RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 MAN1A1P33908 653 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 KCNJ6P48051 423 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 CDKN1CP49918 316 aaPredicted RBP6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 GNAQP50148 359 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 ITIH3Q06033 890 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 BLMHQ13867 455 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 PDE3AQ14432 1141 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 RASA2Q15283 850 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 CCDC40Q4G0X9 1142 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 CFAP157Q5JU67 520 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 GALNT17Q6IS24 598 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 ZSCAN25Q6NSZ9 544 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 CRELD2Q6UXH1 353 aaPredicted RBP6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 ADAMTSL4Q6UY14 1074 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 WDR75Q8IWA0 830 aaKnown RBP6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 SYNPOQ8N3V7 929 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 SYT2Q8N9I0 419 aaPredicted RBP6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 MSANTD4Q8NCY6 345 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 SMARCC2Q8TAQ2 1214 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 KLHDC4Q8TBB5 520 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 CCDC110Q8TBZ0 833 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 MAIP1Q8WWC4 291 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 ABHD17AQ96GS6 310 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 CDHR1Q96JP9 859 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 VCPKMTQ9H867 229 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 NDFIP2Q9NV92 336 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 GALNT8Q9NY28 637 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 AATFQ9NY61 560 aaKnown RBP eCLIP6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 PLAAQ9Y263 795 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 SH3GLB1Q9Y371 365 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 SQORQ9Y6N5 450 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 ATP7AQ04656 1500 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 SPATA31D1Q6ZQQ2 1576 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 SAMD9LQ8IVG5 1584 aa6.57□□□□□ -1.36
ECHDC1-215ENST00000475319 STRCQ7RTU9 1775 aa6.56□□□□□ -1.36
ECHDC1-215ENST00000475319 SYCP2Q9BX26 1530 aa6.56□□□□□ -1.36
ECHDC1-215ENST00000475319 GPATCH8Q9UKJ3 1502 aaKnown RBP6.56□□□□□ -1.36
ECHDC1-215ENST00000475319 IQCA1LA6NCM1 817 aa6.56□□□□□ -1.36
ECHDC1-215ENST00000475319 TMEM247A6NEH6 219 aa6.56□□□□□ -1.36
ECHDC1-215ENST00000475319 TTC34A8MYJ7 566 aa6.56□□□□□ -1.36
ECHDC1-215ENST00000475319 H3BQF6 201 aa6.56□□□□□ -1.36
ECHDC1-215ENST00000475319 TADA3O75528 432 aa6.56□□□□□ -1.36
ECHDC1-215ENST00000475319 DNAJC8O75937 253 aaPredicted RBP6.56□□□□□ -1.36
ECHDC1-215ENST00000475319 GHRHP01286 108 aa6.56□□□□□ -1.36
ECHDC1-215ENST00000475319 FAM153BP0C7A2 387 aa6.56□□□□□ -1.36
ECHDC1-215ENST00000475319 ENDOUP21128 410 aaKnown RBP6.56□□□□□ -1.36
ECHDC1-215ENST00000475319 HOXD12P35452 270 aa6.56□□□□□ -1.36
ECHDC1-215ENST00000475319 CDK8P49336 464 aa6.56□□□□□ -1.36
ECHDC1-215ENST00000475319 PMS2P54278 862 aa6.56□□□□□ -1.36
ECHDC1-215ENST00000475319 ZNF252P-AS1Q0IIN9 211 aa6.56□□□□□ -1.36
ECHDC1-215ENST00000475319 CCDC153Q494R4 210 aa6.56□□□□□ -1.36
ECHDC1-215ENST00000475319 CCDC14Q49A88 953 aa6.56□□□□□ -1.36
ECHDC1-215ENST00000475319 KAZNQ674X7 775 aa6.56□□□□□ -1.36
ECHDC1-215ENST00000475319 VN1R5Q7Z5H4 357 aa6.56□□□□□ -1.36
ECHDC1-215ENST00000475319 SLC15A3Q8IY34 581 aa6.56□□□□□ -1.36
ECHDC1-215ENST00000475319 ZSWIM2Q8NEG5 633 aa6.56□□□□□ -1.36
ECHDC1-215ENST00000475319 AFAP1L1Q8TED9 768 aa6.56□□□□□ -1.36
ECHDC1-215ENST00000475319 CACTINQ8WUQ7 758 aaKnown RBP6.56□□□□□ -1.36
ECHDC1-215ENST00000475319 TBC1D31Q96DN5 1066 aa6.56□□□□□ -1.36
ECHDC1-215ENST00000475319 SNX27Q96L92 541 aa6.56□□□□□ -1.36
ECHDC1-215ENST00000475319 TM9SF2Q99805 663 aa6.56□□□□□ -1.36
ECHDC1-215ENST00000475319 IGFLR1Q9H665 355 aa6.56□□□□□ -1.36
ECHDC1-215ENST00000475319 EBF2Q9HAK2 575 aa6.56□□□□□ -1.36
ECHDC1-215ENST00000475319 MIS18AQ9NYP9 233 aa6.56□□□□□ -1.36
ECHDC1-215ENST00000475319 WDR35Q9P2L0 1181 aa6.56□□□□□ -1.36
ECHDC1-215ENST00000475319 MYO1AQ9UBC5 1043 aa6.56□□□□□ -1.36
ECHDC1-215ENST00000475319 ATXN7L1Q9ULK2 861 aaPredicted RBP6.56□□□□□ -1.36
ECHDC1-215ENST00000475319 KIDINS220Q9ULH0 1771 aa6.56□□□□□ -1.36
ECHDC1-215ENST00000475319 SUPT6HQ7KZ85 1726 aaKnown RBP6.56□□□□□ -1.36
ECHDC1-215ENST00000475319 LRRD1A4D1F6 860 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 ANKRD65E5RJM6 399 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 C2CD2LO14523 706 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 MEFVO15553 781 aaPredicted RBP6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 EIF2AK2P19525 551 aaKnown RBP6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 POU3F3P20264 500 aaPredicted RBP6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 S100A1P23297 94 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 MLH1P40692 756 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 PIK3CAP42336 1068 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 ACTN3Q08043 901 aaPredicted RBP6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 TMEM62Q0P6H9 643 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 IKQ13123 557 aaPredicted RBP6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 TUBA3CQ13748 450 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 LRRFIP1Q32MZ4 808 aaKnown RBP6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 TMEM67Q5HYA8 995 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 CFAP58Q5T655 872 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 NXNQ6DKJ4 435 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 CCDC121Q6ZUS5 278 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 EEPD1Q7L9B9 569 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 MAATS1Q7Z4T9 603 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 DCLK2Q8N568 766 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 RNF10Q8N5U6 811 aaKnown RBP6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 ESX1Q8N693 406 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 LEO1Q8WVC0 666 aaPredicted RBP6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 RABGGTAQ92696 567 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 ZNF669Q96BR6 464 aaPredicted RBP6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 CLIP3Q96DZ5 547 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 NR1H4Q96RI1 486 aaPredicted RBP6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 HAUS7Q99871 368 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 EMILIN2Q9BXX0 1053 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms