RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 MPHOSPH6Q99547 160 aaKnown RBP23.87■■□□□ 1.41
CCM2-206ENST00000474617 LSM14BQ9BX40 385 aaKnown RBP23.87■■□□□ 1.41
CCM2-206ENST00000474617 AIPL1Q9NZN9 384 aa23.87■■□□□ 1.41
CCM2-206ENST00000474617 REXO2Q9Y3B8 237 aaKnown RBP23.87■■□□□ 1.41
CCM2-206ENST00000474617 A0A0G2JLL6 359 aaPredicted RBP23.86■■□□□ 1.41
CCM2-206ENST00000474617 LRRC53A6NM62 1247 aa23.86■■□□□ 1.41
CCM2-206ENST00000474617 SPATA31C2B4DYI2 1134 aa23.86■■□□□ 1.41
CCM2-206ENST00000474617 EIF3JO75822 258 aaKnown RBP23.86■■□□□ 1.41
CCM2-206ENST00000474617 AKAP3O75969 853 aa23.86■■□□□ 1.41
CCM2-206ENST00000474617 NMT1P30419 496 aaKnown RBP23.86■■□□□ 1.41
CCM2-206ENST00000474617 STXBP2Q15833 593 aa23.86■■□□□ 1.41
CCM2-206ENST00000474617 EXOC3L4Q17RC7 722 aa23.86■■□□□ 1.41
CCM2-206ENST00000474617 PRRT2Q7Z6L0 340 aaPredicted RBP23.86■■□□□ 1.41
CCM2-206ENST00000474617 FAM186BQ8IYM0 893 aa23.86■■□□□ 1.41
CCM2-206ENST00000474617 JAKMIP2Q96AA8 810 aa23.86■■□□□ 1.41
CCM2-206ENST00000474617 AGPAT3Q9NRZ7 376 aa23.86■■□□□ 1.41
CCM2-206ENST00000474617 EXOC7Q9UPT5 735 aa23.86■■□□□ 1.41
CCM2-206ENST00000474617 H0YCG3 227 aa23.85■■□□□ 1.41
CCM2-206ENST00000474617 IRF6O14896 467 aa23.85■■□□□ 1.41
CCM2-206ENST00000474617 KCNA2P16389 499 aa23.85■■□□□ 1.41
CCM2-206ENST00000474617 RTP1P59025 263 aa23.85■■□□□ 1.41
CCM2-206ENST00000474617 CCDC122Q5T0U0 273 aa23.85■■□□□ 1.41
CCM2-206ENST00000474617 DAW1Q8N136 415 aa23.85■■□□□ 1.41
CCM2-206ENST00000474617 SMCR8Q8TEV9 937 aaPredicted RBP23.85■■□□□ 1.41
CCM2-206ENST00000474617 KIFAP3Q92845 792 aa23.85■■□□□ 1.41
CCM2-206ENST00000474617 VTI1AQ96AJ9 217 aa23.85■■□□□ 1.41
CCM2-206ENST00000474617 BORCS6Q96GS4 357 aa23.85■■□□□ 1.41
CCM2-206ENST00000474617 JPH1Q9HDC5 661 aaPredicted RBP23.85■■□□□ 1.41
CCM2-206ENST00000474617 PKD2L1Q9P0L9 805 aa23.85■■□□□ 1.41
CCM2-206ENST00000474617 CDC23Q9UJX2 597 aa23.85■■□□□ 1.41
CCM2-206ENST00000474617 MYH11P35749 1972 aa23.85■■□□□ 1.41
CCM2-206ENST00000474617 PTPRFP10586 1907 aa23.85■■□□□ 1.41
CCM2-206ENST00000474617 ATP8B3O60423 1300 aa23.85■■□□□ 1.41
CCM2-206ENST00000474617 ANO9A1A5B4 782 aa23.84■■□□□ 1.41
CCM2-206ENST00000474617 RBAK-RBAKDNI3L0D1 243 aa23.84■■□□□ 1.41
CCM2-206ENST00000474617 K7ENM7 598 aa23.84■■□□□ 1.41
CCM2-206ENST00000474617 RFX1P22670 979 aa23.84■■□□□ 1.41
CCM2-206ENST00000474617 SMTNP53814 917 aa23.84■■□□□ 1.41
CCM2-206ENST00000474617 HERVK_113P62684 666 aa23.84■■□□□ 1.41
CCM2-206ENST00000474617 HSP90AA2PQ14568 343 aaPredicted RBP23.84■■□□□ 1.41
CCM2-206ENST00000474617 WHAMMP3Q1A5X7 153 aa23.84■■□□□ 1.41
CCM2-206ENST00000474617 C10orf76Q5T2E6 689 aa23.84■■□□□ 1.41
CCM2-206ENST00000474617 SYCP3Q8IZU3 236 aa23.84■■□□□ 1.41
CCM2-206ENST00000474617 ZNF710Q8N1W2 664 aa23.84■■□□□ 1.41
CCM2-206ENST00000474617 UBXN4Q92575 508 aa23.84■■□□□ 1.41
CCM2-206ENST00000474617 SLC35C1Q96A29 364 aa23.84■■□□□ 1.41
CCM2-206ENST00000474617 ZFP91Q96JP5 570 aaPredicted RBP23.84■■□□□ 1.41
CCM2-206ENST00000474617 SPDYE5A6NIY4 337 aa23.84■■□□□ 1.41
CCM2-206ENST00000474617 ZBTB39O15060 712 aa23.84■■□□□ 1.41
CCM2-206ENST00000474617 NKRFO15226 690 aaKnown RBP eCLIP23.84■■□□□ 1.41
CCM2-206ENST00000474617 AKR1B10O60218 316 aa23.84■■□□□ 1.41
CCM2-206ENST00000474617 N4BP1O75113 896 aaKnown RBP23.84■■□□□ 1.41
CCM2-206ENST00000474617 NOL4O94818 638 aa23.84■■□□□ 1.41
CCM2-206ENST00000474617 SLC25A27O95847 323 aa23.84■■□□□ 1.41
CCM2-206ENST00000474617 CCNE2O96020 404 aa23.84■■□□□ 1.41
CCM2-206ENST00000474617 KIF11P52732 1056 aa23.84■■□□□ 1.41
CCM2-206ENST00000474617 GTF2BQ00403 316 aa23.84■■□□□ 1.41
CCM2-206ENST00000474617 MIS18BP1Q6P0N0 1132 aa23.84■■□□□ 1.41
CCM2-206ENST00000474617 MCPH1Q8NEM0 835 aa23.84■■□□□ 1.41
CCM2-206ENST00000474617 PURBQ96QR8 312 aaKnown RBP23.84■■□□□ 1.41
CCM2-206ENST00000474617 GANQ9H2C0 597 aa23.84■■□□□ 1.41
CCM2-206ENST00000474617 ARHGAP20Q9P2F6 1191 aa23.84■■□□□ 1.41
CCM2-206ENST00000474617 SLC9A2Q9UBY0 812 aa23.84■■□□□ 1.41
CCM2-206ENST00000474617 KCNH4Q9UQ05 1017 aa23.84■■□□□ 1.41
CCM2-206ENST00000474617 POLR2AP24928 1970 aaKnown RBP23.83■■□□□ 1.41
CCM2-206ENST00000474617 LOC102724159A0A0B4J2E5 919 aa23.83■■□□□ 1.41
CCM2-206ENST00000474617 SFI1A8K8P3 1242 aa23.83■■□□□ 1.41
CCM2-206ENST00000474617 EPHB6O15197 1021 aa23.83■■□□□ 1.41
CCM2-206ENST00000474617 FANCGO15287 622 aa23.83■■□□□ 1.41
CCM2-206ENST00000474617 ATP9AO75110 1047 aa23.83■■□□□ 1.41
CCM2-206ENST00000474617 NCKAP1LP55160 1127 aa23.83■■□□□ 1.41
CCM2-206ENST00000474617 ENPEPQ07075 957 aa23.83■■□□□ 1.41
CCM2-206ENST00000474617 PPIL2Q13356 520 aa23.83■■□□□ 1.41
CCM2-206ENST00000474617 PLS1Q14651 629 aa23.83■■□□□ 1.41
CCM2-206ENST00000474617 PWP2Q15269 919 aaKnown RBP23.83■■□□□ 1.41
CCM2-206ENST00000474617 SPIRE2Q8WWL2 714 aa23.83■■□□□ 1.41
CCM2-206ENST00000474617 SYT17Q9BSW7 474 aa23.83■■□□□ 1.41
CCM2-206ENST00000474617 IFIH1Q9BYX4 1025 aaKnown RBP23.83■■□□□ 1.41
CCM2-206ENST00000474617 P4HA2O15460 535 aa23.82■■□□□ 1.4
CCM2-206ENST00000474617 PJA2O43164 708 aa23.82■■□□□ 1.4
CCM2-206ENST00000474617 TADA3O75528 432 aa23.82■■□□□ 1.4
CCM2-206ENST00000474617 MCCD1P59942 119 aaPredicted RBP23.82■■□□□ 1.4
CCM2-206ENST00000474617 POLR2FP61218 127 aaKnown RBP23.82■■□□□ 1.4
CCM2-206ENST00000474617 IRX3P78415 501 aaPredicted RBP23.82■■□□□ 1.4
CCM2-206ENST00000474617 XKR9Q5GH70 373 aa23.82■■□□□ 1.4
CCM2-206ENST00000474617 C9orf131Q5VYM1 1079 aa23.82■■□□□ 1.4
CCM2-206ENST00000474617 INTS8Q75QN2 995 aaKnown RBP23.82■■□□□ 1.4
CCM2-206ENST00000474617 FASTKD5Q7L8L6 764 aaKnown RBP23.82■■□□□ 1.4
CCM2-206ENST00000474617 ANKRD35Q8N283 1001 aa23.82■■□□□ 1.4
CCM2-206ENST00000474617 SLC35F6Q8N357 371 aa23.82■■□□□ 1.4
CCM2-206ENST00000474617 TRIM58Q8NG06 486 aa23.82■■□□□ 1.4
CCM2-206ENST00000474617 GTF3C2Q8WUA4 911 aaPredicted RBP23.82■■□□□ 1.4
CCM2-206ENST00000474617 KCNN1Q92952 543 aa23.82■■□□□ 1.4
CCM2-206ENST00000474617 OTOFQ9HC10 1997 aa23.82■■□□□ 1.4
CCM2-206ENST00000474617 DGAT1O75907 488 aa23.81■■□□□ 1.4
CCM2-206ENST00000474617 EIF4A3P38919 411 aaKnown RBP23.81■■□□□ 1.4
CCM2-206ENST00000474617 ASTE1Q2TB18 679 aaPredicted RBP23.81■■□□□ 1.4
CCM2-206ENST00000474617 RNF10Q8N5U6 811 aaKnown RBP23.81■■□□□ 1.4
CCM2-206ENST00000474617 NTPCRQ9BSD7 190 aaKnown RBP23.81■■□□□ 1.4
CCM2-206ENST00000474617 GUCA1BQ9UMX6 200 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms