RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 SGSM2O43147 1006 aa5.15□□□□□ -1.59
VPS13D-207ENST00000476169 PCDHGA12O60330 932 aa5.15□□□□□ -1.59
VPS13D-207ENST00000476169 OFD1O75665 1012 aa5.15□□□□□ -1.59
VPS13D-207ENST00000476169 HPXP02790 462 aa5.15□□□□□ -1.59
VPS13D-207ENST00000476169 FURINP09958 794 aa5.15□□□□□ -1.59
VPS13D-207ENST00000476169 RAC2P15153 192 aa5.15□□□□□ -1.59
VPS13D-207ENST00000476169 PNLIPP16233 465 aa5.15□□□□□ -1.59
VPS13D-207ENST00000476169 SDHAP31040 664 aa5.15□□□□□ -1.59
VPS13D-207ENST00000476169 TRHRP34981 398 aaPredicted RBP5.15□□□□□ -1.59
VPS13D-207ENST00000476169 GDNFP39905 211 aa5.15□□□□□ -1.59
VPS13D-207ENST00000476169 GPR3P46089 330 aa5.15□□□□□ -1.59
VPS13D-207ENST00000476169 ERVFC1P60507 584 aa5.15□□□□□ -1.59
VPS13D-207ENST00000476169 GRIN1Q05586 938 aa5.15□□□□□ -1.59
VPS13D-207ENST00000476169 PDCD1Q15116 288 aa5.15□□□□□ -1.59
VPS13D-207ENST00000476169 TIGD5Q53EQ6 642 aa5.15□□□□□ -1.59
VPS13D-207ENST00000476169 XRRA1Q6P2D8 792 aa5.15□□□□□ -1.59
VPS13D-207ENST00000476169 TTLL7Q6ZT98 887 aa5.15□□□□□ -1.59
VPS13D-207ENST00000476169 TOGARAM2Q6ZUX3 1019 aa5.15□□□□□ -1.59
VPS13D-207ENST00000476169 MILR1Q7Z6M3 343 aa5.15□□□□□ -1.59
VPS13D-207ENST00000476169 PCGF5Q86SE9 256 aa5.15□□□□□ -1.59
VPS13D-207ENST00000476169 NME9Q86XW9 330 aa5.15□□□□□ -1.59
VPS13D-207ENST00000476169 SIRT2Q8IXJ6 389 aa5.15□□□□□ -1.59
VPS13D-207ENST00000476169 LILRA2Q8N149 483 aa5.15□□□□□ -1.59
VPS13D-207ENST00000476169 CLEC4DQ8WXI8 215 aa5.15□□□□□ -1.59
VPS13D-207ENST00000476169 ERCC4Q92889 916 aaPredicted RBP5.15□□□□□ -1.59
VPS13D-207ENST00000476169 PEX11GQ96HA9 241 aa5.15□□□□□ -1.59
VPS13D-207ENST00000476169 C16orf92Q96LL3 132 aa5.15□□□□□ -1.59
VPS13D-207ENST00000476169 NUP88Q99567 741 aaPredicted RBP5.15□□□□□ -1.59
VPS13D-207ENST00000476169 MYD88Q99836 296 aa5.15□□□□□ -1.59
VPS13D-207ENST00000476169 C19orf44Q9H6X5 657 aa5.15□□□□□ -1.59
VPS13D-207ENST00000476169 RXFP1Q9HBX9 757 aa5.15□□□□□ -1.59
VPS13D-207ENST00000476169 DNAJC28Q9NX36 388 aa5.15□□□□□ -1.59
VPS13D-207ENST00000476169 USP36Q9P275 1121 aaKnown RBP5.15□□□□□ -1.59
VPS13D-207ENST00000476169 KCNG1Q9UIX4 513 aa5.15□□□□□ -1.59
VPS13D-207ENST00000476169 PCDHGA9Q9Y5G4 932 aaKnown RBP5.15□□□□□ -1.59
VPS13D-207ENST00000476169 PCDHGA8Q9Y5G5 932 aa5.15□□□□□ -1.59
VPS13D-207ENST00000476169 PCDHGA7Q9Y5G6 932 aa5.15□□□□□ -1.59
VPS13D-207ENST00000476169 PCDHGA6Q9Y5G7 932 aa5.15□□□□□ -1.59
VPS13D-207ENST00000476169 PCDHGA3Q9Y5H0 932 aa5.15□□□□□ -1.59
VPS13D-207ENST00000476169 PCDHGA2Q9Y5H1 932 aa5.15□□□□□ -1.59
VPS13D-207ENST00000476169 ZC3H12DA2A288 527 aaKnown RBP5.14□□□□□ -1.59
VPS13D-207ENST00000476169 SRGAP3O43295 1099 aa5.14□□□□□ -1.59
VPS13D-207ENST00000476169 MMEP08473 750 aa5.14□□□□□ -1.59
VPS13D-207ENST00000476169 DBHP09172 617 aa5.14□□□□□ -1.59
VPS13D-207ENST00000476169 SSTR4P31391 388 aa5.14□□□□□ -1.59
VPS13D-207ENST00000476169 MAN1A1P33908 653 aa5.14□□□□□ -1.59
VPS13D-207ENST00000476169 GALK1P51570 392 aa5.14□□□□□ -1.59
VPS13D-207ENST00000476169 AK2P54819 239 aa5.14□□□□□ -1.59
VPS13D-207ENST00000476169 GJA9P57773 515 aa5.14□□□□□ -1.59
VPS13D-207ENST00000476169 ZNF280AP59817 542 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-207ENST00000476169 HTRA3P83110 453 aa5.14□□□□□ -1.59
VPS13D-207ENST00000476169 SNX17Q15036 470 aa5.14□□□□□ -1.59
VPS13D-207ENST00000476169 PLCL1Q15111 1095 aa5.14□□□□□ -1.59
VPS13D-207ENST00000476169 MAPRE1Q15691 268 aaKnown RBP5.14□□□□□ -1.59
VPS13D-207ENST00000476169 L1TD1Q5T7N2 865 aaKnown RBP5.14□□□□□ -1.59
VPS13D-207ENST00000476169 CXorf67Q86X51 503 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-207ENST00000476169 DTX1Q86Y01 620 aa5.14□□□□□ -1.59
VPS13D-207ENST00000476169 C7orf31Q8N865 590 aa5.14□□□□□ -1.59
VPS13D-207ENST00000476169 MYLIPQ8WY64 445 aa5.14□□□□□ -1.59
VPS13D-207ENST00000476169 ZNF496Q96IT1 587 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-207ENST00000476169 GBP4Q96PP9 640 aa5.14□□□□□ -1.59
VPS13D-207ENST00000476169 PAGR1Q9BTK6 254 aa5.14□□□□□ -1.59
VPS13D-207ENST00000476169 SLC12A5Q9H2X9 1139 aa5.14□□□□□ -1.59
VPS13D-207ENST00000476169 TNFRSF12AQ9NP84 129 aa5.14□□□□□ -1.59
VPS13D-207ENST00000476169 PAK6Q9NQU5 681 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-207ENST00000476169 KLHL11Q9NVR0 708 aa5.14□□□□□ -1.59
VPS13D-207ENST00000476169 C19orf73Q9NVV2 129 aa5.14□□□□□ -1.59
VPS13D-207ENST00000476169 DBR1Q9UK59 544 aaKnown RBP5.14□□□□□ -1.59
VPS13D-207ENST00000476169 PPP2R3BQ9Y5P8 575 aa5.14□□□□□ -1.59
VPS13D-207ENST00000476169 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-207ENST00000476169 F8W031 263 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-207ENST00000476169 ACOT7O00154 380 aa5.13□□□□□ -1.59
VPS13D-207ENST00000476169 PIP5K1CO60331 668 aa5.13□□□□□ -1.59
VPS13D-207ENST00000476169 MED26O95402 600 aa5.13□□□□□ -1.59
VPS13D-207ENST00000476169 CYBBP04839 570 aa5.13□□□□□ -1.59
VPS13D-207ENST00000476169 SETSIPP0DME0 302 aa5.13□□□□□ -1.59
VPS13D-207ENST00000476169 SPINK2P20155 84 aa5.13□□□□□ -1.59
VPS13D-207ENST00000476169 ENPP1P22413 925 aa5.13□□□□□ -1.59
VPS13D-207ENST00000476169 TRIM14Q14142 442 aa5.13□□□□□ -1.59
VPS13D-207ENST00000476169 GALEQ14376 348 aa5.13□□□□□ -1.59
VPS13D-207ENST00000476169 ZNF267Q14586 743 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-207ENST00000476169 SLC9A5Q14940 896 aa5.13□□□□□ -1.59
VPS13D-207ENST00000476169 RRP12Q5JTH9 1297 aaKnown RBP5.13□□□□□ -1.59
VPS13D-207ENST00000476169 PAQR3Q6TCH7 311 aa5.13□□□□□ -1.59
VPS13D-207ENST00000476169 CCDC149Q6ZUS6 474 aa5.13□□□□□ -1.59
VPS13D-207ENST00000476169 ESPNLQ6ZVH7 1005 aa5.13□□□□□ -1.59
VPS13D-207ENST00000476169 MYLK4Q86YV6 388 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-207ENST00000476169 ARRDC4Q8NCT1 418 aa5.13□□□□□ -1.59
VPS13D-207ENST00000476169 HIPK4Q8NE63 616 aa5.13□□□□□ -1.59
VPS13D-207ENST00000476169 TTLL11Q8NHH1 800 aa5.13□□□□□ -1.59
VPS13D-207ENST00000476169 POF1BQ8WVV4 589 aa5.13□□□□□ -1.59
VPS13D-207ENST00000476169 ASB15Q8WXK1 588 aa5.13□□□□□ -1.59
VPS13D-207ENST00000476169 TRIM63Q969Q1 353 aa5.13□□□□□ -1.59
VPS13D-207ENST00000476169 RUNDC1Q96C34 613 aa5.13□□□□□ -1.59
VPS13D-207ENST00000476169 TEKT5Q96M29 485 aa5.13□□□□□ -1.59
VPS13D-207ENST00000476169 CDC5LQ99459 802 aaKnown RBP5.13□□□□□ -1.59
VPS13D-207ENST00000476169 ANO3Q9BYT9 981 aa5.13□□□□□ -1.59
VPS13D-207ENST00000476169 RNF38Q9H0F5 515 aa5.13□□□□□ -1.59
VPS13D-207ENST00000476169 POFUT1Q9H488 388 aa5.13□□□□□ -1.59
VPS13D-207ENST00000476169 FAM204AQ9H8W3 233 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms