947 aa15.95■□□□□ 0.14
COL4A6-206ENST00000477085 RASSF10A6NK89 507 aa15.95■□□□□ 0.14
COL4A6-206ENST00000477085 EIF3DO15371 548 aaKnown RBP eCLIP15.95■□□□□ 0.14
COL4A6-206ENST00000477085 DEFB115Q30KQ5 88 aa15.95■□□□□ 0.14
COL4A6-206ENST00000477085 CACTINQ8WUQ7 758 aaKnown RBP15.95■□□□□ 0.14
COL4A6-206ENST00000477085 CCDC43Q96MW1 224 aaKnown RBP15.95■□□□□ 0.14
COL4A6-206ENST00000477085 CTAGE1Q96RT6 745 aa15.95■□□□□ 0.14
COL4A6-206ENST00000477085 TIPINQ9BVW5 301 aa15.95■□□□□ 0.14
COL4A6-206ENST00000477085 ZBTB42B2RXF5 422 aa15.94■□□□□ 0.14
COL4A6-206ENST00000477085 NOP56O00567 594 aaKnown RBP15.94■□□□□ 0.14
COL4A6-206ENST00000477085 DGAT1O75907 488 aa15.94■□□□□ 0.14
COL4A6-206ENST00000477085 CYP2B6P20813 491 aa15.94■□□□□ 0.14
COL4A6-206ENST00000477085 MARK3P27448 753 aa15.94■□□□□ 0.14
COL4A6-206ENST00000477085 FKBP3Q00688 224 aaKnown RBP15.94■□□□□ 0.14
COL4A6-206ENST00000477085 LRMPQ12912 555 aa15.94■□□□□ 0.14
COL4A6-206ENST00000477085 TBX2Q13207 712 aaPredicted RBP15.94■□□□□ 0.14
COL4A6-206ENST00000477085 MIIPQ5JXC2 388 aa15.94■□□□□ 0.14
COL4A6-206ENST00000477085 MSL3Q8N5Y2 521 aaKnown RBP15.94■□□□□ 0.14
COL4A6-206ENST00000477085 CAPNS2Q96L46 248 aa15.94■□□□□ 0.14
COL4A6-206ENST00000477085 DRC1Q96MC2 740 aa15.94■□□□□ 0.14
COL4A6-206ENST00000477085 TSG101Q99816 390 aa15.94■□□□□ 0.14
COL4A6-206ENST00000477085 TUBGCP2Q9BSJ2 902 aa15.94■□□□□ 0.14
COL4A6-206ENST00000477085 ABHD16BQ9H3Z7 469 aa15.94■□□□□ 0.14
COL4A6-206ENST00000477085 DHX33Q9H6R0 707 aaKnown RBP15.94■□□□□ 0.14
COL4A6-206ENST00000477085 DOCK3Q8IZD9 2030 aa15.94■□□□□ 0.14
COL4A6-206ENST00000477085 PCNTO95613 3336 aa15.93■□□□□ 0.14
COL4A6-206ENST00000477085 GOLGA6L6A8MZA4 724 aa15.93■□□□□ 0.14
COL4A6-206ENST00000477085 PDXKO00764 312 aa15.93■□□□□ 0.14
COL4A6-206ENST00000477085 N4BP3O15049 544 aa15.93■□□□□ 0.14
COL4A6-206ENST00000477085 KIF20AO95235 890 aa15.93■□□□□ 0.14
COL4A6-206ENST00000477085 MAPTP10636 758 aaKnown RBP15.93■□□□□ 0.14
COL4A6-206ENST00000477085 PEX3P56589 373 aa15.93■□□□□ 0.14
COL4A6-206ENST00000477085 NOGQ13253 232 aa15.93■□□□□ 0.14
COL4A6-206ENST00000477085 LAMC2Q13753 1193 aa15.93■□□□□ 0.14
COL4A6-206ENST00000477085 EDRF1Q3B7T1 1238 aa15.93■□□□□ 0.14
COL4A6-206ENST00000477085 FAM160B1Q5W0V3 765 aa15.93■□□□□ 0.14
COL4A6-206ENST00000477085 CEP135Q66GS9 1140 aa15.93■□□□□ 0.14
COL4A6-206ENST00000477085 ARMCX5Q6P1M9 558 aa15.93■□□□□ 0.14
COL4A6-206ENST00000477085 PLPPR4Q7Z2D5 763 aa15.93■□□□□ 0.14
COL4A6-206ENST00000477085 EMID1Q96A84 441 aaPredicted RBP15.93■□□□□ 0.14
COL4A6-206ENST00000477085 CREBZFQ9NS37 354 aa15.93■□□□□ 0.14
COL4A6-206ENST00000477085 LARSQ9P2J5 1176 aaKnown RBP15.93■□□□□ 0.14
COL4A6-206ENST00000477085 IMPACTQ9P2X3 320 aa15.93■□□□□ 0.14
COL4A6-206ENST00000477085 ARID2Q68CP9 1835 aa15.93■□□□□ 0.14
COL4A6-206ENST00000477085 EMSYQ7Z589 1322 aa15.93■□□□□ 0.14
COL4A6-206ENST00000477085 GH1P01241 217 aa15.92■□□□□ 0.14
COL4A6-206ENST00000477085 ZNF865P0CJ78 1059 aaPredicted RBP15.92■□□□□ 0.14
COL4A6-206ENST00000477085 CYP2C19P33261 490 aa15.92■□□□□ 0.14
COL4A6-206ENST00000477085 NPTX2P47972 431 aa15.92■□□□□ 0.14
COL4A6-206ENST00000477085 NCKAP1LP55160 1127 aa15.92■□□□□ 0.14
COL4A6-206ENST00000477085 GOLGA8FQ08AF8 430 aa15.92■□□□□ 0.14
COL4A6-206ENST00000477085 GOLGA8DPQ0D2H9 430 aa15.92■□□□□ 0.14
COL4A6-206ENST00000477085 ADAM9Q13443 819 aa15.92■□□□□ 0.14
COL4A6-206ENST00000477085 PLCB4Q15147 1175 aa15.92■□□□□ 0.14
COL4A6-206ENST00000477085 DUSP28Q4G0W2 176 aa15.92■□□□□ 0.14
COL4A6-206ENST00000477085 AFG1LQ8WV93 481 aa15.92■□□□□ 0.14
COL4A6-206ENST00000477085 GLG1Q92896 1179 aa15.92■□□□□ 0.14
COL4A6-206ENST00000477085 NTPCRQ9BSD7 190 aaKnown RBP15.92■□□□□ 0.14
COL4A6-206ENST00000477085 KIFC3Q9BVG8 833 aa15.92■□□□□ 0.14
COL4A6-206ENST00000477085 AZI2Q9H6S1 392 aa15.92■□□□□ 0.14
COL4A6-206ENST00000477085 TYW1Q9NV66 732 aaKnown RBP15.92■□□□□ 0.14
COL4A6-206ENST00000477085 SLC5A4Q9NY91 659 aa15.92■□□□□ 0.14
COL4A6-206ENST00000477085 MAGEC2Q9UBF1 373 aaPredicted RBP15.92■□□□□ 0.14
COL4A6-206ENST00000477085 ZHX1Q9UKY1 873 aaPredicted RBP15.92■□□□□ 0.14
COL4A6-206ENST00000477085 LGALS16A8MUM7 142 aa15.92■□□□□ 0.14
COL4A6-206ENST00000477085 K7ENM7 598 aa15.92■□□□□ 0.14
COL4A6-206ENST00000477085 TNPO2O14787 897 aaKnown RBP15.92■□□□□ 0.14
COL4A6-206ENST00000477085 SLC16A4O15374 487 aa15.92■□□□□ 0.14
COL4A6-206ENST00000477085 APLP1P51693 650 aa15.92■□□□□ 0.14
COL4A6-206ENST00000477085 GTF2BQ00403 316 aa15.92■□□□□ 0.14
COL4A6-206ENST00000477085 EMC2Q15006 297 aa15.92■□□□□ 0.14
COL4A6-206ENST00000477085 SPECC1LQ69YQ0 1117 aa15.92■□□□□ 0.14
COL4A6-206ENST00000477085 HAUS6Q7Z4H7 955 aa15.92■□□□□ 0.14
COL4A6-206ENST00000477085 LRRC8AQ8IWT6 810 aa15.92■□□□□ 0.14
COL4A6-206ENST00000477085 TMEM161BQ8NDZ6 487 aa15.92■□□□□ 0.14
COL4A6-206ENST00000477085 PPTC7Q8NI37 304 aa15.92■□□□□ 0.14
COL4A6-206ENST00000477085 TMEM143Q96AN5 459 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms