RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 CPA1P15085 419 aa28.24■■■□□ 2.11
TMEM54-205ENST00000475208 APOBRQ0VD83 1088 aa28.24■■■□□ 2.11
TMEM54-205ENST00000475208 MCTP2Q6DN12 878 aa28.24■■■□□ 2.11
TMEM54-205ENST00000475208 SMAP1Q8IYB5 467 aaPredicted RBP28.24■■■□□ 2.11
TMEM54-205ENST00000475208 METTL13Q8N6R0 699 aa28.24■■■□□ 2.11
TMEM54-205ENST00000475208 C6orf50Q9HD87 102 aa28.24■■■□□ 2.11
TMEM54-205ENST00000475208 TLR9Q9NR96 1032 aa28.24■■■□□ 2.11
TMEM54-205ENST00000475208 GPR32O75388 356 aa28.23■■■□□ 2.11
TMEM54-205ENST00000475208 CDC45O75419 566 aa28.23■■■□□ 2.11
TMEM54-205ENST00000475208 FGF18O76093 207 aa28.23■■■□□ 2.11
TMEM54-205ENST00000475208 PSAPP07602 524 aa28.23■■■□□ 2.11
TMEM54-205ENST00000475208 FGFR1P11362 822 aa28.23■■■□□ 2.11
TMEM54-205ENST00000475208 THNSL1Q8IYQ7 743 aa28.23■■■□□ 2.11
TMEM54-205ENST00000475208 COLGALT1Q8NBJ5 622 aa28.23■■■□□ 2.11
TMEM54-205ENST00000475208 CCDC12Q8WUD4 166 aaPredicted RBP28.23■■■□□ 2.11
TMEM54-205ENST00000475208 ATP6V0A4Q9HBG4 840 aa28.23■■■□□ 2.11
TMEM54-205ENST00000475208 TYW1Q9NV66 732 aaKnown RBP28.23■■■□□ 2.11
TMEM54-205ENST00000475208 TMEM161AQ9NX61 479 aa28.23■■■□□ 2.11
TMEM54-205ENST00000475208 GABBR1Q9UBS5 961 aa28.23■■■□□ 2.11
TMEM54-205ENST00000475208 USP15Q9Y4E8 981 aaPredicted RBP28.23■■■□□ 2.11
TMEM54-205ENST00000475208 PCDHA10Q9Y5I2 948 aa28.23■■■□□ 2.11
TMEM54-205ENST00000475208 CLCN3P51790 818 aa28.22■■■□□ 2.11
TMEM54-205ENST00000475208 PRR16Q569H4 304 aa28.22■■■□□ 2.11
TMEM54-205ENST00000475208 ALYREFQ86V81 257 aaKnown RBP28.22■■■□□ 2.11
TMEM54-205ENST00000475208 FBXL18Q96ME1 805 aa28.22■■■□□ 2.11
TMEM54-205ENST00000475208 CEP131Q9UPN4 1083 aa28.22■■■□□ 2.11
TMEM54-205ENST00000475208 MYH9P35579 1960 aaKnown RBP28.22■■■□□ 2.11
TMEM54-205ENST00000475208 TRIOO75962 3097 aa28.22■■■□□ 2.11
TMEM54-205ENST00000475208 PER2O15055 1255 aa28.21■■■□□ 2.11
TMEM54-205ENST00000475208 DSC3Q14574 896 aa28.21■■■□□ 2.11
TMEM54-205ENST00000475208 PKN1Q16512 942 aa28.21■■■□□ 2.11
TMEM54-205ENST00000475208 Q6ZUG5 572 aa28.21■■■□□ 2.11
TMEM54-205ENST00000475208 BRF1Q92994 677 aa28.21■■■□□ 2.11
TMEM54-205ENST00000475208 KCNH6Q9H252 994 aa28.21■■■□□ 2.11
TMEM54-205ENST00000475208 CWH43Q9H720 699 aa28.21■■■□□ 2.11
TMEM54-205ENST00000475208 ELAC1Q9H777 363 aaKnown RBP28.21■■■□□ 2.11
TMEM54-205ENST00000475208 LAG3P18627 525 aa28.2■■■□□ 2.1
TMEM54-205ENST00000475208 GNA11P29992 359 aa28.2■■■□□ 2.1
TMEM54-205ENST00000475208 ERVFC1P60507 584 aa28.2■■■□□ 2.1
TMEM54-205ENST00000475208 FAM189BP81408 668 aa28.2■■■□□ 2.1
TMEM54-205ENST00000475208 RBM10P98175 930 aaKnown RBP28.2■■■□□ 2.1
TMEM54-205ENST00000475208 DUSP6Q16828 381 aa28.2■■■□□ 2.1
TMEM54-205ENST00000475208 RASGRP4Q8TDF6 673 aa28.2■■■□□ 2.1
TMEM54-205ENST00000475208 EDAQ92838 391 aa28.2■■■□□ 2.1
TMEM54-205ENST00000475208 FAM167AQ96KS9 214 aa28.2■■■□□ 2.1
TMEM54-205ENST00000475208 MFSD14AQ96MC6 490 aa28.2■■■□□ 2.1
TMEM54-205ENST00000475208 SAMM50Q9Y512 469 aa28.2■■■□□ 2.1
TMEM54-205ENST00000475208 NID2Q14112 1375 aa28.2■■■□□ 2.1
TMEM54-205ENST00000475208 ZNF318Q5VUA4 2279 aa28.19■■■□□ 2.1
TMEM54-205ENST00000475208 LOC730098B7Z3J9 87 aa28.19■■■□□ 2.1
TMEM54-205ENST00000475208 MAGEB2O15479 319 aa28.19■■■□□ 2.1
TMEM54-205ENST00000475208 PRPF3O43395 683 aaKnown RBP28.19■■■□□ 2.1
TMEM54-205ENST00000475208 NHLH1Q02575 133 aa28.19■■■□□ 2.1
TMEM54-205ENST00000475208 CENPQQ7L2Z9 268 aaPredicted RBP28.19■■■□□ 2.1
TMEM54-205ENST00000475208 VN1R2Q8NFZ6 395 aa28.19■■■□□ 2.1
TMEM54-205ENST00000475208 JAKMIP1Q96N16 626 aaKnown RBP28.19■■■□□ 2.1
TMEM54-205ENST00000475208 MAP7D2Q96T17 732 aa28.19■■■□□ 2.1
TMEM54-205ENST00000475208 CDCA3Q99618 268 aaPredicted RBP28.19■■■□□ 2.1
TMEM54-205ENST00000475208 AKT3Q9Y243 479 aa28.19■■■□□ 2.1
TMEM54-205ENST00000475208 TECTAO75443 2155 aa28.18■■■□□ 2.1
TMEM54-205ENST00000475208 FSD2A1L4K1 749 aa28.18■■■□□ 2.1
TMEM54-205ENST00000475208 FSCN2O14926 492 aa28.18■■■□□ 2.1
TMEM54-205ENST00000475208 CIITAP33076 1130 aa28.18■■■□□ 2.1
TMEM54-205ENST00000475208 PDE12Q6L8Q7 609 aaKnown RBP28.18■■■□□ 2.1
TMEM54-205ENST00000475208 PHKBQ93100 1093 aa28.18■■■□□ 2.1
TMEM54-205ENST00000475208 LENG9Q96B70 501 aa28.18■■■□□ 2.1
TMEM54-205ENST00000475208 PHF7Q9BWX1 381 aaPredicted RBP28.18■■■□□ 2.1
TMEM54-205ENST00000475208 TMEM117Q9H0C3 514 aa28.18■■■□□ 2.1
TMEM54-205ENST00000475208 WDR64B1ANS9 1081 aa28.17■■■□□ 2.1
TMEM54-205ENST00000475208 NLRP11P59045 1033 aaKnown RBP28.17■■■□□ 2.1
TMEM54-205ENST00000475208 AKAP17AQ02040 695 aaKnown RBP28.17■■■□□ 2.1
TMEM54-205ENST00000475208 PLPP4Q5VZY2 271 aa28.17■■■□□ 2.1
TMEM54-205ENST00000475208 EFCAB12Q6NXP0 572 aa28.17■■■□□ 2.1
TMEM54-205ENST00000475208 LRRC71Q8N4P6 559 aa28.17■■■□□ 2.1
TMEM54-205ENST00000475208 LINC01465Q8N7H1 131 aa28.17■■■□□ 2.1
TMEM54-205ENST00000475208 KCNB2Q92953 911 aa28.17■■■□□ 2.1
TMEM54-205ENST00000475208 WDFY4Q6ZS81 3184 aa28.17■■■□□ 2.1
TMEM54-205ENST00000475208 HOXA2O43364 376 aa28.16■■■□□ 2.1
TMEM54-205ENST00000475208 TMOD1P28289 359 aa28.16■■■□□ 2.1
TMEM54-205ENST00000475208 CBX2Q14781 532 aaPredicted RBP28.16■■■□□ 2.1
TMEM54-205ENST00000475208 BLOC1S2Q6QNY1 142 aa28.16■■■□□ 2.1
TMEM54-205ENST00000475208 BICD2Q8TD16 824 aa28.16■■■□□ 2.1
TMEM54-205ENST00000475208 MRPS27Q92552 414 aaKnown RBP28.16■■■□□ 2.1
TMEM54-205ENST00000475208 CASD1Q96PB1 797 aa28.16■■■□□ 2.1
TMEM54-205ENST00000475208 ADAMTS10Q9H324 1103 aa28.16■■■□□ 2.1
TMEM54-205ENST00000475208 RNF19AQ9NV58 838 aa28.16■■■□□ 2.1
TMEM54-205ENST00000475208 LZTS1Q9Y250 596 aa28.16■■■□□ 2.1
TMEM54-205ENST00000475208 ZNF862O60290 1169 aa28.15■■■□□ 2.1
TMEM54-205ENST00000475208 OATP04181 439 aa28.15■■■□□ 2.1
TMEM54-205ENST00000475208 PLCB3Q01970 1234 aa28.15■■■□□ 2.1
TMEM54-205ENST00000475208 CCDC148Q8NFR7 591 aa28.15■■■□□ 2.1
TMEM54-205ENST00000475208 RPGRIP1Q96KN7 1286 aa28.15■■■□□ 2.1
TMEM54-205ENST00000475208 DISC1Q9NRI5 854 aa28.15■■■□□ 2.1
TMEM54-205ENST00000475208 TMEM221A6NGB7 291 aa28.14■■■□□ 2.1
TMEM54-205ENST00000475208 M0R296 226 aa28.14■■■□□ 2.1
TMEM54-205ENST00000475208 ZSCAN20P17040 1043 aaPredicted RBP28.14■■■□□ 2.1
TMEM54-205ENST00000475208 EIF4BP23588 611 aaKnown RBP28.14■■■□□ 2.1
TMEM54-205ENST00000475208 MRE11P49959 708 aa28.14■■■□□ 2.1
TMEM54-205ENST00000475208 PRKCEQ02156 737 aa28.14■■■□□ 2.1
TMEM54-205ENST00000475208 LRRC55Q6ZSA7 311 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms